Sgif012328.1
Basic Information
- Insect
- Synergus gifuensis
- Gene Symbol
- spop-a
- Assembly
- GCA_904066015.1
- Location
- CAJFCO010013690.1:257-2365[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.3e-21 4.8e-19 69.3 0.2 4 109 140 243 137 244 0.92 2 5 0.36 1.3e+02 3.6 0.1 79 107 245 273 237 275 0.84 3 5 8.3e-23 3e-20 73.2 0.7 8 109 458 558 453 559 0.94 4 5 4.6 1.7e+03 0.0 0.0 80 107 561 588 557 591 0.83 5 5 0.99 3.6e+02 2.2 0.0 55 83 600 628 586 647 0.81
Sequence Information
- Coding Sequence
- ATGGAACCAAAGCAGATAATACATTTGTATGGCGAGTCGTTTTGCGCATGGACACTAGCAAAAAAGGATTTTATTACCTTCCAAGAAAAGGAGTTTATCAAGTCTCCTCTCTACTGTGCCAAAGAGTTCGCCAATTTGCAATGGGTTTTCTTGTTGGAAAAATCTGGGAAAAATAGCTACGATTGTATCCTCCGCACGAAAAAATGTATTGACGAAAATCCATCTCTACAATTGACTTTCAAAATATATATTGGCGGTGAAGAAAATGTATCAAAAATATCTTTTGTTAATACAATTACAACATCCAAATCAAGAAGAAAATTTTTTCTTCGCAACGCAAGAAGTTGCGATCAACTTATCATAACATTTAGTGTTATTCGTACTGAAAAACCAGTCCAATTTTCCAACAATGAACTTTTCTTCCTCAACGAGAAGTTCAGCGATTTCGTATTTATCGTTGGAAAAAATCGATATCCTGCCCATAAAATGATACTTGCCGCAAACAGTCCTGTTTTCACAGCAATGTTTTCCTGTGAAATGAAAGAAAACTGTCTGAACCAAATGGAAATCGTAGACTTCGAACCCGAATTGATACAAGAATTTTTATGCTTCTTGTACAAAGGCAAGATATCAAACTGGAAAAAGTTTGGACGCGGACTCTTTACAGTCGCTCACAAGTATCAAGTCGAAAGTTTGAAAAGTCAAAGTCAATTATCCTTAGAGAAAAACTTAAACGTTAAAAATGTGATTGATCTTCTCATTTTTTCGGAACTTTATACCATCGAAAGTCTCAAGAAGAAGTGTATTTCATTGATCAACAAAGAATTCAAGAGGATTCGAGAACAAGAAAATTATCAGAATCTGCGAAAAACACATCCTCAGCTTCTCATAGATATTTTTAATGACGCAACCAAAAAAGTGCAAGTACCGATCAATCCGAGATCAGATCAACCCTCCAAGAAATGCATCAAGGATGAAACAATAAAATCCGGTGTATGGATCATCAACTCAATCGATATAAACACTTTACGATTTCCTTTCATTGAAATGAAGGAATTTCTTTGGACACTATATACATGGCGAGATAAAAATGGCAAAATATACCTCTGTCTGTGTAAAAAAAATAAACCAGGACTTCGCATTACCAAAGATTCGTGGAAATTGAAGATTGTTGTTCAAAAATCTATGAAGAGACTTAAAGGGGAAGTAATGATTGTAGATGAAAAGAATGGCTATGGTATAATGCTAGTGGATGAAATTGGTTCAAAATGTACAATACTTTGGGAAATGGAATCGATTTTTAAAGCCGATGAGATCCAGAAATCTAAAGACATCCGTCATTCTCTAAACTACGAGTTTTTCTTTATGAATTCATATTTAAGCGATGTAAATTTTCACAGCGGGGGAAAACAATTCCCTTCTCACAAATTGCTTCTCTGTAGTAAAAGTGCTGCATTCAGAAAGATCTTTTTATCTGAAAAAGAATCTGAGAAGAAAGTTTTAAACCTTCATGTCGATGAGATAAAGCCGAAAATTTTGGAAGAATTGCTCAGATTTATTTATACAGGGATAGTGGAGAATCTGAATGATGTAGCAACTGATCTTTACGTAGTGGCACAAAAATACAAGATGCAAGATCTAAAACTTATGTGCGAGAATGCTTTGCTGAAAAATCTTGTTACAAAAAATGTAATACCAACTCTCATTTTTTCTGACAAGTATAATGTGGAGTGTTTGAAGGATGAGTGTATTTTTCTGATTGTTAAAGAGTCTATCAGATTTGAGAAAAAGTTGGAAAATTCGGAAAATGTGGATCCGAAGATATTAATGGAAATTATAGATGCAATCCACACTGGAGAAAGACCATTGATGATAAGAAATCTAAATCAGGATGCATCATATTTTATAAACCGAACTTACAAAGATATTTTGTGTATTTTTGCATCGGAAATATTAAACGGAATATTAAACGCGAATTTCACTTCGGTCAAGTGTGAGAGGACAACTGAGAAAATGCCTATTCTTGCGATGAGTTTAGCAGGATTTGCCGCTGGATTTTTATTCGGTGTATGTAAAAGTATTTTTGTACATAATGCAAAGTTACAATAA
- Protein Sequence
- MEPKQIIHLYGESFCAWTLAKKDFITFQEKEFIKSPLYCAKEFANLQWVFLLEKSGKNSYDCILRTKKCIDENPSLQLTFKIYIGGEENVSKISFVNTITTSKSRRKFFLRNARSCDQLIITFSVIRTEKPVQFSNNELFFLNEKFSDFVFIVGKNRYPAHKMILAANSPVFTAMFSCEMKENCLNQMEIVDFEPELIQEFLCFLYKGKISNWKKFGRGLFTVAHKYQVESLKSQSQLSLEKNLNVKNVIDLLIFSELYTIESLKKKCISLINKEFKRIREQENYQNLRKTHPQLLIDIFNDATKKVQVPINPRSDQPSKKCIKDETIKSGVWIINSIDINTLRFPFIEMKEFLWTLYTWRDKNGKIYLCLCKKNKPGLRITKDSWKLKIVVQKSMKRLKGEVMIVDEKNGYGIMLVDEIGSKCTILWEMESIFKADEIQKSKDIRHSLNYEFFFMNSYLSDVNFHSGGKQFPSHKLLLCSKSAAFRKIFLSEKESEKKVLNLHVDEIKPKILEELLRFIYTGIVENLNDVATDLYVVAQKYKMQDLKLMCENALLKNLVTKNVIPTLIFSDKYNVECLKDECIFLIVKESIRFEKKLENSENVDPKILMEIIDAIHTGERPLMIRNLNQDASYFINRTYKDILCIFASEILNGILNANFTSVKCERTTEKMPILAMSLAGFAAGFLFGVCKSIFVHNAKLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -