Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000036.1:4304422-4307732[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.048 6.2 8.3 0.1 2 19 292 309 292 311 0.91

2 14 0.011 1.5 10.2 0.3 2 23 345 367 345 367 0.92

3 14 0.00013 0.017 16.3 1.0 1 23 373 395 373 395 0.98

4 14 4.8e-06 0.00063 20.8 2.6 1 23 401 423 401 423 0.96

5 14 0.0019 0.25 12.6 3.7 1 23 432 454 432 454 0.96

6 14 8.3e-05 0.011 16.9 1.0 1 23 460 482 460 482 0.97

7 14 1.3e-06 0.00017 22.6 0.8 1 23 487 509 487 509 0.98

8 14 0.0028 0.36 12.1 3.6 1 23 516 538 516 538 0.98

9 14 6.4e-06 0.00085 20.4 0.9 2 23 558 579 557 579 0.97

10 14 0.00035 0.046 15.0 0.7 2 23 587 609 586 609 0.95

11 14 0.0063 0.82 11.0 0.5 1 23 615 637 615 637 0.97

12 14 0.00055 0.072 14.4 4.9 1 23 643 665 643 665 0.99

13 14 1.1e-06 0.00015 22.8 2.5 1 23 671 693 671 693 0.97

14 14 2.5e-06 0.00033 21.7 1.3 1 23 699 721 699 721 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.048	6.2	8.3	0.1	2	19	292	309	292	311	0.91
2	14	0.011	1.5	10.2	0.3	2	23	345	367	345	367	0.92
3	14	0.00013	0.017	16.3	1.0	1	23	373	395	373	395	0.98
4	14	4.8e-06	0.00063	20.8	2.6	1	23	401	423	401	423	0.96
5	14	0.0019	0.25	12.6	3.7	1	23	432	454	432	454	0.96
6	14	8.3e-05	0.011	16.9	1.0	1	23	460	482	460	482	0.97
7	14	1.3e-06	0.00017	22.6	0.8	1	23	487	509	487	509	0.98
8	14	0.0028	0.36	12.1	3.6	1	23	516	538	516	538	0.98
9	14	6.4e-06	0.00085	20.4	0.9	2	23	558	579	557	579	0.97
10	14	0.00035	0.046	15.0	0.7	2	23	587	609	586	609	0.95
11	14	0.0063	0.82	11.0	0.5	1	23	615	637	615	637	0.97
12	14	0.00055	0.072	14.4	4.9	1	23	643	665	643	665	0.99
13	14	1.1e-06	0.00015	22.8	2.5	1	23	671	693	671	693	0.97
14	14	2.5e-06	0.00033	21.7	1.3	1	23	699	721	699	721	0.99

Sequence Information

Coding Sequence: ATGGAAACAGATCGTGAATCTGGTGGGTGTATTTATTCCTCAGAGAAAGATAATTCGTCAAATGAGCTTTTTATGCATTATACTAACCACAATGCAGATAAACACAATGAAGCAGCAAACTCTCAGCTCCTTTGTAACATGAGCGAACAACTCGAAAATTACGAGCAAATGACAAGATTTATTACTAATGCATGCCGCGTTTGCGGTGAAGAGATATCCGAAGGAATCGAGATATTCTCCAACAGGGGGAGTGAATTAAGACTGAAGGAGAGACTAGAACTGTTCTTTCCAATCCAACTGCAGCTCGaaacattttctcaaaaagtgtGCATGAACTGTTGTAATACACTGGAGAACACACACACGTTTGCTCTCAAGTGTTTGCAAACAGACATAAAGTTCAGGAGATATTTCAAGCCCGATAAAGAACCAGTACACGATAGAAGATTTACTAAATTGGGTTGCTCCATCGGACATAATATTCAAGAAGACTCTGATGCTGACAAAGTTTATCTGGGATACTTGATAAGTTTAgatcaaaatcaaataaatttagaattggATCAATCGGAAATTATGTCCCACCATTCGGAATTGAGTGACACTGCCTTGCAAAATCTAAAGTTTCCGGACGGTTCTGATAATGAGGTTCACCCAGGCTTGACTACTTTTTTCCAAGTCCTTCCTGAACCCGAAACGAGTGACAACATTTCCATTGAGTGTGAACGCGGCGGTTGCTTCAaaacacaagaaatttttgataatcATAAGACAATCTGTGTTGGAGGagaacttattttaaaagaatcttcCCGTTGCGAtattgaaaatgaagaaatgcaAGCGATCACAGATTTCCAACTCTCCATGAACACTTGCAACATTTGTAAACAAGTCTTCGACTCTAAAATGCTTCTAGATGAACATTCCATTCACTGCGAACCCTGCATTCTAAATGTGGGGGGTTCCGATGCGTTAGATTCGGCATTCAATGAAGTTGATGTCTTACTCAATTCGTCTGGAATGGACCGAACTTGTGGCTATTGTCAGATGTTATTCGTTACTCGAAAAGAGTTGCAAATTCATGTATCAGAAAATCATGCGGGTCAGAGTTTATTTAAGTGTCATTTTTGCGAGAAAGCCTATGAGAAATGGTCGAGTTTGGATATTCATGTGGCTACGCATCGATCGGATACACCATATCTTTGTGATCTATGTGGAAAGAGCTTCAAACACTCAAATAATTTGAGGGGGCACAAAAGGATTCATTTGGAGGATTCGAAGAAGAAAAGACATGTTTGTGATATTTGCGGAAGTGCTTTTAGGTCTAGGTTTCATCTGGGCGAACATATGCACCAGCACACTGGCAACAAGCCATATGCTTGTGATCAATGTGGAAAAGCTTtctttaagagaattcaattaAGGCAACATAAACTTTCTCATGGAGTTAACAAACACGAATGTCCAGTTTGTGGGGTGACATTTAATAGAAGGGGAAACATGAAAGCACATCTCAAAAGACACGAAAAAGGCGATGGACACTATACTTGTAGTatCTGCGAGCAACAGTGTAAGTCAATgagtgaattaaaattacaccGGAAGCAGCACACTGATTACGATATCATCGAAagtgtaaaaaagaaatcagGGGACAAAATTATCTGGTCATGTAAAATATGCTCTAAGGTATTCTCCAAACAAAATTTGCTTCGAAATCACGAACGCGTTCATTTCGTTGACAAGTGCAACATTGAATGCGACGAATGTGGGAAAAAATTATCTAGCAAAACCTCTCTGTCTTATCACAAGAAGTCGATTCACTCGAACGAAAGACCTCACGTGTGTCAATTTTGTGGAGAAGCTTTCATGTCCAAGGATGTGATGCTTACACATGAAAGGATTCACACCGGAGAACGTCCATATACTTGCAAAATTTGCAATATGCAATACAGatGTTCGAGCAATTTAAGTCAACATATGAAAACGCATTCAGGAATAAGGCCCCACGTTTGTAGCTTTTGCAACAAAAGCTTCACCAGAAAAAGTGCATTGACAATCCACGAAAGAATTCATACATGTACCAAACCATTCCGCTGCTCAGACTGCGATAGAACTTTCTCACTGAAAAACGACATGATAAAGCATATGGAAACACATCAAGCAAAGTCTATTCAAGAAAAGCAATGCGACGAAATTTTCACCCTTGCAAAAGACAATCTGGAAGAGCTTGTTGAACCCACACAAATCCAGCCCCAATCGTCCATTGTTCACAGCTACGTCATCGTTCCTCATCAGTTAGGTACTTACACTCTTAATATTAGCGGGAAAATGGCGGAAATCAATGAAGAGCCAAAAGATTTGTAG
Protein Sequence: METDRESGGCIYSSEKDNSSNELFMHYTNHNADKHNEAANSQLLCNMSEQLENYEQMTRFITNACRVCGEEISEGIEIFSNRGSELRLKERLELFFPIQLQLETFSQKVCMNCCNTLENTHTFALKCLQTDIKFRRYFKPDKEPVHDRRFTKLGCSIGHNIQEDSDADKVYLGYLISLDQNQINLELDQSEIMSHHSELSDTALQNLKFPDGSDNEVHPGLTTFFQVLPEPETSDNISIECERGGCFKTQEIFDNHKTICVGGELILKESSRCDIENEEMQAITDFQLSMNTCNICKQVFDSKMLLDEHSIHCEPCILNVGGSDALDSAFNEVDVLLNSSGMDRTCGYCQMLFVTRKELQIHVSENHAGQSLFKCHFCEKAYEKWSSLDIHVATHRSDTPYLCDLCGKSFKHSNNLRGHKRIHLEDSKKKRHVCDICGSAFRSRFHLGEHMHQHTGNKPYACDQCGKAFFKRIQLRQHKLSHGVNKHECPVCGVTFNRRGNMKAHLKRHEKGDGHYTCSICEQQCKSMSELKLHRKQHTDYDIIESVKKKSGDKIIWSCKICSKVFSKQNLLRNHERVHFVDKCNIECDECGKKLSSKTSLSYHKKSIHSNERPHVCQFCGEAFMSKDVMLTHERIHTGERPYTCKICNMQYRCSSNLSQHMKTHSGIRPHVCSFCNKSFTRKSALTIHERIHTCTKPFRCSDCDRTFSLKNDMIKHMETHQAKSIQEKQCDEIFTLAKDNLEELVEPTQIQPQSSIVHSYVIVPHQLGTYTLNISGKMAEINEEPKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392215;
90% Identity: iTF_01392974;
80% Identity: -