Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000002.1:1686512-1690280[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.6e-05 0.0035 18.5 0.7 1 23 148 170 148 170 0.95

2 15 0.0007 0.092 14.0 1.2 3 23 178 198 177 198 0.99

3 15 0.00062 0.082 14.2 0.1 1 23 321 343 321 343 0.98

4 15 0.0051 0.67 11.3 0.5 1 23 349 372 349 372 0.97

5 15 0.0001 0.014 16.6 3.3 1 23 400 422 400 422 0.97

6 15 1.8 2.4e+02 3.3 0.0 1 23 437 459 437 459 0.86

7 15 0.37 48 5.5 0.2 2 23 466 488 466 488 0.94

8 15 0.003 0.39 12.0 3.3 2 19 496 513 496 517 0.95

9 15 3.9e-05 0.0052 18.0 4.4 1 23 523 545 523 545 0.97

10 15 0.015 1.9 9.9 0.1 3 23 552 572 551 572 0.97

11 15 8.5e-06 0.0011 20.0 0.4 1 23 581 603 581 603 0.98

12 15 0.00036 0.048 14.9 0.3 1 23 609 631 609 631 0.98

13 15 0.001 0.14 13.5 0.3 3 23 639 659 637 660 0.95

14 15 0.0062 0.82 11.0 0.0 1 23 674 696 674 696 0.93

15 15 0.037 4.8 8.6 0.1 1 20 1084 1103 1084 1106 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.6e-05	0.0035	18.5	0.7	1	23	148	170	148	170	0.95
2	15	0.0007	0.092	14.0	1.2	3	23	178	198	177	198	0.99
3	15	0.00062	0.082	14.2	0.1	1	23	321	343	321	343	0.98
4	15	0.0051	0.67	11.3	0.5	1	23	349	372	349	372	0.97
5	15	0.0001	0.014	16.6	3.3	1	23	400	422	400	422	0.97
6	15	1.8	2.4e+02	3.3	0.0	1	23	437	459	437	459	0.86
7	15	0.37	48	5.5	0.2	2	23	466	488	466	488	0.94
8	15	0.003	0.39	12.0	3.3	2	19	496	513	496	517	0.95
9	15	3.9e-05	0.0052	18.0	4.4	1	23	523	545	523	545	0.97
10	15	0.015	1.9	9.9	0.1	3	23	552	572	551	572	0.97
11	15	8.5e-06	0.0011	20.0	0.4	1	23	581	603	581	603	0.98
12	15	0.00036	0.048	14.9	0.3	1	23	609	631	609	631	0.98
13	15	0.001	0.14	13.5	0.3	3	23	639	659	637	660	0.95
14	15	0.0062	0.82	11.0	0.0	1	23	674	696	674	696	0.93
15	15	0.037	4.8	8.6	0.1	1	20	1084	1103	1084	1106	0.93

Sequence Information

Coding Sequence: ATGGACGTTTCCGAGGAAATGACTCTGCATTGGGCAGAGGACGTCGGAAACGTTATTCACGAGGAAGTATGTGGCTTGGAGGAGGACATCGTCGCCCAGGAAGAGGAGGTGATCGGCGCTTGCGAAGAGGTCGTGGAGGAAACAGTCGAGGAAGAAATTCTCGAGCAGCCTCCGGAGCCAGATTCCGGAGATACCGAGATTCTCATGGTTCCTCAGTCAAGCGACATGGAGTCGATATACATAGTTCCTCAGGACCAAGGTCACGATTATTTCAACATACAAGTCACGGAAGAGGTCGTGGCTGACAATTGGGACAGATCTGGACCTGACGATGGGGTCGAGATTCCTGAGACAAAGGTCTCTCATGATAATTTGCTTGAGTATGATGACATGGAGATTCCCTTGCCGATCGATCAAGATTCCTACACAAACACACGACCCTATCCCTGCGACTTCTGCAGTCGCCGATTCAGGAAAAAAGCGAACCTGATGAACCACATGGTGGCTCATCAAACAGACAAACCCCATGGGTGCAATCTGTGTGGAGCACGTTACGCTAGAAAATGCGATCTCATGAATCACCAGAAGATTCACGCCTATGCACCTTCGCGTGACGGTCTGGAGGACGATTTAAACGACGAGGATCCTTTGATGCCGGAGGAGGAGGAAACCACGAAAGGCCGGCGGAAGAAGGTCCAATCGAGCGCTCCTAGAAGACGCAAGAACAACACTACAGCTTCTATAAAGCGGAATTACCAAGATGAATCCAAACTTGATGTTGGAAAGCTTGTTAGTAAATCTTACAACTACGTGGACGAGGATATGCGACTCCTGGAGGAGATGACGAGTCGCAGTTCGACTCGGGGAAATAATTTGGCCTCCAGCTCGCGATGGACTGAACAGATGGTCGTTAATGAAGGTCAGGCTACTCGCTGGCCTATCACAGACCCTACGAAGCCCTATGTTTGTCAGTTCTGCGGAGTTGGCTTTGCTAGAGAAAAAGCCTTGGCTTCTCATTCTCGCATTCATGGCGGTGACAGTCCGTTCGAGTGCACGTCTTGCGGAGAAATGTACTGGGACACGAATTCTCTCCGGGAACATATGAGATCCAAACATGGCGCGGCGGAGCCGATGGAGTCCGAAGTCGTGGTTACAACCACCGAAACCACTTACACGGGTGACGAGAGATTCGGGGAATTCTTTTGCGACACTTGTGGCACTGCTTTCCATCGGCTGGATCTTCTCAAGCGTCACCGAAAgaTGCACGTGAAGCAGGAGGTTGAAATGATAGAAGGATCGAGTCATCACCATGTTTGCAACGTTTGTGGAGAATGGTTTGAGGAAGCTTTGGCTCTTTTAGCTCATGCGGAACTGCACGCTAgATCACCTAGTCGTCGCTGTCTCTTGTGCGGCGAGGTTTGTCGTGACGACGCGGAAGTTGCGGAGCACGTGCGGCAAAACCACGCAGACGATGCGCCGCCAAACACCTGCAATCAGTGCGGAAAAACTTGCAAGGACAAACGCAGTTTGTTAAAACATTCTTGGGTTCACAACGTTGACAAGACATTCAGCTGCACTAAATGTGGCAAGCGGTTTCACAGTAAAGCGAGACTGCGCAGACACATGGTCTCGCATCGTAACAAGATGGTAGCATGTGATGAGTGTGGAGAGGAATTCCCAGACGGGAGAGCCCTCGTCAGTCATCGTCATTCGCATAATAAGGACCTGGGGGGTCGATCTTTCCCCTGCAGGGAGTGCGGGAAGACCTTTGGAAGCCGAAGCTCTCAACAGATACACATTCGCATTCACACTGGCGAGCGTCCTTACTCGTGTCGCTTTTGCTGGAAGGCTTTCGCCGATGGCGGAACTCTTCGGAAGCATGAGCGCATTCACACTGGCGAGAAACCCTACGGATGTACCATTTGTCCCCGTGCATTCAATCAAAGAGTCGTTTTACGAGAACACGTGAGAGCTCATCATTCCGGTCCAGACCCCAAGTGTCACGGAAGCATGACTCCTTATTTGTGTAAAGTTTGTGGCGAAGCATACGCCACTTCAGATGAAATTGTCGCCCACATAGTTCAGCACTGCGACGACAACACAGCCCAGCGAAGACAGCCTCAAACCGGGCCCCGGAAATACAAAAGGAGGCGTAAAATAAAGGCCCACGACTCGAGCATTCCCCCTCGAGTTTCTGAGAGTTACGAAATGATGGATGCCTCCGACTCTGACGACAACACGAAGCGAAAGCTTGGAAAGAAGTCGAAGACTCGCGTAGATGTTCAAGAAGGTTACCAGAATGTTCTCAAGAGTTTTGAGACCTCGCTTCAGAACATCAATCAAATCGTCAGCAATTCTAAAGTGAATCCTGCGAAGGCGAAACTCACCAAAAAGAAGATCAAGCGAGAGGAAAAGAAAGTGGAGCCACCAGTCGCGGCTCCTCTCGGCAGGTCGAAGATGATTCACACTCAGAAAACGAGAGTGCCTGTCGAGATTGGCAGCGAGGGAGTGAAAAAGGGTCAAAAGACCAAGACGATGATTACCAGGACTCCCAAAGTGATGACCAATGAACACAAACTAGGAATTTTCCCTGGAGGCGAGAGAAATCGACCGAGGACGAAGAACGTGAGTTATCACGTCGAGACCAAGAATCAAGTCACTCCAGCTACTTTTCCAAAGTCCAAGGAGAACGAGAAAGATCTCTCGGCTGATGATTCCCAAGAAATCGACAAGCAGACGGAGTCTGAAATAGAAACTTCAATTGAAGAAACATCTATATCGGGTATGGTGAACGTCAAGCTGGAGCCCGGCCTCCAAAGAAGCCAGAACCACGCGAACAATAACGGAAGTATCTCAGAGGATCAGAAAGCCACTCCAAAGAAAAAGACGCCTGCGAGGCGAGGAAGGAGACCCCGACAAGTGGTAATCAAGCAGGAACCTAGGGAGGAAGTTGTCGAGATCCCCAGTACGGATATTGAGGAAACCATTGAGACAGGACCTCTCACTGAACAGATCGTCGACGGAAATACGATGGAGGTTGCCTTCGAGGCTAATGTCGTTTCCACCGAAGAATCTATTCTCCCTGATCTTGAAAAGACCAATCACAATGAGACAGTGGGGAAGGAGAACGTCAAGGTCAATGTGAAGGTCGAGTCGACGCCACAGCGTGTTGTTTCCGCTCATAATCTAATCGCGCCTCTCGAAGAAACCACGGAAACTATTATTCCCGACGCTCTCGAGAGTCTTGAGCACACCTGCGAAATGTGTTCAGCGGTTTTCCCCAGTCATGCTGAGCTCCTTGTTCACGTCCCGATTCATATTTGA
Protein Sequence: MDVSEEMTLHWAEDVGNVIHEEVCGLEEDIVAQEEEVIGACEEVVEETVEEEILEQPPEPDSGDTEILMVPQSSDMESIYIVPQDQGHDYFNIQVTEEVVADNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDKPHGCNLCGARYARKCDLMNHQKIHAYAPSRDGLEDDLNDEDPLMPEEEETTKGRRKKVQSSAPRRRKNNTTASIKRNYQDESKLDVGKLVSKSYNYVDEDMRLLEEMTSRSSTRGNNLASSSRWTEQMVVNEGQATRWPITDPTKPYVCQFCGVGFAREKALASHSRIHGGDSPFECTSCGEMYWDTNSLREHMRSKHGAAEPMESEVVVTTTETTYTGDERFGEFFCDTCGTAFHRLDLLKRHRKMHVKQEVEMIEGSSHHHVCNVCGEWFEEALALLAHAELHARSPSRRCLLCGEVCRDDAEVAEHVRQNHADDAPPNTCNQCGKTCKDKRSLLKHSWVHNVDKTFSCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYSCRFCWKAFADGGTLRKHERIHTGEKPYGCTICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGEAYATSDEIVAHIVQHCDDNTAQRRQPQTGPRKYKRRRKIKAHDSSIPPRVSESYEMMDASDSDDNTKRKLGKKSKTRVDVQEGYQNVLKSFETSLQNINQIVSNSKVNPAKAKLTKKKIKREEKKVEPPVAAPLGRSKMIHTQKTRVPVEIGSEGVKKGQKTKTMITRTPKVMTNEHKLGIFPGGERNRPRTKNVSYHVETKNQVTPATFPKSKENEKDLSADDSQEIDKQTESEIETSIEETSISGMVNVKLEPGLQRSQNHANNNGSISEDQKATPKKKTPARRGRRPRQVVIKQEPREEVVEIPSTDIEETIETGPLTEQIVDGNTMEVAFEANVVSTEESILPDLEKTNHNETVGKENVKVNVKVESTPQRVVSAHNLIAPLEETTETIIPDALESLEHTCEMCSAVFPSHAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980368;
90% Identity: iTF_01392968;
80% Identity: -