Sito023320.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus itoensis
Gene Symbol
PAXBP1
Assembly
GCA_904066005.1
Location
CAJFCP010000075.1:2506834-2512105[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-28 2.5e-24 87.1 3.1 2 272 518 727 517 729 0.92

Sequence Information

Coding Sequence
ATGTCAATAATGGAGTCTGAAGATACTCAGCCTGTCAAAATTAAACCAAAGAAGAAGGAAAAATCTAAACAAACGCTCCTTAGCTTCGGAGAGGAGCTCGAAGAAGCGGATGAGGGGGAAGTTTTTAAAGTGAAGAAATCATCGAGAAGCAAAAAACTGATGAAACAGCTAGATCACGAAAGAAAAAAAAAGAAAGGTGAAGAGAAAATGCAAGTGGACTCTGAATCAGCGAACATGTCTGTTAAGCAGGAAAAAGATTTAGAAATAAAGACAGATGATCTAGTAGTTAAAATAAAAAACACAGGACCCCTTATACTAAATGGAAGGGCTGCATTGACTGCAGGAAAGGATGACTACTCGTCCAATGAAGAGGATGAGAACGAATTTCAAGGGCATAAATTTCAGAGGCACCGTGAAGACCGGACAGATACTATGAAAATGTTTTTAGAAAGTGGATGTATACCTGACCCTGCAATGATTCATGCGGCAAGAAAGCAAAGGCAAAAGGCTCGGGAATTAGGAACAGATTATATTCCCATTCAGGAGAAAAGTGAAATTAAAGGAAAATCGAGGTTAATCAGAGAAGAAGATCATGACAGGAGCGATGATGATTCTCAAGATAGGCTTGATATGTTGGTCAGCACCGAAGCGCGTGATAAAGAGAAAAGACGGGAAGCAATCTTTGCTTCGCAACTTACAAACAATTTTTCAGATGATGAGGAGAGCGAGCATGGTAACGGTGAAGAGGAATGGGAAGCTCAGCAGTTTAGAAAGGGTGTAACTGGAGCTCAGATCGCAGCTGCCCAAGAATCTCTAATGCAACAGCAGTATATGGGAATGACCGTAAATCCAATGATGACCCCAGGAGTGCCGATGGAAATAATAATGATGCCAGCACCTCCGCCTCCACCGTTGATTCATCCACCCGATCCTACGAAAGTTGTTCCTGTCGCTCCAGAGGAAATTTTAAATAAAATGCGTGGAAGATTGCAGAGTTTGAAGGAAGTCCATCGACGTCATCAATTGGATTACGAGCAGTTACAGCTAGAATTAGTGCAAACGGTGAAGGAACTGGACGAGGGAGAAGAATGTGCACCGCTGTTAGCACGACGCTTCAAAGATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCAAATTCTTGGACTGGAGCAACGCTGGCTAGATCTTTATAGCGAGCGATCACTTGAAATCATGGAGAGACGTCGACAAGACACGAGAGATCAGGCTGAAGAAATTACCACTGCTGCAAGAGGCCAAACTGTAAGGCGAGGCCCAGAAGATGATGCTCGAATTCGAAGGGCCACGGAAAGAGAGGGAAGACGAGCTCGACGCAGAAGAGCTCGAGAATTGACTCCAACTTTACCGAGACACTTAGACGGAATGTCGAGTGATGACGAAGTTACGGAACAGAAAAATCTCGCTTTTAAACAAACTAAAGAGGAGATCGACGAAGAAACTAAGGATGTTTTCTCCGACGTAGTGGATGATTTTTGTACCATAAAAGGAATTCTTTCCAGGTTCGAAGCATGGAAATCAAGAGATTTTGAAGCATACTCGGATGCTTACGTTTCTATGTGTATACCGAAAATGATTTCTCCTCTAATCAAATTGCAACTTGTTACCTGGAATCCTATAATGGAAAGTGCCGATTTAGAACGAACAAAATGGTATAGTTCGTTACTTTTGTACGCTTGGGACAGCAAGGAAACAGAAGAATCACTAAGAAAAGATCCGGATATTCGAGTAGTTCCATCTACTATGGAAAAAATTGTCATTCCTAAATTAACTTCTATTGTCGAAAAGGTTTGGGACCCCATGTCCACTTCTCAAACTCTTCGTCTCGTAGGAACTGTTAATCGATTAATAAGAGATTATCCAAATATGAACGATGAGAGTAAAATATTACAATCGCTTTTCAACGCAATCTTTGATAAAATCCAATCTGCTGTAGAAAATGATGTCTTCATTCCAATTTTCCCTAAGCAAGTTTTAGATCCTAAACATCAATTCTTTCAAAGACAATTTGCAATGGCGGTGAAGCTTCTAAGAAATTTGCTGAGCTGGCAAGGACTTTTAGGAGACAACAGGCTGAAGAATTTGGCTTTAGGATCACTTTTGAATCGATACCTTTTAGCTGGATTGAGAGTTTCTCCACCAACAGATGCGCTTTCAAAAGCGAACATGATTATGAGCACTCTTCCTCGTGCCTGGCTACAAGGGGAAACGATTGAACAATTGAAGATGTTCGCTACTTTAATTCAACAACTGAGTGATCTTTTGGATCAAGCAAATCCGGCTCACAATGAAGCTTGGGAGTATTCGAAAGCTATTCTGAAAATAATTAAGCCTTCTTGA
Protein Sequence
MSIMESEDTQPVKIKPKKKEKSKQTLLSFGEELEEADEGEVFKVKKSSRSKKLMKQLDHERKKKKGEEKMQVDSESANMSVKQEKDLEIKTDDLVVKIKNTGPLILNGRAALTAGKDDYSSNEEDENEFQGHKFQRHREDRTDTMKMFLESGCIPDPAMIHAARKQRQKARELGTDYIPIQEKSEIKGKSRLIREEDHDRSDDDSQDRLDMLVSTEARDKEKRREAIFASQLTNNFSDDEESEHGNGEEEWEAQQFRKGVTGAQIAAAQESLMQQQYMGMTVNPMMTPGVPMEIIMMPAPPPPPLIHPPDPTKVVPVAPEEILNKMRGRLQSLKEVHRRHQLDYEQLQLELVQTVKELDEGEECAPLLARRFKDYQELRGYVTDLVECLDEKLPQILGLEQRWLDLYSERSLEIMERRRQDTRDQAEEITTAARGQTVRRGPEDDARIRRATEREGRRARRRRARELTPTLPRHLDGMSSDDEVTEQKNLAFKQTKEEIDEETKDVFSDVVDDFCTIKGILSRFEAWKSRDFEAYSDAYVSMCIPKMISPLIKLQLVTWNPIMESADLERTKWYSSLLLYAWDSKETEESLRKDPDIRVVPSTMEKIVIPKLTSIVEKVWDPMSTSQTLRLVGTVNRLIRDYPNMNDESKILQSLFNAIFDKIQSAVENDVFIPIFPKQVLDPKHQFFQRQFAMAVKLLRNLLSWQGLLGDNRLKNLALGSLLNRYLLAGLRVSPPTDALSKANMIMSTLPRAWLQGETIEQLKMFATLIQQLSDLLDQANPAHNEAWEYSKAILKIIKPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01392767; iTF_00011093; iTF_00200747; iTF_00879630; iTF_00882023; iTF_00880446; iTF_00064447;
90% Identity
iTF_01392767; iTF_00200747; iTF_00011093;
80% Identity
-