Smag012218.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus magnus
Gene Symbol
RAP1GAP
Assembly
GCA_032275165.1
Location
JAUESH010000039.1:17207725-17229894[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.033 13 6.8 0.0 7 43 1171 1211 1166 1224 0.84
2 2 6.2e-09 2.4e-06 28.5 0.0 50 108 1341 1399 1331 1401 0.91

Sequence Information

Coding Sequence
ATGTCGTTGCAGAGCCCGAGACTTCGACATTACAgaacCATGACAGCGATTTGTTTCGTCTGCAATTTACCAATCTTGAGTCATCAGGTGGGCCTGATATGGCAGGGCGGAAATGGATGGGACGATTTAGTTCGGGAGCAGGTCGAGGAATCGACACTGAAGCAACGTCTCGGAACTGGAAGACGTGATTCAGCAGCTCAGATTACCTCAATTTCACCTCCAAATGAAATCCAAGAGACATCACCGACAAATCAGCGTCGTAGACGTTCAAGCTTAGCACAATTGACTGATATTTTGCGAGAATGGGGCGGTGGAGGCACTTCAGGAAAAAGCggaaaagtaaataaacttTGTCGAAGAGAAACTCTAGCAGATATCGCAAAATCTCTACCTTGGTCGAGACAAACCACAACAGACGCTAGTCACCTTGCTAGTTtgagaaaaagaagagaaagcTCCGTGGATAGTGGAATTAAGAGTCAATATTCAACAAAGTCTCGACGTGATTCGACAATtagcgattttaaaaatgacatcGCTAAGCTTTGGAACAAAAAGGAGCAACAACAGACCCAACAAACACCTACTGTTATTTCACCTACTCCTAGAAGagGGTCTGGGGAATCGAAAAATTCTCGACGTGGTTCCGGTGAGAGTGCGAGATCGAGAAGGGATTCTATTGTTGGTGGTCAAACTCCAAGTCCTGGCGAAAGAAAACACAATTGTAGACATCATAGACGCAAGCAATCGCAACAATCTATCGACCTTGGTGTCACTCCTGCCAAATATTACAGAAATGATCAAAGGCCGAGCGCTTCCAGTACAGACAGCGCCGGAAGTTTCGCTGTCAGagATCATTTGGAAGCACAAAGGAGTTCTGATAAAAGTGAAAGGTCAAGTAGTTTGGAAGCGAAGACGACGTCGACAACTTTAACAGTTGAAACGAGGTCGGTAACAACCGAATGTAAAACCTTCAATTTGGAACCAAATATCAATCCACCGACAATCGTTATGTCTTCGGTGACGCCCCCAGCAGTTTCACCAGTTACCGGAAGCAGTCTTCCACTTCCTGGTACCTCCACTTCAGGAAATTCGAGTCCTGTTGGGTCTCCTAATGTTAGCACTACCCCTACACACCCTTTATTAACGACAAGGAGAGATTCAACGACTCAGtGCTACTATAAAACTAAAGAAGTTTCACCTAACAAATTATCGAGATTAACCAGACAATCTGCGGCAATAGATGAATCAATGCCTCCTAATGGGAGACGAGGTAGCCAGCCAACCTTGTCGCCAGATCCGGATGATGGAGGTAGAAAGGCACGAAGAGACTCTTTAAGTCCAGATTCAGCCTCTTATCCAAGACGTCGTGATTCGAAAAGTCATTTGAGTCCCGATAGAAATGCAGATAAGAGAGACATTAGTCCAATCAGACAGAGAAAAGCGCGACTCAGAAGACAATCAACCTCCATCGCCTGTCGAGTCCCAAGGTCACCAGACAGTTCATCATGCTCTTCCAGGGATCCCAGTCCATGTGCGAGAGCACCTGGCAGCATCCAACATGCACCTGTGATCAGAAGACAATCAACAaccgaagaaattttaatagccCGTGGCTTCAGGCGCCAAAGTACGACCGAAGAAATGATACGTTGTCGGAATTTTCGCAGACAGAGTTCGCAAAGTGACGACACGGTTCAAAGGTATCGAGGCAGGAGAGATAGCTCAGCTCAAATAACGGATGGGACTTTTGCAACTATGACAGTCGAGACTTCAAGCACTTTTTTTGACAGCAGTACACAGACTGaaccTTCCCCTTTGTATGACAACAACCACTATCACGAGGAGTGCCTAAGATGTAACAGCTGTGGCCTCAACCTCACGGGTCCCAATCAGAAACGCGCGCGAaggttcAAGAATCAAATTCTTTGTGACCTGCACTTTGCGGACGTTGCGCTGATGGAGTGCTCGGACTTCATGCAGCAATTGCGCAGCTTCAAGCCCCAAAGTTTAGGCTGCGCAGTTGCGAGAAGAAAATCTTCAACAACCCTCATCTTCCCCCTACCACCTCAAGCTTGTTCAGATGAATTCTGTCAGGAGTTTCCTCACAACCTAATCCCCACACCGGGATATTGGATTGAATGCTCAAGGCATCAAATTACATCGGACACAATCTGGGATGAGAGCGAAAGTGACCGTGATGTCACAGATCCAGAACAAGCTGAGGAGCAACAAGAACAATTTAAACAAAGACAGGACTTTTGTCTCTTCGAAGAAAATGAAATCGATACTGATGACGTTCCTAGGAAGAAAACCACCATTGAGGAGCAATGGGAGAAAAATCAAGGATTTGAGCTGACGTCGGTTGAACAAGAGACTTACGAAAAGTATTTCTATGGATCAGAacattggaattattttaCCAATGACGAAGATCTCGGTCCTGTCATTCTCAGCATCAAACAGGAAACTATTAATGGCAGGGATCAATTTCGAATTCTTGTCAGGGCCATTAGCTACACGGTGCATGGACTTATACCAGCCAGTTGCGTTTTTGCTGATAGATACAATCGAGAAGAGGTAGTTCGAAGTTTAGGAAAGGAGGTCAATATTAATCCCCCTCTGACTTTGGGACAACTGCCTGACACTCCTGAAGAGCTACTTAAACTTGACCAAGTTTTCATCAAATCTGAATTGAAAGTGGGTGTCATCTACGTTCAAGAAGATCAGTATAGTGAAGAAGAAATACTCGATAACAACGATAGTTCCcttttatttgaagaatttttacaaattctcgGTGATAAGGTCAGATTGAAAGGTTTTGATAAGTACAAAGGTGGCCTTGATACTGTCCACGATTTAACTGGACTTTATTCGGTTTACACTAATTGGAGAGGGATCGAGATCATGTTCCATGTGTCAACTTTACTGCCCTATGAAAAACATGATCCACAAAAGctTCAGAGAAAGAGGCATATCGGCAACGATATTGTGTGCGTCGTATTTTTGGAAGCCGACAATACCAGTTTTAGTCCAGCTTGTATAAAGTCACATTTTCTGCATACATTTATATTAGTTCGAGTGAGTCCAAGAATAAAGAGGAAAGTCACAAGATACGAGGTATCTGTAGTAACAAGGGATGAAGTTGGTGCTTACAAGCCTTATCTTTGGGAACAAAGCGTCTTCGAAAAAGGTCCCATGTTTCGAGAATGGATTCTTACGAAAATCGTTAATGGTGAAAGAGCAAGTTACTCTGCACCAAAATTCGCAAGGATGCAGGAAAGAACAAGAAGCCAAATGTTGGAGGACATAGTTGCCAATTTGGCAAACCATGCAGAAACAGGACAAATTCCAAAACCTTATAGACGGGGATCCTGGAGACCCATTGGTCACATGAGACCTTCTTCGCCTTTGTTGGACTCCGTTCGGGATCAATTTGAGGATTATGACCAACTAGcgaaagatttcacaagagtATTTTTGAATAACGCAGAAAATGTGACTCTTAATGCGAGTCTTTTCGATGTTTCATTTTTGGTACCTGGTCAGCAGAAGCAGAAAGTACGATTTATAGGAGTCAGAGCGATTTTAGGAGTCCGAAGCAGAGTCTTTCAAGAAATGTTGTATGGAATTCAAGCTGGTTTTGGAAGTCCTCAAGTTCCGGTCGCAGAATTATTAGCGAGACCGGCGCCAACTTTACTCAGTCCACAAAAGCCAAAGAGTTCGAATTTTCTTCAAGTACCGGACATGGAAAGCCCTAGGCCCAAAAGTGTACCATCTTCGCCTATGGTGAAAAGGGCCTTCTCTCGTCTGGGTACTATTACTGCGGGCTGGGGCAGAAGCATAAGAAAACATGGAAGTGGAAATACTTTGCAGAGCGACGACCGGAAACGGTGGTCCAGTTCACAAGACTGTAGCAATAAAGAATCTAAGGACAAAGACAAAGGAGGCAACTCTCTAGCAGTGCCAAGATTGAGTGTCTGTGCAGATGCTCAAAAAGTAGACAGAGCCAAATTGGCCCAAACcgagTTCGATATAATCGAATTTGATCCAGAAACCTTTAGAATTCTGTTGGACTACCTCCATACCGGATCTTGCCCTTTAACATGTAGCAATATTCCTGGCTTAATCTGTGCTGCTGAACATTATGATCTTCCAGAACTTCTACAGGCTTGTTTCCATCACGCTAAACAATttcttcgaattgaaattgtgTGTGTGATGCTATGTTCcttagaaaattattactgGCGATACACTTCTGCCTCGGAACTAGTGAACATGATTCTCGCCTTTGTTGAGACGAGGGCTTATCAACTTTTTCAGAGTCCAGACTTCTTGACATTAAGCGAGTCGATGGTTCAAATGATAATGTGCCGTGGACTTGAAGTGgttgagataaaaaaattcgaggcAATGCTCAGTTGGGCCAAACACAGGATCAAGACCAAATCATCAAAAATTGATGCTAAGATGGAATTCAAATGCATCATGGAGAGACTCAGCAGGGATCTCAAATTGTATAGAATAACACCTCAAGAACTTATCAGAATAGTTCTACCTTCAAAGGCCATCAagaatgaaagaattttagagaCACTGATGTTTCAAGCAAATTCAGGAATTTACAGAAACGTTGACCGTTATTTGGAGGCCTATCAAAACAGGATACAAAATCAAGAAAGCTTTGATTGCGGTTTATGA
Protein Sequence
MSLQSPRLRHYRTMTAICFVCNLPILSHQVGLIWQGGNGWDDLVREQVEESTLKQRLGTGRRDSAAQITSISPPNEIQETSPTNQRRRRSSLAQLTDILREWGGGGTSGKSGKVNKLCRRETLADIAKSLPWSRQTTTDASHLASLRKRRESSVDSGIKSQYSTKSRRDSTISDFKNDIAKLWNKKEQQQTQQTPTVISPTPRRGSGESKNSRRGSGESARSRRDSIVGGQTPSPGERKHNCRHHRRKQSQQSIDLGVTPAKYYRNDQRPSASSTDSAGSFAVRDHLEAQRSSDKSERSSSLEAKTTSTTLTVETRSVTTECKTFNLEPNINPPTIVMSSVTPPAVSPVTGSSLPLPGTSTSGNSSPVGSPNVSTTPTHPLLTTRRDSTTQCYYKTKEVSPNKLSRLTRQSAAIDESMPPNGRRGSQPTLSPDPDDGGRKARRDSLSPDSASYPRRRDSKSHLSPDRNADKRDISPIRQRKARLRRQSTSIACRVPRSPDSSSCSSRDPSPCARAPGSIQHAPVIRRQSTTEEILIARGFRRQSTTEEMIRCRNFRRQSSQSDDTVQRYRGRRDSSAQITDGTFATMTVETSSTFFDSSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRARRFKNQILCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEFCQEFPHNLIPTPGYWIECSRHQITSDTIWDESESDRDVTDPEQAEEQQEQFKQRQDFCLFEENEIDTDDVPRKKTTIEEQWEKNQGFELTSVEQETYEKYFYGSEHWNYFTNDEDLGPVILSIKQETINGRDQFRILVRAISYTVHGLIPASCVFADRYNREEVVRSLGKEVNINPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIYVQEDQYSEEEILDNNDSSLLFEEFLQILGDKVRLKGFDKYKGGLDTVHDLTGLYSVYTNWRGIEIMFHVSTLLPYEKHDPQKLQRKRHIGNDIVCVVFLEADNTSFSPACIKSHFLHTFILVRVSPRIKRKVTRYEVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWILTKIVNGERASYSAPKFARMQERTRSQMLEDIVANLANHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLAKDFTRVFLNNAENVTLNASLFDVSFLVPGQQKQKVRFIGVRAILGVRSRVFQEMLYGIQAGFGSPQVPVAELLARPAPTLLSPQKPKSSNFLQVPDMESPRPKSVPSSPMVKRAFSRLGTITAGWGRSIRKHGSGNTLQSDDRKRWSSSQDCSNKESKDKDKGGNSLAVPRLSVCADAQKVDRAKLAQTEFDIIEFDPETFRILLDYLHTGSCPLTCSNIPGLICAAEHYDLPELLQACFHHAKQFLRIEIVCVMLCSLENYYWRYTSASELVNMILAFVETRAYQLFQSPDFLTLSESMVQMIMCRGLEVVEIKKFEAMLSWAKHRIKTKSSKIDAKMEFKCIMERLSRDLKLYRITPQELIRIVLPSKAIKNERILETLMFQANSGIYRNVDRYLEAYQNRIQNQESFDCGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01392932; iTF_01394510; iTF_01389615; iTF_01392176; iTF_01390485; iTF_01391352; iTF_00460959; iTF_00714562; iTF_00713083; iTF_00769819; iTF_01538114; iTF_00878275; iTF_01364803; iTF_00398242; iTF_00059594; iTF_00905556; iTF_00397467; iTF_00721406; iTF_00265156; iTF_01271364; iTF_01269196; iTF_01267705; iTF_01268416; iTF_01048356; iTF_01049077; iTF_01509029; iTF_00265891; iTF_00263664; iTF_00266618; iTF_01207524; iTF_00629253; iTF_01306661; iTF_00798727; iTF_00829672; iTF_00828936; iTF_01057046; iTF_01057803; iTF_01056212; iTF_01129497; iTF_01110343; iTF_01112840; iTF_01113615; iTF_00693185; iTF_00938165; iTF_00452067; iTF_01111997; iTF_00351306; iTF_01077610; iTF_01380106; iTF_01454314; iTF_00898919; iTF_01099367; iTF_00773947; iTF_00132747; iTF_00132113; iTF_00131446; iTF_00326540; iTF_00734887; iTF_00080494; iTF_00016813; iTF_01476390; iTF_00016173; iTF_00182099; iTF_01477049; iTF_01261949; iTF_00385697; iTF_00883202; iTF_01477762; iTF_01520418; iTF_00417734; iTF_00047401; iTF_01355561; iTF_01015983; iTF_00625621; iTF_00879893; iTF_00046393; iTF_00881436; iTF_01270653; iTF_01523517; iTF_00181438; iTF_00129887; iTF_00126873; iTF_01037229; iTF_01035625; iTF_01487210; iTF_00756808; iTF_01036424; iTF_00144015; iTF_00286607; iTF_01228493; iTF_00142574; iTF_00141944; iTF_01068419; iTF_00222020; iTF_00224002; iTF_00224674; iTF_00232099; iTF_00221382; iTF_00230150; iTF_00233351; iTF_00214504; iTF_00232716; iTF_00230800; iTF_00222646; iTF_00226718; iTF_00761094; iTF_00982408; iTF_01123178; iTF_01122574; iTF_01066384; iTF_01069793; iTF_00964599; iTF_01067735; iTF_00873912; iTF_01070488; iTF_00684282; iTF_00303230; iTF_00064627; iTF_00687348; iTF_01421684; iTF_01273237; iTF_01273938; iTF_00159254; iTF_00060489; iTF_01200347; iTF_00175875; iTF_01411683; iTF_01474084; iTF_00252966; iTF_00292391; iTF_00291688; iTF_00298472; iTF_00294636; iTF_00296172; iTF_00297709; iTF_00295407; iTF_01473327; iTF_00293874; iTF_00254484; iTF_00296948; iTF_01475605; iTF_01130967; iTF_01395257; iTF_00252218; iTF_00255229; iTF_01474846; iTF_00253727; iTF_00175207; iTF_00174459; iTF_01413513; iTF_00718762; iTF_00719583; iTF_01412490; iTF_00939758; iTF_01303600; iTF_00293108; iTF_00938900; iTF_01414363; iTF_00841239; iTF_00438904; iTF_00438235; iTF_01087352; iTF_00452699; iTF_01484860; iTF_00730205; iTF_00730909; iTF_01198813; iTF_00770511; iTF_01199547; iTF_00200959;
90% Identity
iTF_01392932;
80% Identity
-