Basic Information

Insect: Synergus japonicus
Gene Symbol: ZFX
Assembly: GCA_900474275.1
Location: UCOH01007679.1:9726-12620[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 3e+02 2.6 2.7 1 23 113 136 113 136 0.81

2 14 2.5e-06 0.00026 21.7 0.6 3 23 218 239 216 239 0.96

3 14 0.002 0.21 12.5 0.1 2 23 252 273 252 273 0.98

4 14 4.2e-05 0.0043 17.8 1.9 2 23 276 297 275 297 0.96

5 14 0.0058 0.59 11.1 0.3 1 23 303 325 303 325 0.95

6 14 9.8e-06 0.001 19.8 4.5 2 23 332 353 331 354 0.95

7 14 0.044 4.5 8.3 3.7 5 23 367 385 366 385 0.97

8 14 8.9e-06 0.00091 20.0 1.5 3 23 392 413 391 413 0.97

9 14 0.0041 0.42 11.6 0.3 2 23 429 449 428 449 0.97

10 14 2.7e-05 0.0028 18.4 0.7 1 20 455 474 455 477 0.92

11 14 3.3e-05 0.0034 18.2 2.7 1 23 485 507 485 507 0.99

12 14 0.00093 0.096 13.6 3.2 1 23 513 535 513 535 0.97

13 14 4.4e-06 0.00046 20.9 4.8 1 23 541 563 541 563 0.99

14 14 0.0031 0.32 12.0 6.6 1 23 569 591 569 592 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	3e+02	2.6	2.7	1	23	113	136	113	136	0.81
2	14	2.5e-06	0.00026	21.7	0.6	3	23	218	239	216	239	0.96
3	14	0.002	0.21	12.5	0.1	2	23	252	273	252	273	0.98
4	14	4.2e-05	0.0043	17.8	1.9	2	23	276	297	275	297	0.96
5	14	0.0058	0.59	11.1	0.3	1	23	303	325	303	325	0.95
6	14	9.8e-06	0.001	19.8	4.5	2	23	332	353	331	354	0.95
7	14	0.044	4.5	8.3	3.7	5	23	367	385	366	385	0.97
8	14	8.9e-06	0.00091	20.0	1.5	3	23	392	413	391	413	0.97
9	14	0.0041	0.42	11.6	0.3	2	23	429	449	428	449	0.97
10	14	2.7e-05	0.0028	18.4	0.7	1	20	455	474	455	477	0.92
11	14	3.3e-05	0.0034	18.2	2.7	1	23	485	507	485	507	0.99
12	14	0.00093	0.096	13.6	3.2	1	23	513	535	513	535	0.97
13	14	4.4e-06	0.00046	20.9	4.8	1	23	541	563	541	563	0.99
14	14	0.0031	0.32	12.0	6.6	1	23	569	591	569	592	0.96

Sequence Information

Coding Sequence: ATGGTCGGGCCAACCAGGGTAATGATAACGCAAGACATCTCTATTTTTTACGTTGGGCCAACAATAGTTTTCATGGTAGAGCTAACTGCGGAATACAAGGTTGACATACCATTGGTTTTCAAAGTTGGCTCAACATTGAGAAGAAGCaTTTACATTGGTCAAGAAACATCACGTATGTCCACATCATATGATCTTATGGCTCGCGAAACTTGGGATGAATCCGAAGGTTCAGATAATGAGATAGGAGGATCTCTTTTGGATAGCCGATCTTTAGCGACACATTTTACATCTAGTCTGTTTTTAGACCGTGATAGAAAAACACCGACTCGGCGAATTTTCAAATGCTCATTCTGTACTGAAGTTTTTGAATGTCCCAAGGAACGCAGAGTTCATAGTACAACTGTTCACAAAGATGCTGGTCCTAGCAATAGTAGAGATCCTACTCAACAGACTGAAatgaaagatattaaattattggatGGACGTATGAACATGTTTGAAGACATTTTCGTGTCAGGACTGCATGTTCAACAAACATATCACCAACCACTGTTACATCAGCTTCAACCACCTCAACAATTAGATGTAGGAAAATCTGCGAATGATAAAAAGGTTGATAATTTAAGAATTCCCACCTCAATGGAcattatttgcaatatttgtAATCAAAGTTTTACTAGTGAGAAGTCGTTACAAATTCATCAGAGAAGAATGCATATTAAAGAATCTGTAAAGCGCGTTAGAGAAAATGCCAAGTGTCAGATTTGTAATCAGGAATTTCCTTCGGTTATTTTGTTTAATgcacatttaaaaatacatcCTCTAGAATGCGGTCAGTGTggtaaatatttctataggaaacaaaatttcaaattacacgTGAAGCGACATCTTGGAATAAAACCCTTTCCATGTTCAGTATGCGACAAAGCTTTTCTTACTAAGCAAAAGCTTGATGAACACACCAATGGACACACTGGCAATGCTCCCGTCAAATGCAATTTATGTAATGAAACTTTTCGTAGATACTCGAATTTAACTCAACATAAGAATAGACATCATTTGCAcgtgaaaaaaaagttgaaggaTTACATATGTCACTGTGGCGAAGTATTTCATACAAAGAAGAAACTCGCGTGGCATAAAGAGACGCATGATGAAAAACCAAAAGCTTGTACATATTGTAACGAAAGGTTTATTCACATGGCTAGCCTAACTCGTCACATGCGACGTGCTCACAATCGAAGATTCGTTCCTGACGCTCAAAGGGAAAGTGAAAATGTAGAGTGTCCGATATGTAAATGTATTTACTTACGGTCTTCTTTAGCTGTACATATGAGAGTGCATAATGGTGAGCGGCCATACGAGTGTCAAGTTTGCTCTAAAGCTTTTAGTACGAAATGGAATTTACAATTGCACAAATGGACGCATGCAGCAAGAAGTACTAAACCATTTAAATGTAATCAATGCAGTGCTGCCTTTTATCGACATAGTGACTACACGGCACATATGAATTCTCACAGAAATGTACGGCCTTACACGTGCAATTACTGTGGAGCTCAGTTTATACGAAAATACAATTGTCTCAGGCATGTCAAGGAacatgaagaaaataaagctTATACATGTGATACATGTAATAAAACTTTTCACAGATCGTATTACCTCAAAGAACATTTGCGTGTACATTCGGGTGCAAAACCATATTCGTGTCATATTTGTGGTAAATTGAGTAGTACTAAATCTAATCACAATAAACATGTGAGAATTCATCATGCGCGAGAACCTGtaaatactgaaaattaa
Protein Sequence: MVGPTRVMITQDISIFYVGPTIVFMVELTAEYKVDIPLVFKVGSTLRRSIYIGQETSRMSTSYDLMARETWDESEGSDNEIGGSLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSFCTEVFECPKERRVHSTTVHKDAGPSNSRDPTQQTEMKDIKLLDGRMNMFEDIFVSGLHVQQTYHQPLLHQLQPPQQLDVGKSANDKKVDNLRIPTSMDIICNICNQSFTSEKSLQIHQRRMHIKESVKRVRENAKCQICNQEFPSVILFNAHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCSVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDTCNKTFHRSYYLKEHLRVHSGAKPYSCHICGKLSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389664;
90% Identity: iTF_01389664;
80% Identity: -