Sjap003601.1
Basic Information
- Insect
- Synergus japonicus
- Gene Symbol
- TFIP11
- Assembly
- GCA_900474275.1
- Location
- UCOH01004900.1:10812-13674[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-99 1.6e-95 320.3 15.3 1 275 400 667 400 667 0.98 2 2 0.0075 90 2.9 0.0 156 203 678 724 671 737 0.72
Sequence Information
- Coding Sequence
- atgtctgaCGACGAAATAGAAAGCTTCGAAATCACAGACTATGATcttgaaaatgaattcaacCCAAATCGTTCTCGGCGTAAATTATCCAAAAAGCAACAAATGCTTGgAATGTGGGCTGATGACAgtgaagaggaagaagaaacTAAAAGCAAATCATTCAAAACTTTCAACAAAGGACCTAAAAACTACACAGCACCTGTTAATTTTGTCTCTGGAGGAATTCAGCAGGCCGGTCAGCCGAAAGACAAGAAAAAGaaggatgaggatgaggatgaggacGAGGAAGAGGAAGAATCTGGAAGGCCTAGAAGAGGAGAAACTGATTATGTGCCAAACAGTTCAAgtgACTCGGAAGTTGAAGCACCCAGGAATATAAGATCTCGAAAAGCCTTCTCTCTCAATACAGATGGCGATATTGCAGGtctgagaaaaaagaagacaCCTTTTAATCCTGCTCTTGTGAAAAGTGGCTTAGGAAACTGGGAAGTTCACACAAAAGGAATCGGAGCAAAACTTTTACTCAAGATGGGTTTTGAACCAGGCAAAGGTTTGGGAAAAAATCTTCAGGGTATAGATGCTCCAGTCGAAGCTCAGCTTCGGAAAGGAAGAGGAGCGATTGGTGCCTATGGACCCGAAAAGTTTGCAAAGATTgctgaaaaaaagagagaagaagTAAGCGAAGAACCGAAAGAACAAAAAGGCAAAACCTCCCAATGGAGAAAGAACGATGCTGGagcaaaaaagaaagttaGGTATTGTTATCGAAGTGTGGATCAGGTTATTGAAGATGGAAAGTTCAAACCTAATAGAAATGTAGGTGTGAGTAGCGAAATGAGTAGAGTCAAAGTCATAGATATGACAGGACCAGAACAGCGAGTTTTAAGTGGTTATCATGCCATTAGAAGTGGACAACAACGTCCAGATGAATCCTTATTgatttctgataaaaaatcCAAAGCTAACTTTACCTTGCCTGAACTTCAGCATAATTTGGATCTTCTTGTAGATATGTGTGAACAGGATATTATCCAGAATGATAGAAAGAATCGACATCTGGGTGATAGGTTAATTGCTCTTGAAgctgagaaaaataatatttcgaaGGTTGTAGAACAAAATGGTCGCTTGATTGATACTTTGGAAAATGTATTGCAAATTGTGGAACGTCTGATGGAGGAAAGTAGTGAGTTGACGCTAAAGAAAACTGCAGAAGCTTTCAAGAGTTTGCAAGAGAACTATTATGAGGAGTATAAAACCTATGAGTTGGGAGAATTGGCTAGCAGTTTGGTGGGACCGAAAGTTAAGGAATCTTTGTTGACCTGGAATCCTTTAATGCAACCAAAACAACCCTTAGAGTTGTTTAAGCAGTGGAAAGATATTTTGGAAAGTGGGAAAACTACTCTTCAGACGAGGTCTTTACATCCTTATGATCAGCTTGTGTGGAATGCGTGGATGCCGTCGATAAGAGGAGCCGTACAaGAGTGGAGATGTAGAAAACCTGACCCACTGATCGATCTAATAGAAGATTGGATGCCTTTGCTCCCTAGCTGGATATTGGACAATATTTTAGATCTCTTAGTTCTTCCCAAATTAACTCTCGAAGTAGAGGAATGGAACCCATTAACAGATACTGTTCCAATTCACACCTGGATTCATCCTTGGCTTCCTCTTTTACGTAATCGATTAGATATCCAAATTTATCCAATAATTCGCCGCAAACTTGGATCAGCGCTTGGTGGTTGGCACGCATCCGATAGATCAGCAAGATTGATGTTGGAACCCTGGTCTCAAGTATTCCCAAAAGGAGACCTGGAGGCCTTCCTggttaaaaatattgtccCAAAACTTCAGATAGCACTTACGGAACTCGTGATAAATCCTCATCAGCAGCATTTAGACCAATGGCACTGCGTTTACGAGTGGAAAGAGCTACTTCCGGTCCACATTATGTCGGGGTTGCTTGACAAGTTCTTTTTCCCGAAGTGGCTTCAAACCTTGGCTCTTTGGCTGAATCATTCGCCCAATTATGAACAGGTTACGAATTGGTACCTCGGGTGGAAAGGTCTGCTCAACGAGAAATTATTAGAGGAACCAATTATAAAAGAACATTTTAGGAAGGCTTTGGATATGATGAACAGAGCTGTTTCCATTCCTGAAGGTCTTCAACCAGGAGCTATGGAACAAGTCTCCTATTTGACGAGTTTGGAAAGGAGTCAACCACCGATATCACAAATTCCTTCTAATATCCAACCAAGAATTGAGAGTATCGCAGAAGCAATGAGGATTGTGAATCAAATCCCACATGGATTTAAAGACTTCGTGCAGAATAAATGCGAAGAGAGAGGAATTCTCTTCATGCCGATTCCGAACAGATACCGAGAAGCAAAACAAGTTTACAAAGTTGGAAATATGCAAGCATATATTGACGGAAATGCTATCTTCGTTTGTCATGGTGGTACCAGTTGGGTTCCTACTAATTTGAATGCCCTCTTAGATATGTGTGAGATCTAA
- Protein Sequence
- MSDDEIESFEITDYDLENEFNPNRSRRKLSKKQQMLGMWADDSEEEEETKSKSFKTFNKGPKNYTAPVNFVSGGIQQAGQPKDKKKKDEDEDEDEEEEESGRPRRGETDYVPNSSSDSEVEAPRNIRSRKAFSLNTDGDIAGLRKKKTPFNPALVKSGLGNWEVHTKGIGAKLLLKMGFEPGKGLGKNLQGIDAPVEAQLRKGRGAIGAYGPEKFAKIAEKKREEVSEEPKEQKGKTSQWRKNDAGAKKKVRYCYRSVDQVIEDGKFKPNRNVGVSSEMSRVKVIDMTGPEQRVLSGYHAIRSGQQRPDESLLISDKKSKANFTLPELQHNLDLLVDMCEQDIIQNDRKNRHLGDRLIALEAEKNNISKVVEQNGRLIDTLENVLQIVERLMEESSELTLKKTAEAFKSLQENYYEEYKTYELGELASSLVGPKVKESLLTWNPLMQPKQPLELFKQWKDILESGKTTLQTRSLHPYDQLVWNAWMPSIRGAVQEWRCRKPDPLIDLIEDWMPLLPSWILDNILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDIQIYPIIRRKLGSALGGWHASDRSARLMLEPWSQVFPKGDLEAFLVKNIVPKLQIALTELVINPHQQHLDQWHCVYEWKELLPVHIMSGLLDKFFFPKWLQTLALWLNHSPNYEQVTNWYLGWKGLLNEKLLEEPIIKEHFRKALDMMNRAVSIPEGLQPGAMEQVSYLTSLERSQPPISQIPSNIQPRIESIAEAMRIVNQIPHGFKDFVQNKCEERGILFMPIPNRYREAKQVYKVGNMQAYIDGNAIFVCHGGTSWVPTNLNALLDMCEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01390211;
- 90% Identity
- iTF_01390211; iTF_01394296; iTF_01391100; iTF_01393516; iTF_01392766;
- 80% Identity
- -