Slae003004.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus laeviventris
Gene Symbol
ZFX
Assembly
GCA_032275145.1
Location
JAUESI010000003.1:14821982-14829215[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.73 99 4.4 0.1 3 23 12 32 11 32 0.96
2 15 7 9.5e+02 1.3 2.7 1 23 857 880 857 880 0.81
3 15 1.1e-05 0.0015 19.5 0.5 3 23 962 983 960 983 0.96
4 15 0.0048 0.66 11.3 0.1 2 23 996 1017 996 1017 0.98
5 15 9.9e-05 0.013 16.6 1.9 2 23 1020 1041 1019 1041 0.96
6 15 0.014 1.9 9.9 0.3 1 23 1047 1069 1047 1069 0.95
7 15 2.3e-05 0.0032 18.6 4.5 2 23 1076 1097 1075 1098 0.95
8 15 0.1 14 7.1 3.7 5 23 1111 1129 1110 1129 0.97
9 15 2.7e-05 0.0036 18.4 2.5 2 23 1135 1157 1134 1157 0.96
10 15 0.0096 1.3 10.3 0.3 2 23 1173 1193 1172 1193 0.97
11 15 6.4e-05 0.0086 17.2 0.7 1 20 1199 1218 1199 1221 0.92
12 15 7.9e-05 0.011 16.9 2.7 1 23 1229 1251 1229 1251 0.99
13 15 0.0022 0.3 12.3 3.2 1 23 1257 1279 1257 1279 0.97
14 15 1.1e-05 0.0014 19.6 4.8 1 23 1285 1307 1285 1307 0.99
15 15 0.0073 1 10.7 6.6 1 23 1313 1335 1313 1336 0.96

Sequence Information

Coding Sequence
ATGGATTACGGAAGTAGTGTTGGGGCTGTTGCTTGCCCAGTTTGTACTCTTTTTCTACGTGAAGGAATCAGTTTACAAAAACACTTGGATACTCACCCTAAAGAGCAGGTGATTGAAGCTCTTATCAAAGCTAGTGCTTCAGCCTTAAATCAGCTACAGGATTCGCCACATCAATCACCATCATCACCTCCAAATCAAATTGCCACTCAGCCTCAGGCGCAAGTGAATTCAGCTTCTCATGTTTCCTCACAATCTCCATATCCTGTGGCGCCAGTTTTCGAGTGTCCGTCAACCTTAAATGCCGTACTCTCCCCGCCACAGTATGCCTCATTTAGTTATCAACAATTTATCAATAATGGAACTGTAATGATTCCTGCGGTGATGGCACCGCAGAACAATCCTATGATGCAAATGCTTTATTCTCCGTATGGCATGTATCATCAACAACCAGTTCCTACAGTTCAAATGATATCACCCGTAACTCCAACCGCTTCTACTGCAACAGTGAACACAACAAACACTGCTAGTAGATTCAAACCTACAAATATATTGTCAATCAATGATTCCCTTATAAAAACGAGTCCATCTGAAAAGTATACTTGCCCTGAAACTAGACCTTTGTTACCTGAAGTTATACAAGAAGATGAAACACAGATATTGCTTCCTGAGACATCTTCTCGTTCAACTACATCTAAGGAACGATCAAGTCGATGTGATCGGACCATGGATAGTCAATCGGACGTTGAATGCCGAGAACAAATACAAGTTTCCAATGAGGAAGAAAGAAATGACGCATCATCTACAGATCAACGAAATTATCAGGATATCGTATCTCATGAAGTAGTAAATGATCAAAGGGAGAGAATTCAGTTGAGTATCGACAGCAAAGAAACTTCGACACGTGAAGCAGTAATTGCAGAAAAATTCCCTAGTGTATCTAAGTTATCTAAAAGCTGCGACAGTGTCCTTGATGAAGATTCTTTAGATAAAATGGAAGAAGTAGAAAAGGAGGAAGATCAATTAGAAGATGACAAGTCTAATTCTGATGAACAAGATGACTGGAAAAAGTGTTTCCGTTCGCGAGTCTCAACAGCCAGTGAAAGTGATCTAAATGAGAATCAACCAGAAGTGGAACAACTGGAGCATCTTTTAATAACTATTATAGGGTCAGAATATGATGGTGTCAGTGTAGCACAATCCAAAAATTGTCATACTATACGAAAAGCCATCAAGTCAAGGGAAGTAACACAGACAAGTGGAAGCCAAAGTGATAATGATTGTTCGCCAACCAACTCCGactttaataaatctttttcaatggGTAGtgataatttaacaaataacTTGGATCGTAATCAAACTTATCACTGTAAAAATAGTGTGTCCGCACCTACGTCtcctattttctttaaaaaacctCATAAATCTCATTCACGTTTGTCACTAAGATCTGACTTTGGATCCAGTGAAAATGTTTCTATGTATCCAATTGGTTTCGAGGCAGCAGTTTTGCATAATTacgcatttttaaaaaatgagaatgatAGCGATGATGCTGAAATAGAGCAAATATCTTCTAAGGCCTTCGTAAAGGAATATCATGAGGTTGAGGAGGAACGTGCTATGTCACAAACGCCTTTTTCCGACACTAGCAGTAATTCTGTTATACGAGTACGCCGCAATATTCTTAGTAAATCTGGTTCACCACTACCTAATCATCTACTTCATGATATTGACATGAATGATATCATTTGTAATAAAGAAGGTTATGATCAGAGCGATTCATCAACAGAGCAAAATCTTATCAGCTCAGAGTTACCAGAGGCGAAAGAAAACTCTATTGAACACACAGATTTATCCCGAAACCCTCTTGAACGATTAAAGGTCAAATGTGAAGAGCGAAGTTGTGCGAACACAACGAGCAATTTAATTCTTGATTCTCATAAACGGCAGGAGTTTGCCATGTCAGAGGATGTTTCACTTGCAACAAACACTACATCTAGAAATGAACCTTCGAAATTATCAGAGTCAACTGAACCAACAACAAGTACGAATTCCAGGAATCGCGACGACAACAAGATCATCTTTCAAAAACCAGCTACGGAAGTTTTCCATATAAACGAAGATGCACATAGTGGCCCTATGAATGTTTTCGAATTTGATGGTTTACAAATATTGGTACCCAGTACTTTCATAAGTGAGTCTTCAGAAAAAGCAATTAGCGGGACGAGTCAACAATCTTTATCTAGTAGTGAAGGCGGAACCGGTCCCGATGAAGAGATAAAAAGTATCAATATGCGAGCAGATGAAAGTATGCCACCTAGAGGTGAATTATCAGAGCAAGAAAGCAACGAATGTACAGATCAATCTACATGGCAGaTTTACATTGGACAAGAAACATCACGTATGTCCACATCTTATGATCTTATGGCTCGCGAAACTTGGGATGAATCTGAAGGTTCGGATAATGAGATAGGAGGATCTCTTTTGGATAGCCGATCCTTAGCGACACATTTTACATCTAGTCTGTTTTTAGATCGTGATAGAAAAACGCCGACGCGGCGAATTTTCAAATGCTCATTCTGTACTGAAGTTTTTGAATGTCCCAAGGAACGTAGAGTTCATAGCACAACTGTTCACAAAGACGCTGGTCCTAGTAATAGTAGAGATCCTACTGAACAGACTGAAACGAAAGATATTAAGTTATTGGATGGACGTATGAACATGTTCGAAGACATTTTCGTAGCAGGATTACATGTTCCACAAACATATCATCAACCACTGTTACATCAGCTTCAACCACCTCAACAATTAGATGTaggaaaatctgaaaatgataaaaagattgaaaatttaagaattcccACCTCAATGgacattatttgcaatatttgtaATCTGAGTTTTACTAGTGAGAAATCGTTACAAATTCATCAGAGAAGAATGCATATTAAAGAATCCGTAAAGCGCGTTAGGGAAAATGCTAAGTGCCAGATTTGTAATCAAGAATTTCCTTCggttattttgtttaatgcacatttaaaaatacatccTCTAGAATGCGGTCAgtgtggaaaatatttctataggaaacaaaatttcaaattacacgTGAAGCGTCACCTTGGAATAAAACCCTTTCCTTGTTCAGTATGCGACAAGGCTTTTCTTACGAAGCAAAAGCTAGATGAACACACCAATGGACATACAGGAAATGCTCCCGTCAAATGCAACTTGTGTAATGAAACTTTTCGAAGATACTCGAATTTAACTCAACATAAGAACAGACATCATTTGCACGTGAAGAAAAAGTTGAAGGACTACATATGTCACTGTGGCGAAGTATTTCATACAAAGAAGAAACTCGCTTGGCATAAAGAGACACACGATGAGAAACCAAAGTCGTGTACGTATTGTAATGAAAGGTTCATTCACATGGCTAGCCTAACTCGTCACATGCGACGTGCTCACAATCGAAGATTCGTTCCTGATGCTCAAAGGGAAAGTGAAAATGTAGAATGTCCGATATGTAAATGCATTTACTTACGGTCTTCTTTAGCTGTACATATGAGAGTGCATAATGGCGAACGGCCATACGAGTGTCAAGTTTGCTCTAAAGCTTTTAGTACGAAATGGAATTTGCAATTGCACAAATGGACGCATGCAGCGAGAAGTACTAAGCCATTTAAATGTAATCAATGCAGTGCTGCCTTTTATCGACATAGTGACTATACGGCGCACATGAATTCTCACAGAAATGTACGGCCTTACACGTGCAATTATTGTGGAGCTCAGTTTATACGTAAATATAATTGTCTCAGGCATGTCAAGGAACATGAAGAGAATAAATCTTATACATGTGATACATGTAACAAAACTTTTCATAGATCGTATTACCTCAAAGAACATTTGCGTGTTCACTCGGGCGCAAAACCATATTCGTGTCATATTTGTGGTAAATTGAGTAGTACTAAATCCAATCACAATAAACATGTGAGAATTCATCACGCACGAGAACCTGTAAATACCGAAAATTAA
Protein Sequence
MDYGSSVGAVACPVCTLFLREGISLQKHLDTHPKEQVIEALIKASASALNQLQDSPHQSPSSPPNQIATQPQAQVNSASHVSSQSPYPVAPVFECPSTLNAVLSPPQYASFSYQQFINNGTVMIPAVMAPQNNPMMQMLYSPYGMYHQQPVPTVQMISPVTPTASTATVNTTNTASRFKPTNILSINDSLIKTSPSEKYTCPETRPLLPEVIQEDETQILLPETSSRSTTSKERSSRCDRTMDSQSDVECREQIQVSNEEERNDASSTDQRNYQDIVSHEVVNDQRERIQLSIDSKETSTREAVIAEKFPSVSKLSKSCDSVLDEDSLDKMEEVEKEEDQLEDDKSNSDEQDDWKKCFRSRVSTASESDLNENQPEVEQLEHLLITIIGSEYDGVSVAQSKNCHTIRKAIKSREVTQTSGSQSDNDCSPTNSDFNKSFSMGSDNLTNNLDRNQTYHCKNSVSAPTSPIFFKKPHKSHSRLSLRSDFGSSENVSMYPIGFEAAVLHNYAFLKNENDSDDAEIEQISSKAFVKEYHEVEEERAMSQTPFSDTSSNSVIRVRRNILSKSGSPLPNHLLHDIDMNDIICNKEGYDQSDSSTEQNLISSELPEAKENSIEHTDLSRNPLERLKVKCEERSCANTTSNLILDSHKRQEFAMSEDVSLATNTTSRNEPSKLSESTEPTTSTNSRNRDDNKIIFQKPATEVFHINEDAHSGPMNVFEFDGLQILVPSTFISESSEKAISGTSQQSLSSSEGGTGPDEEIKSINMRADESMPPRGELSEQESNECTDQSTWQIYIGQETSRMSTSYDLMARETWDESEGSDNEIGGSLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSFCTEVFECPKERRVHSTTVHKDAGPSNSRDPTEQTETKDIKLLDGRMNMFEDIFVAGLHVPQTYHQPLLHQLQPPQQLDVGKSENDKKIENLRIPTSMDIICNICNLSFTSEKSLQIHQRRMHIKESVKRVRENAKCQICNQEFPSVILFNAHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCSVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKSCTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDTCNKTFHRSYYLKEHLRVHSGAKPYSCHICGKLSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01393776;
90% Identity
-
80% Identity
-