Slae013193.1
Basic Information
- Insect
- Synergus laeviventris
- Gene Symbol
- KLHL3
- Assembly
- GCA_032275145.1
- Location
- JAUESI010000034.1:2230327-2232626[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 9.4e-07 0.0019 18.6 0.0 2 38 192 228 191 234 0.86 2 5 4.8e-12 9.7e-09 35.5 0.0 2 38 242 277 241 283 0.87 3 5 0.0053 11 6.6 0.0 7 34 299 325 295 331 0.83 4 5 2.3 4.6e+03 -1.9 0.1 31 45 339 354 339 354 0.87 5 5 3.8e-12 7.7e-09 35.9 0.0 5 42 357 394 356 397 0.93
Sequence Information
- Coding Sequence
- ATGTCCGAGGTCGGCGTCGACGAAAGCTTTtcattcaaatggtgcgattATCAGAATCATTTATCTGGAGTTGTTCGCCAGCTCCTCGACGAGAATTGCATGGTGGATGTTACATTGTCTGCAGAGGGCGAACGCATTGAAGCTCATCGTATTGTTCTATGCGCTTGCAgtactttattcaaagaacttTTAAGTGATGTGACTGTAGACCATccaacaataattttaagcggTATATCATCTGAAGATCTCAGGGCAATTGTGGAATTTACATATCAAGGAGAGGCTCATATTcctgaagaaaatattagCACTCTTTTGGAAGCAGCacgtttcttaaaaataactggTTTGATGgagTATGATGTGAACGAATCAAATATAAAGACAAAAGACGTAAATGAAGATAATGACGAATCCTCAccagaatttaatgaaatggaAGAAGAAGTTTTGGATGTTTTGGAACAATCTTATGATGACACGAACGAACAATCGGAACACAATGTAACAGATGAAAGTTCTGGAGGCAAAAAAAGAAAGCGGCGTTTTTCTACGAAAAGAGAATATAGCGAAGAAATGTTAGCCTCCGCTATTAATAATTTACGTGAGGGACAGACTTTAATCGAAgctgcaacaaaaaataatattcctcgTTCAACTTTGTATATGCGGGCTAAAGCATTaggaattcaattaaatgcttCCAGGAACGAATATCCTCCCGAGTGCATGAGGGCAGCTATAAATTCTGTTATTGGAGGATCGAGTTTGCAACAAGCATCAGAATTGTTTGGTATTCCAAAAACTGTACTCTGGCGACGAATGCAAAAAGAAGGCTACCAGATATTTCGTTCCGAAATGAAGAGAAGTTATGGCTCGGATAAAAGAGAGGCTGCTGTGAAAGCTTTGCAACGTGGAGAAAATCTCACGAAAGTTGCACTCGAATATCAAATTCCAAAGACGACCCTTTTTAGAGACAAGGCTCGTCTAGTCGACGAAGGAAAATTACCCTCTTCTTTCTGGAAGAAGAGGAAAACCGAAAACGAATCGATTAAGAGACTCCTATTGGATGAAGCCGTGGCTGCCTgcaaaagtggaaaaatgtcGCAAGCTGCTGCTTCCGTATTTTATCGTATTCCAAAAACTACGATATGGAGGCATTTGCAAgataatacaaaaatgaaaaagaaaacaaagtcTAATGATCCTGTTTCGAATGTGGAAAGTAAAGACGAACCGGATACCGAATATACATATTGCGAGgtTGCTTCCGAAATCCCGGTCACATATACAATAGATGATAATGGCATTTCCGGAGAGCAAGTTATAGTTTTTACGCCTGAAGAGGTTGAAGAATTGAATTTGGATGGCCGTACACAAATCATCATCAGTTCGgatTCAAACCAGGAATTCGTTTCGAGCCCTACAAATGTCGAAGATGATTCTAATTACAGTTCGAACAAAAGTTAA
- Protein Sequence
- MSEVGVDESFSFKWCDYQNHLSGVVRQLLDENCMVDVTLSAEGERIEAHRIVLCACSTLFKELLSDVTVDHPTIILSGISSEDLRAIVEFTYQGEAHIPEENISTLLEAARFLKITGLMEYDVNESNIKTKDVNEDNDESSPEFNEMEEEVLDVLEQSYDDTNEQSEHNVTDESSGGKKRKRRFSTKREYSEEMLASAINNLREGQTLIEAATKNNIPRSTLYMRAKALGIQLNASRNEYPPECMRAAINSVIGGSSLQQASELFGIPKTVLWRRMQKEGYQIFRSEMKRSYGSDKREAAVKALQRGENLTKVALEYQIPKTTLFRDKARLVDEGKLPSSFWKKRKTENESIKRLLLDEAVAACKSGKMSQAAASVFYRIPKTTIWRHLQDNTKMKKKTKSNDPVSNVESKDEPDTEYTYCEVASEIPVTYTIDDNGISGEQVIVFTPEEVEELNLDGRTQIIISSDSNQEFVSSPTNVEDDSNYSSNKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01392906;
- 90% Identity
- iTF_01391875;
- 80% Identity
- iTF_01392906;