Sito017995.1
Basic Information
- Insect
- Synergus itoensis
- Gene Symbol
- spop-b
- Assembly
- GCA_904066005.1
- Location
- CAJFCP010000171.1:227173-229290[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.1e-24 4.2e-22 79.2 0.3 4 109 147 250 144 251 0.93 2 5 2 7.4e+02 1.1 0.0 79 107 252 280 248 282 0.84 3 5 5.3e-19 2e-16 60.9 0.2 8 109 463 563 456 564 0.92 4 5 0.65 2.4e+02 2.7 0.1 80 108 566 594 561 596 0.85 5 5 3.8 1.4e+03 0.2 0.0 56 83 606 633 598 639 0.81
Sequence Information
- Coding Sequence
- ATGGAACCAAAGCCGATAATACATTTGTTTGGCGAGTCCTATTGCGCGTGGACACTAATAAAAAAGGATTTTACGACCTTCCAAGAAAAAGAGTTTGTCACGTCGCCTCTCTACTGTGCCAAAGAGTTCGCCAATTTGGAATGGGTTTTCTTGTTGGAAAAATCAGGGAAATCTAGCTACGATTGCATCCTCCGCACGAAAAAATGTATTGACGAAAATCCGTCTCGACAATTGACTTTCACAATACATATTGTCGGTGAAGAAAATTTGTCGAACATTGTTTTTGTTAATGCTATTACAACGTGCAAACTACGAAAAAAATTTTTTCTTAACAACGCAAGAAATTGTAATCAAATTATTATATTTTGTAAAGTTACTTGTGACAGAGATGTCATGGATTGTGATAAAAAACCAGTCGAGTTTTTCAACAATGAACTGTTCTTCCTCAACGAAAAGTTTAGCGATTTCGTATTTATCGTTGGAGAAAATCGATATCCTGCACATAAAATGATACTTGCCGCAAATAGTCCTGTTTTCACAGCAATGTTTTCCTGTGAAATGAAAGAAAACTGTCTGAACCAAGTGGAAATCGAAGACTTCGAACCCGAGTTGATACAAGAATTTTTATGCTTCTTGTACAAAGGCAAGATTTCAAATTGGGAAAAGTTTGGACGCAGACTCTTTGCAGTTGCTCATAAGTATGAAGTCGAAAGTTTGAAAAGTAAATGTACATTATTCTTGGAGAACAACTTGAATGTTAAAAATGTGATTGATCTTCTCATTTTTTCGGAACAGTATAGTATCGAAAATCTCAAGAAGAATTGTATTTCTTTGATCAACAAAGAATTCAAAAGGATTGAAGAACAGGAAAATTATCAGAATCTGCGAAAAACACATCCTGATCTTCTTACAGATATTTTTAATAGCGCAACCAGAAAAGTGGAAGAACCGAAAGAACCGAGATCAGATCAGCACTCCAGTTTCAAATATGAAATAATGAAATCCGGTGTGTGGACTATTAACTCAATCAATATTGTAGAGATTTTACGATTTCCTTTCGTTGAAATTAAGGAATTTTTCTGGACGTTCATTATATTGCGAAGAAAAAATGGCAAAATATACCTTTGTCTGGGTAAAAGAAATAAACCAGGATTTCACATTACCAATGATTCGTTGAAATTTAAGGTTATTGTTCAAAGTGCTAAGAGAGCTATAGTGGAAGTCAAGATTGAAGATACTCTGAATGGGTATAAAATAATATCCTTGGATGAAAGTGCTCCAAACTTGACCATATTTTGGGAAATTGAATCAATTTCTAAAGCTGATGAGATCCAGGAATCTAAAGATATGCGGCATTCTCCAAGCTACGAGCTTTTCTTTATGAACCCATATTTAAGCGATATCAATTTTCATAGCGAGGGAAAACAATTCCCTTCTCACAAATTGCTTCTCTGTAGTAAAAGTGCTGGATTCAGAAAGATCTTTTTATCTGAAAGAGAATCTCAGGAGAAAATTTTAAACCTTCAAGTCGATGAGATAAAGCCGAAAGTTTTGGAAGGATTGTTCAAGTTTATTTATAAAGGGATAGTCGAGAATCTGAATGATATAGCAACTGATCTTTACGTAGTGGCACAAAAGTACGAGATACACGATCTAAAACTTGTGTGCGAGAAAGCTTTGCTGAAAAAACTTGATTCAAAAAATGTAATATCAACTCTCATTTTTTCTGACAAGTATAACATGGAGTGTTTGAAGGATGAGTGTATTTTCCTGATTATTAAAGAGTCTATCAGATTTGAGAAAAATTTGGAAAGTTCGGAAAATGTGGATCCGAAGGTAATAATGGAAATTATACATGCAATCCACACTGGAAAAAGACCATTGATGATAAGAAATGTAAACAGGGATGTAACTTATTTTATAAACCGAACTTTGAAAGATAGTTTGTATATTTATGGACCGGAAATATTAAGCGAAATATTAATCGCGCATTTCGCTTTGGACAAGTGTGAAAGAATAATCGATAAAATGCTAAAAAGCTCTCTTACGTCCTGTTTAGCAGGATTTACTGCTGGATGTTTATTCGGTGTATATAAACGTGTTTTTCTACGTAATTAA
- Protein Sequence
- MEPKPIIHLFGESYCAWTLIKKDFTTFQEKEFVTSPLYCAKEFANLEWVFLLEKSGKSSYDCILRTKKCIDENPSRQLTFTIHIVGEENLSNIVFVNAITTCKLRKKFFLNNARNCNQIIIFCKVTCDRDVMDCDKKPVEFFNNELFFLNEKFSDFVFIVGENRYPAHKMILAANSPVFTAMFSCEMKENCLNQVEIEDFEPELIQEFLCFLYKGKISNWEKFGRRLFAVAHKYEVESLKSKCTLFLENNLNVKNVIDLLIFSEQYSIENLKKNCISLINKEFKRIEEQENYQNLRKTHPDLLTDIFNSATRKVEEPKEPRSDQHSSFKYEIMKSGVWTINSINIVEILRFPFVEIKEFFWTFIILRRKNGKIYLCLGKRNKPGFHITNDSLKFKVIVQSAKRAIVEVKIEDTLNGYKIISLDESAPNLTIFWEIESISKADEIQESKDMRHSPSYELFFMNPYLSDINFHSEGKQFPSHKLLLCSKSAGFRKIFLSERESQEKILNLQVDEIKPKVLEGLFKFIYKGIVENLNDIATDLYVVAQKYEIHDLKLVCEKALLKKLDSKNVISTLIFSDKYNMECLKDECIFLIIKESIRFEKNLESSENVDPKVIMEIIHAIHTGKRPLMIRNVNRDVTYFINRTLKDSLYIYGPEILSEILIAHFALDKCERIIDKMLKSSLTSCLAGFTAGCLFGVYKRVFLRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -