Sumb026319.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus umbraculus
Gene Symbol
dl
Assembly
GCA_900474325.1
Location
UCOK01008824.1:2248-6424[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-57 6.7e-54 182.9 0.1 1 169 26 195 26 195 0.99
2 2 0.7 2.6e+03 -1.3 0.0 78 102 597 621 573 660 0.67

Sequence Information

Coding Sequence
ATGAGTCAAGGAACAAGTGCAAGTACATATGAATATCCACAATCTCAGATATTGATAACCAATAATTCTCCCTACGTCGAGTTAGTGGAACAACCCAGTGCACACTCGATTCGCTTTCGTTATGCGTCTGAAAAAAGATCAGCGGGGTGTATACTTGGTGTCAATAGTACTGTCGAACAAAAAACGTACCCATCAATTAGAGTGCATGGCTATCAAGGTGAGGCTGTTGTTGTGATATCATGTGTGACAATAGACGATCCTCCTAAGCCACATCCTCACAGCATCATAGGAAAAGATGCATGTGAAAATGGTATCTGCGTCATTAAAGTTAATCTTTGTGACGATATTATCTCCTTCAGCAATCTTGGGATTCagtgtgtaaaaaaaaaggatgtgAGAGAGGCTTTAAAGATCAGAAAGCAAGAAGGGGTCGACCCCTTTTCCACAGGTTACGATCATATGGACTTTCCGGATTTGATCGACCTGAATGCGATACGACTCTCTTTTCAAGTTATCATCAAGGGATCTGATATGAAATATACCGTGCCACTGAAGAGTGTAGCAACATGTCCTATCTACGACAAGAAGGCCGTTAAGAAACCTGTCATTGTTAAATTGAGCCAAAACAGTGCTCCAGTTTCTGGCGGAACTAAAATCATACTTCTCTGTGAAAAAGTCTGCAAGGACGATGTTCAGGTGAGGTTCTTTGAGATGCGAGACAACTGGCTCTTCTGGAATGCTTATGGAGAATTTAACCCATCTAACGTACACAAACAAGTAGCTATCTCCTTGATAACACCGAGGTATTGCAACCAGGATATTGTAGATCCAGTCACTGTTTATATTgagttaagaaaaaaaaggaatgatACCATGGTAATGGTAAGTAAGCCTATTCCCTTTCAGATGTTACCATTGGGTATGGATGATGAGGTttcattgaaaagaaaaaggatgaaattaaattacgaTCCTAAAACATATATAGCGCAAGAAATACAGACTCAGTCTAAGAAGCAAGGTAACATCTTGAATCAGGCTTTATTGATGAATTTTAGAGATGCTAAGCATCAACCGGGTCGCGAAATGCTCTTACCCTTTGAAGATAAAGAAAGACAACCCCCAATACCGAcagcaatttttcaagatcAGGCCTCAGCACTTCCGGTACCTCAGGTTACACAGCAAAGGattcattataatattcactttaatcaggaaaataattttgaaatagaagGTCCTTCTCACCCTCGCGGTGAAGTCCCAGCTCCAAATTTTAGGTCGCAACAACCTTTACTTCAAGCTCCAACAGAAAGGATGGATATTTCTTCCATTAGTCAACAGTATCATTTTAAAAGCGATGCTTGTTTACAGCCTGACTATGAGGCCCCAGTTCTTGAGTCCTATTCTTCACCTGCTCAGTTTCTTTGGCTTTCTCAACCTCAGTTTCAACCTCAATCTCAACCTCAACCACGTCGTTGCACTGAGCCCCCACCTCCTAATGTCACAATAAATTCTAATGTCTATCTGCAATCACCGTTTACTAACTATCGTCGGCCAGAACCAGAACCTACGCCGAAATATTCGTCCAATCAACAAGAAATGGTGATGGATCGATTGCATGATGATCACGTCGATGATCCATTCATGTTGCAAAATCTCCCGTGTGATATCGACCAGTTGAGTCAACAGGATCTACAACTGAATCTTCTTATAGGCACAACAGATTCAGATAATATTTCCGAAACTCTCTCCGAGAATCTTTCTAAGGGACTTTCGATTTCGGAGCCACTTGAGATTAATCTTGAGCCGCATAATGAAGTTCATGCGTGTCAACAGCAAGGTCAAGTACAGTTTacggaaaatattgaaaggaGGGATGCAAGTGCAAATGGGCTATCCTATAATCCCTTTGCGAGACACAGTTTTGACAATCACATGGATCAGATGCAGGCGGCAGTTCAGTACTGCTTTAATGACGGGAAGAGTTACGCTTTGGCTTAG
Protein Sequence
MSQGTSASTYEYPQSQILITNNSPYVELVEQPSAHSIRFRYASEKRSAGCILGVNSTVEQKTYPSIRVHGYQGEAVVVISCVTIDDPPKPHPHSIIGKDACENGICVIKVNLCDDIISFSNLGIQCVKKKDVREALKIRKQEGVDPFSTGYDHMDFPDLIDLNAIRLSFQVIIKGSDMKYTVPLKSVATCPIYDKKAVKKPVIVKLSQNSAPVSGGTKIILLCEKVCKDDVQVRFFEMRDNWLFWNAYGEFNPSNVHKQVAISLITPRYCNQDIVDPVTVYIELRKKRNDTMVMVSKPIPFQMLPLGMDDEVSLKRKRMKLNYDPKTYIAQEIQTQSKKQGNILNQALLMNFRDAKHQPGREMLLPFEDKERQPPIPTAIFQDQASALPVPQVTQQRIHYNIHFNQENNFEIEGPSHPRGEVPAPNFRSQQPLLQAPTERMDISSISQQYHFKSDACLQPDYEAPVLESYSSPAQFLWLSQPQFQPQSQPQPRRCTEPPPPNVTINSNVYLQSPFTNYRRPEPEPTPKYSSNQQEMVMDRLHDDHVDDPFMLQNLPCDIDQLSQQDLQLNLLIGTTDSDNISETLSENLSKGLSISEPLEINLEPHNEVHACQQQGQVQFTENIERRDASANGLSYNPFARHSFDNHMDQMQAAVQYCFNDGKSYALA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01391727;
90% Identity
iTF_01391727;
80% Identity
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