Sumb015163.1
Basic Information
- Insect
- Synergus umbraculus
- Gene Symbol
- dl
- Assembly
- GCA_900474325.1
- Location
- UCOK01010823.1:4803-9463[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-54 7.2e-51 173.0 0.4 1 169 15 184 15 184 0.99 2 2 0.54 2e+03 -0.9 0.3 102 132 473 503 441 512 0.59
Sequence Information
- Coding Sequence
- ATGTCTGCACATACAAATCGGCAGCCGCAAAGTTTACCCTACGTCGAGGTGATGGAACAGCCGGCCCAAAACTCGCATCGCTTTCGTTATCATTGCGAAAGTCGCACTGGTGGCTGCATTGTCGGCGTTGACAGTTGCCCCCAAAAAAAAACGTATCCATCAATCAAAGTGCACAATTATGAAGGTCCCGCTATGATTATTATATCTTGCGTGACAAATGAGGATAATCCAATGGTACATCCACACAGCATTGCAGCAAAAGCGTCCTGCAAAACAGGCATATGTACCCTGGAAGTAAAGCTTGATGGTAATGCAGTTTCCATCAGCAATCTCGGGATTAATTGCGTTAAAAAGAATCAAGTGATAGAGGTCTTGGAAATCAAGAAGGAAAACCAGATCGATCCCTTTAACAACGGGTTCGCACACATGAACAATCCAGACTCGATTGACCTCAATTCCGTGAAACTTGCTTTTCAAGTTTTCATCCCGGGCCATGACAAGAAGTACAGTGTGCCCCTCAATACTGTTGCAACCCTTCCCATCTATGACAAAAGAATGTTTCCAGAACTCACCCTTGTAGAAATGAGCCATGACAAGGCGCCGGTTTCTGGTGGTATGGAAATCATACTTCTCTGCGAAAAAGTCCCGAAGCAAGATATTCAAGTCAGGTTCTTTGAGATACGAAACGAAATGCTATACTGGGATGGTTACGGGAAATTTGCGGAAAAAGACGTGTACAAACATGTGGCCATTACCTTCAAAACGCCCCGATATCGCAACCAAAACATTTCCGAACCGGTGAATGTCTATGTGCAGCTGAGAAGAAAATCTGATGGTACCACGAGCAACAGTTTACCTTTTAAGATGATGCCACTCAACCCTAATCATATAAATTCACATAACATTAACAACATTGATAAGATTGAGTCGCTGAAgagaaaaagaatgaaatcCTGTGACtccaatttattaaaagagtTGAAGAAGCAGAACCAAAACACCGACTCGATGGAGCCGACTTTGAAAGTGCGCGCCGATTGTAATATTCCCTTTAATCAAAAGCAACATTCAAAAAGAGAGAACATCGTTTACCATGAACCTCGTATTTCGTCTTCTCAGTCCAACCCTCAGTCCAACCCTCAGCCTAAGCCTCAGCCTCATCAACATATTGAACATCCACTTCCTAATGTAACAATGAATTCTTATGCATATCGGGAGCCACGTTTTACTAATTATCGTCAGGAAGAATCAAAACAAGCCGAGAGAAAATCTTCCAATCATGAAACACAAATTGGAATTAATCTTGATGATGCATTTGACTTGGATGTCAACACCGATAATGTGAAATGCCAGGATTTGGCTTTGTTTGACAACATTGATacagatatttttgaaaatctctccGAGAATCTTTCCAAGGGACTTTCTATCTCGGACCAAATCGAGGAGACACAACAGATTAATCTTGAGCAGAATAAGGAAAATCAAGCTAgtcagcagcagcagcagcagcatgCAGTAAACTTTTTTCAGAACAATGAGAGAAACTTTAATGTTGATGATGGGTCCTACAATACCTTTCCGAAACAAACTTTTCGCTATAGTCTTCGTACACAGACGGACACTCAGTACTTTTAG
- Protein Sequence
- MSAHTNRQPQSLPYVEVMEQPAQNSHRFRYHCESRTGGCIVGVDSCPQKKTYPSIKVHNYEGPAMIIISCVTNEDNPMVHPHSIAAKASCKTGICTLEVKLDGNAVSISNLGINCVKKNQVIEVLEIKKENQIDPFNNGFAHMNNPDSIDLNSVKLAFQVFIPGHDKKYSVPLNTVATLPIYDKRMFPELTLVEMSHDKAPVSGGMEIILLCEKVPKQDIQVRFFEIRNEMLYWDGYGKFAEKDVYKHVAITFKTPRYRNQNISEPVNVYVQLRRKSDGTTSNSLPFKMMPLNPNHINSHNINNIDKIESLKRKRMKSCDSNLLKELKKQNQNTDSMEPTLKVRADCNIPFNQKQHSKRENIVYHEPRISSSQSNPQSNPQPKPQPHQHIEHPLPNVTMNSYAYREPRFTNYRQEESKQAERKSSNHETQIGINLDDAFDLDVNTDNVKCQDLALFDNIDTDIFENLSENLSKGLSISDQIEETQQINLEQNKENQASQQQQQQHAVNFFQNNERNFNVDDGSYNTFPKQTFRYSLRTQTDTQYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01391728;
- 90% Identity
- -
- 80% Identity
- -