Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_032362435.1
Location
JAUMHM010000078.1:24964324-25012231[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-17 3.5e-14 54.4 0.1 1 45 426 471 426 471 0.96
2 2 1.1e-17 1.1e-14 56.1 0.0 1 43 840 883 840 885 0.95

Sequence Information

Coding Sequence
ATGGGCCGTAGGAGATGGAAGCAATACCAGGACACGGTGTACACCGGGACTCGCAGCGAATCGTCAACGACGACGCAGCAACAACAAGCCCTTCATCAGAGGCTATACCCAACACCGCCAGGCTGCAACCCCAATGCAGCTGCTTTGAACCAGGTGGCTCACCTGCGTCCCCAGGTGCTGCCAGCTCAGATCAAACAAGAGCTGCTAATTCCCAAAAACCTCTCGAATCACCATCCCACGCAGGAGGACCAACAGGACCATCTAGAGCAACGGCACCAGGAGGAGTCGAATTGTGCCAAGGTCGAAGTCGAGAATTCGGAGGTCGGAATCCAGGACTCCAGGACCGAAACGACCACCACTACGACGGTAACGACCAACAATACGAATTCTACGGCTGTGAAGAGACGAAATCGAGGAGACGACGAGAACAGAAACGAGGAGGAGGACGAAGAGGACGAAGCAGAAAAGAGGCTCAAGCCCAACGAGCAAAACGACAGGTCCACCAATTACCTCAACGAGAACGAACGAACCTCCAAAGAAGAGGATCCGACCAAACCCAACGACACGGAAGGGACCAAGGAACGGATAGAGGGAGTCGCGTTGGAACGAATACAGGTGACACAGGGTTTGTTGAGGGTAAAAAAGGAGGAGGACCTTCAGGAGGCGCCAGTTCCTGGCAGTGGATTAAATTCGACCTCTGCAGCGACAACCAACTCGCTATCAGCGACCAAGGAAAAGGAAGTGATCCCAGAAAACGTGTTCCTTGGAAATCGGATAGCGAGTCCTCCACCGGAAGATTGGAAGCCGTTGGACAAGTGTTACTTCTGTCTCGATGGCAAGCTGCCACACGACGACCAGGCGCCCCTTAGTCCTCAGAGCGACAGCAGCAGCAGTTCTCGATCAGCAGAGTCTCCGATGTCAGTTCAGGTCGACCCCATGGCGGCATCCGTGGTGGCAGCCGCTCTTGGCACGTACCCAACATTACTGCCACAATGGTGTCTACCACCGAGGGAGGCACCCCACGTCAACGTGCAAGCTCACCAGGATAATGCATCGGGAGCCGATCAACCCCTTGATCTCTCGGCCAAGCCCAAAAATTCTCAGGACAACAACATATCCTTGTTGGaacaacaaaaaatacctctgCGAATGCCGGCAGGACTAGACCCTAAGACGATATTCAAttcCTGTTATCGGGCGAAACCAAGGTTGACTGGTCCAGCAGGTGTTGGTGGTGTTTCAGTGGTGGGCGCTGGCGGTGGTAGGAGGACTTACACTGAGGAGGAGCTGCAGGCAGCCCTGAGGGACATTCAGAGCGGAAAACTAGGGACCCGTAGGGCAGCAGTCATCTATGGAATTCCCAGGAGCACCCTTCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGATGCGTCCCTCACAAACACCATTTCACACCCTCACGAGTTTGGTGTTCCAGCCGCCACGATTACAACTACCACCTCCACCACCACCACTacagcaacaacaacaacaacaccAAATACGACCCAAAATGCCTCTGCAATCACTCCGCCCTCGCAAGTGGATGAGgCGGACGAAAAGGAACTCTCAGGTGCTGAGGAAGAAAAGGAGGTGGAGAAGGCGTTGCTGAAACCTTTGCTCTCTCTTGAGGACCTGGTCAGGTTTTCGGCCCTTGAAGGAAGTGGTGGAGATTCCTTAAGGACTCTTTTGCAACGAGGACAGGAAACGGGGACCGAGTGGCCTGGTTTTGAGCATGCGAACATCGGTCCTTACATCCAGAAAATGTTGGCTGCTGCAACACCCTTTAAAGGGCTCGCAGAGTCGCAGGACTATCGGATTCCCGAGGTGATGAGGAGGTTGATGAGCGAGGACAAGAGGCTGAGTAAAGACGTGAATGGTGATCAATCCGGCAACCACCAGCAACAAGcccaacaacaaaataattctcaGCAACAGCAACGTGGCCCGATGACGAATGATGACTTCAATCCGAGCATCGAGGAGGAGGGCGCTGACAGTGGTCAGGGCAGAGCTATACTAAAAATTCCGTCCTACAAACCGGCAAATGCGCCGGGTTCCAGTAAGAATGGCGAGCCGAACTCGGCTGCCTTTGCACAGGGTTTCGCTGCAGGAAGCGGCACTGTTGCCGGAAGTCCCGGTTTAATGGAGCGCTCGAGTCCCGCATTTTCCGGCACCAGTAGTCCCACGAATTCTTTGGTAGGCAAAGGTGTGGGTGTCAACTTCCGCGACGTCATCGCAAAGAGCATAAGTGTCAAGTTCCAAGAGGGTCAGTCGCCAGGAGGAATGCAAGGTCAGGGTGGACTCTCCCAGTCGCCTCAGTCGATGATGAGCGAGTCGAATCCCTTCAAAAGGGGTCGTTACACGCCTCCTCAAACGACTCAGCAGCAACAACAGAAGCAACAACAGTCTCAATCTCAAGACAAGCAAGGAAAGCCGGGAACTGGAGGCAAGGGCACAAGACCTAAACGAGGAAAATATCGAAATTACGATCGAGATAGTCTTGTTGAGGCTGTACGAGCTGTGCAGAGAGGAGAAATGAGTGTTCATCGAGCTGGAAGCTACTACGGGGTTCCACATTCCACTCTCGAGTATAAAGTCAAGGAGAGGCATCTTATGAGGCCAAGAAAAAGAGATCAAAAGCCACCAGACGACAAGACCAAGGAGACCGCGGCTGCGCCAGGAACCATGCGACCCGGAGCATCCGATAAAAAACCTCAGTTGAAACCTCAGAAACCCTTCACACCTCCTGGAGGAATGCCAGGTCCGAACGGTATGAAAATGCCGCCCTTCATGGAAGGCATGCCTCCGCTTCCGTTCGCGCATCCCTTCAATTTCTGGGGTCCAGCGCCTTTCATGCCCTCACCCTTCATGGGGGGAGCTCCCAACGTCCCGGGAATGCTGCCAGAGCAGTATTTCGCCACTCAGAGGATGAGAGGACTACAGGAACAGCAGAGGAATGCGATAGTCCAGCAGCATCAACAGAGGGATCGAGATAGCAATACTGGATCAGCTGAACCAGGAACGTCCAACTCCCGAGGTTCGATCGTGAAATCTACAAGGGAGATGGCCGAGAGTCTCTACGATGGGACTGGGGCGAACGGTAGCTTCCTGGACAATCTGATCAGATCGAGTCTGGAGACAGGTATAACGAGGGACCAAAGGGCGATGGCCGAAGCTAGAAGTCAGCAGCAACAGCAACAAGCAGCTTCGCAGCATCATCCGGAGGCTCTGAGTAGCAAGGCGTTGATCGATCAGCTCTGCAGGAACTCTAGGCGAACGCCACTTCCAAGGATGACCCAGGACAGTAGCGAGGATGAGAGCTACAGAAGCTCGAGCGGCAGGTCGATACCGGAAAGACCTGAGAGAGTACCCACTGTCGACTTAAGTCCTTCGCCTTCCGAAAGGGGTCGAACCGATGATGGTAGCGATCGATTAACCTCGCCGCCTACGCCTCTACCAGTTTCCAGGGCAAGCAGCAGGGAGGAGGATCGTGACCCCAGGATTGATCGCAGCAGTAGGGAGCGTGAAGTCCTCAACGGGGGAAGCGAAGACCGGGAAAGAAAGACTCTGAATCTGCAGCAATCGCTGAATCACTACCCGGACTTACACAATCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAACAACAGCAGGAGTACGCGGCCGTAAGTGGGCTGGTGGTGCAACTGCAGAGGGGATACAACTCCGGTACCAGTAGGTCCGGTGATCAACCTCCCAACAACCAGCCACAAGAGCCACGCGGCTCAGCGGTGCTCATGGAAGACTCCGTAGAGCAGTAG
Protein Sequence
MGRRRWKQYQDTVYTGTRSESSTTTQQQQALHQRLYPTPPGCNPNAAALNQVAHLRPQVLPAQIKQELLIPKNLSNHHPTQEDQQDHLEQRHQEESNCAKVEVENSEVGIQDSRTETTTTTTVTTNNTNSTAVKRRNRGDDENRNEEEDEEDEAEKRLKPNEQNDRSTNYLNENERTSKEEDPTKPNDTEGTKERIEGVALERIQVTQGLLRVKKEEDLQEAPVPGSGLNSTSAATTNSLSATKEKEVIPENVFLGNRIASPPPEDWKPLDKCYFCLDGKLPHDDQAPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALGTYPTLLPQWCLPPREAPHVNVQAHQDNASGADQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGLDPKTIFNSCYRAKPRLTGPAGVGGVSVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTNTISHPHEFGVPAATITTTTSTTTTTATTTTTPNTTQNASAITPPSQVDEADEKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAAATPFKGLAESQDYRIPEVMRRLMSEDKRLSKDVNGDQSGNHQQQAQQQNNSQQQQRGPMTNDDFNPSIEEEGADSGQGRAILKIPSYKPANAPGSSKNGEPNSAAFAQGFAAGSGTVAGSPGLMERSSPAFSGTSSPTNSLVGKGVGVNFRDVIAKSISVKFQEGQSPGGMQGQGGLSQSPQSMMSESNPFKRGRYTPPQTTQQQQQKQQQSQSQDKQGKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKPPDDKTKETAAAPGTMRPGASDKKPQLKPQKPFTPPGGMPGPNGMKMPPFMEGMPPLPFAHPFNFWGPAPFMPSPFMGGAPNVPGMLPEQYFATQRMRGLQEQQRNAIVQQHQQRDRDSNTGSAEPGTSNSRGSIVKSTREMAESLYDGTGANGSFLDNLIRSSLETGITRDQRAMAEARSQQQQQQAASQHHPEALSSKALIDQLCRNSRRTPLPRMTQDSSEDESYRSSSGRSIPERPERVPTVDLSPSPSERGRTDDGSDRLTSPPTPLPVSRASSREEDRDPRIDRSSREREVLNGGSEDRERKTLNLQQSLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQQQQQEYAAVSGLVVQLQRGYNSGTSRSGDQPPNNQPQEPRGSAVLMEDSVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2