Sito008299.1
Basic Information
- Insect
- Synergus itoensis
- Gene Symbol
- NFKB1
- Assembly
- GCA_904066005.1
- Location
- CAJFCP010000074.1:1648735-1656333[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-27 5.1e-24 85.9 0.5 1 168 25 216 25 217 0.86
Sequence Information
- Coding Sequence
- ATGTCTCCCACAGAGAATAATATGAAAAGACAACGTGAAAAAATTCGCAACAACTATGTTAAACAACCTAAAATAAAAATTTTGGTTCAGCCTGTGGGTAAATTTCAATTTCGATGCAATTTTGTGTTAAATAAAATCGAGGAGAGTCTTTTGGGACAGATAAATGACACAAACCATGAAAAAGAAGAATTTCCAACAGTTATGCTTACCAACTATCATGGAGACGCTCTGATCAGATGCTCCCTTGTTACATCGAAAGAGGAAAAAAGAATGCTACATGCTCATAATTTGTTAAGAAGGGATGGAAATCAAGTCTTTCTGCAAGATTTTCACGAAATTGAAGTTTCAGCCAATAATGGTTATAAAGCTGCATTTCATGGAATGAGTATAATTCAAACACCGGAAGAACAGATAAAAAGGGAGTTATTTAGAAAGAAAAAAATAGAAGCTCGTGAAAAGATTAACCTGAGCGAGAGTGAAAGAAGTTTCAGTGAAACAGAAATTGAAAAGATCGAGAAAGAAGCTGATGACGCAGCTAGGACTATAGACCTTAAAAGTGTCGCTCTTTGCTTCGAAGCATTTTTTCGAAATAGCAATGGTATTTTATCAAAAATTACTGAACCGGTTTATTCTAAACCTATTGAGAATCTGCAACCCCCTTTGACTAAAGAACTCAAAATTTGTCGAACTAACGCCTTTAAAAGCTGTTGTACAGGATCTGAAGAGATTTTCATTTTCGTCGAAGAAGTAGACAAAAACGATATTCAAATCGAGTTTTATGAATTAGACGAATTGGATAATGTGATCTGGACTGATTATGGTCAATTTACGGAACGAGATATCCATCGTAACTGCACGATTGGTTTTAGAACACCGGCTTATAAAGACACAAATATTACTTCGTCGAAGACAGTATATTTTAAATTAGTCAGACCATCAGATGGAGCTTCTTCAAACAGTATCCAATTTTCTTTCGAACCAGTTGAAGGAAACAATAATGTGACATTAGGGCAAAAATCCGATTTTTTGCAAGTGAATCCCAAAAGTAAGAACCTTACTAGTGAATTTAACACAATGGAAAATTACGCAGCCTTGGAAGATGTTTCTGAAACGATTTGTGATGATGAGACATTTAATTCAGAAGATATAAAAACTAGAATTTCTGACATTAATATGGATCTTACTGATGATAATCAGGATTCGAGAGACAGCGATTTGAGCTTGAACATTTCCGAAACCGATGAAGAATTGCAGTCAAGGGATTATTCAATGTTTATGCCAAATATTCTGATAAAAATACTTGATGTTATGGATGAAAATCCTGCTGATGAGAAAATAAGAATTATGGATATTTTAAAAGAGGTCACTAAATTTGGAGAAACTCCTCTTCATGTTGCTCTTCTTTATAACCAGAATGAAAATGTTGAGGCACTTTTAACAATTCTAAACCTCTCTCCGGAGTTTAAATTCTTCATTGACGTAAAAAACTGCGTAGGGAAGACTGCTTTACATTACGCAGTTTTACGAAATCAACCAAAACTATTAAAATCAATTTTGTCAGCTGGTGCAAATCCAAATATTCCTGATGACACCAATAATACTCCTCTTCACGTTGCAGTAACTCTACCGGAAAGAATTGCATGTGTCGATCATCTGTTGTCAACTAAACCGAATCTGGAATCCCCGAATGAAGCAGGTTTGCTTCCTCTACATCTTGCATCTAGAGCCGGTTCCCTATATGCAGTTAAATCTCTTATAAAAGCTGGAGCGAATATAAATAGTAAAGACGTATTCCACGGTCGCACGGCTCTTCACATGGCCATTGAATGTGGTCATGTAAAAATCGTGAAATTTTTACTAAAAGAGACCAAAGTCGACGTCAATAAAAGGGATTTTCTGGGAAATACTCCTTTAAATCTCGCTATGAATATTGATACTTTTGAAGGCAGCGAAATTTTCAAATTGTTAACTCAATATAACGGAAATGCTTTAGAGCCTGGTGAAAAGTCTCTTCATGAGGACTACAGCATTGATATTCAGATGCAAATTGAAAAAGAATCCTCCAAGGATGTAGAGGAAAATAAAAGAACTTTATTAGATCGCGGGAACAGGAAATTTGACAATGCTTCGAGTTTTGCGGCAGATTTGCTAGTAAAAGTACTTAATGTTATGAAAGAAAATCCACTTGATAAAAGAAATAGGATTATGAATTTGTTGAAAGAACTGACAAATTGTGGAGACACGTCACTTCATGTAGCTCTTCGTTATAATCAAACTCAAACAATTGAGTCTCTGGTAGAGATTTTGAACCTCTATCCTGAACTTAAATTCATCGTTAATGCGAGAAACAATTTTGGAAAGACTCCCCTGCATTTTGCAGTTGTGAGAAATCTGCCAATAGTTGTAAAAGCTCTCTTAATATTAGGTGCAGACCCTAATTGTAAGGACGAAGACGATTGCTGCCCTCTTGATATTGCAATTGCTTTGCCAGACGGAACTGATTGCGTGGATGTTATTTTATCAGCAAGCAAGAGTTCAGATATTCCTAAAGACAAGTATTTACACCTTGCTGCTAAAATTGGTTCTTTAGATTCTCTTAAATTGCTAATCAAAGCAGGAGCAGATGTAAATTCTGTAGATGTTAATTGCGGTCGGTCTGTTCTTCACTTTGCAGTTGAAAATCTTCATAAACATATTGTGGAATATTTACTACGTGAGACTCAAATTGATATTAATGTGAAAAATTTTGAGGGTAGGACTGCTTTTCAAATTGCCATGACTTTAAAAGGATTTAAAGCCGAAGAAATTTGCGCATTATTAATTCGAGCAAGATTAAGATTAAGATTACTCTAA
- Protein Sequence
- MSPTENNMKRQREKIRNNYVKQPKIKILVQPVGKFQFRCNFVLNKIEESLLGQINDTNHEKEEFPTVMLTNYHGDALIRCSLVTSKEEKRMLHAHNLLRRDGNQVFLQDFHEIEVSANNGYKAAFHGMSIIQTPEEQIKRELFRKKKIEAREKINLSESERSFSETEIEKIEKEADDAARTIDLKSVALCFEAFFRNSNGILSKITEPVYSKPIENLQPPLTKELKICRTNAFKSCCTGSEEIFIFVEEVDKNDIQIEFYELDELDNVIWTDYGQFTERDIHRNCTIGFRTPAYKDTNITSSKTVYFKLVRPSDGASSNSIQFSFEPVEGNNNVTLGQKSDFLQVNPKSKNLTSEFNTMENYAALEDVSETICDDETFNSEDIKTRISDINMDLTDDNQDSRDSDLSLNISETDEELQSRDYSMFMPNILIKILDVMDENPADEKIRIMDILKEVTKFGETPLHVALLYNQNENVEALLTILNLSPEFKFFIDVKNCVGKTALHYAVLRNQPKLLKSILSAGANPNIPDDTNNTPLHVAVTLPERIACVDHLLSTKPNLESPNEAGLLPLHLASRAGSLYAVKSLIKAGANINSKDVFHGRTALHMAIECGHVKIVKFLLKETKVDVNKRDFLGNTPLNLAMNIDTFEGSEIFKLLTQYNGNALEPGEKSLHEDYSIDIQMQIEKESSKDVEENKRTLLDRGNRKFDNASSFAADLLVKVLNVMKENPLDKRNRIMNLLKELTNCGDTSLHVALRYNQTQTIESLVEILNLYPELKFIVNARNNFGKTPLHFAVVRNLPIVVKALLILGADPNCKDEDDCCPLDIAIALPDGTDCVDVILSASKSSDIPKDKYLHLAAKIGSLDSLKLLIKAGADVNSVDVNCGRSVLHFAVENLHKHIVEYLLRETQIDINVKNFEGRTAFQIAMTLKGFKAEEICALLIRARLRLRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -