Sgif023337.1
Basic Information
- Insect
- Synergus gifuensis
- Gene Symbol
- SUB1
- Assembly
- GCA_904066015.1
- Location
- CAJFCO010000086.1:2322330-2323225[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 1.1e+04 -3.2 0.9 27 34 20 27 18 29 0.61 2 2 1.5e-23 4.8e-19 68.4 0.4 1 51 54 104 54 105 0.95
Sequence Information
- Coding Sequence
- ATGCCAAAATCAAAAGAATTTGTTGAAAGTGACGACAGCAGTAGCAGTTCAGAGACTGAGAAGAAAGGAAAGAAGAGGCCGAAGAAGGAGATTAAAGATAAGGAGGCTAAAGGTGGATCATCAAACAAAAAATCCAAAAACGATTCGGGAGAACCAATCTGGGACTTAGGTCAAAATAGACAAGTCACTGTTCGCAAATGGAAAGGAAAAACATACATTGACATTCGTCAGATGTTCCTTGATGCAAAAGGAGATTGGAGACATGGCAAAGGAATATCGTTGACCCCAGAACTGTGGAATAATTTCATGGAAGTGGTGGAGGATGTTAACAAGACTGTCAAGGAACAATGTTAA
- Protein Sequence
- MPKSKEFVESDDSSSSSETEKKGKKRPKKEIKDKEAKGGSSNKKSKNDSGEPIWDLGQNRQVTVRKWKGKTYIDIRQMFLDAKGDWRHGKGISLTPELWNNFMEVVEDVNKTVKEQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389439;
- 90% Identity
- iTF_01389439;
- 80% Identity
- -