Basic Information

Insect: Synergus coniferae
Gene Symbol: L
Assembly: GCA_032164275.1
Location: JAUEJJ010000004.1:7284940-7297092[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.5e-05 0.0019 19.2 1.3 1 23 97 119 97 119 0.98

2 20 0.48 60 5.0 3.9 1 23 125 147 125 147 0.97

3 20 1.1e-06 0.00014 22.8 4.1 1 23 153 175 153 175 0.99

4 20 0.00012 0.016 16.3 0.4 1 23 181 203 181 203 0.98

5 20 9.1e-05 0.011 16.7 0.7 1 23 349 372 349 372 0.96

6 20 0.042 5.2 8.3 0.0 2 23 382 404 381 404 0.89

7 20 0.21 26 6.2 0.1 3 23 467 487 466 487 0.97

8 20 0.022 2.7 9.2 0.3 2 23 500 521 499 521 0.97

9 20 0.0016 0.2 12.8 0.7 1 23 530 553 530 553 0.93

10 20 0.1 13 7.1 0.2 1 23 558 581 558 581 0.92

11 20 0.58 73 4.7 2.0 2 23 654 675 654 675 0.96

12 20 0.0057 0.71 11.1 0.2 1 23 680 703 680 704 0.94

13 20 3.3 4.2e+02 2.4 0.1 2 23 783 806 782 806 0.81

14 20 5e-05 0.0063 17.5 1.0 2 23 822 844 821 844 0.96

15 20 0.042 5.2 8.3 1.0 1 23 853 876 853 876 0.93

16 20 0.077 9.6 7.5 0.0 2 23 1067 1089 1067 1089 0.92

17 20 0.17 21 6.5 0.4 1 23 1095 1118 1095 1118 0.95

18 20 2.7 3.4e+02 2.6 0.6 2 23 1131 1152 1130 1152 0.94

19 20 0.19 24 6.3 0.1 2 23 1161 1183 1160 1183 0.94

20 20 0.014 1.7 9.8 2.6 1 23 1190 1213 1190 1213 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.5e-05	0.0019	19.2	1.3	1	23	97	119	97	119	0.98
2	20	0.48	60	5.0	3.9	1	23	125	147	125	147	0.97
3	20	1.1e-06	0.00014	22.8	4.1	1	23	153	175	153	175	0.99
4	20	0.00012	0.016	16.3	0.4	1	23	181	203	181	203	0.98
5	20	9.1e-05	0.011	16.7	0.7	1	23	349	372	349	372	0.96
6	20	0.042	5.2	8.3	0.0	2	23	382	404	381	404	0.89
7	20	0.21	26	6.2	0.1	3	23	467	487	466	487	0.97
8	20	0.022	2.7	9.2	0.3	2	23	500	521	499	521	0.97
9	20	0.0016	0.2	12.8	0.7	1	23	530	553	530	553	0.93
10	20	0.1	13	7.1	0.2	1	23	558	581	558	581	0.92
11	20	0.58	73	4.7	2.0	2	23	654	675	654	675	0.96
12	20	0.0057	0.71	11.1	0.2	1	23	680	703	680	704	0.94
13	20	3.3	4.2e+02	2.4	0.1	2	23	783	806	782	806	0.81
14	20	5e-05	0.0063	17.5	1.0	2	23	822	844	821	844	0.96
15	20	0.042	5.2	8.3	1.0	1	23	853	876	853	876	0.93
16	20	0.077	9.6	7.5	0.0	2	23	1067	1089	1067	1089	0.92
17	20	0.17	21	6.5	0.4	1	23	1095	1118	1095	1118	0.95
18	20	2.7	3.4e+02	2.6	0.6	2	23	1131	1152	1130	1152	0.94
19	20	0.19	24	6.3	0.1	2	23	1161	1183	1160	1183	0.94
20	20	0.014	1.7	9.8	2.6	1	23	1190	1213	1190	1213	0.95

Sequence Information

Coding Sequence: ATGCTGTTCAAAGGTAACAGTTCGAGATTAGAACTgttaattggaaaaattcagGCGCATAAGGAACCTCAGTCACCACCAAGAGACGAAAAGTGCCTCTCCAAACCTAAAGaggCCCTCGGAACCGGAAGTTCGTCCTGGCACAGTGAAGACGGAAGGCCGACTTCCCGAAAGGGAGAAGAAACGCCATCTTCTTGCGCAACTCCTACATCTGCCAGTTTTCCTTCGGAACCGGAAGTGGAAGCTGATATTGGTCACACAGCCGATGGAAGTAATCCTGCCGCTCCATATCCTTGCCAATTTTGTGACCGAATGTTCCCCAGGTTAAGCTACCTGAAAAAGCACGAACAgAGTCATGGTGACCAGATGCCCTACAGGTGCAGTTGGTGTGCAAGATTATTTAAACACAAAAGAAGCAGAGATCGTCATGTAAAATTACACACCGGCGACAGGAGATATCGATGCTCGCATTGCGAGGCTGCTTTCTCGAGAAGtgACCACCTCAAGATCCACATGAAGACTCATGATACCCAAAAGCCTTTTCAATGCACCTCATGTTCCCGAGGCTACAACACAGCCGCAGCCTTGACATCTCACATGCAGAGTCACAAAAGACACCAAAATTCCCAAGGATCCAAACTGGAGATGGATTTTGGAAGAAGAAGTGTTTCCTCTCACAGTACAGCATCACCTCCCATTCCAAATTCACCTTCCCCAAGTCTAAATTTAACCCTCAACCAAAAAAAGTCCCAGGCTAGTGTATCCAACACTCCAGTCCTGTCATCACCTTTAAAACTAGCCTGCATGTACTGCACTCGAGATTCCTTCACCAGCATGCAGCAACTTCAACTTCACGTCCACACAATGCACCAAGCAATCCTGAGTGGAGAAAACCTGATGCCATCACCAGGTCAAACCCTGGAACTGTCAAACCACTCTAGAGAAAAATCTGACCGTCAGGAAAGAACCTTAAGAGAAGATCTGTACGACAAGAAGTTTTCGGAAGTTAGACCTTTGGAAGAGAAAGACATCTTCGATTCAGGATTCTCCTGTGGACAATGTACCATGAAGTTTTCTTCTTCAAGTTCTCTCAGGGACCATCTAGTTACGATTCATCGAACTAATGCTTTCGGATCATTGATGGTGTGTCCAATCTGTGGAATTCCGTGTTCTTCAGCAGCTGCCTATGCAGAACACTATGTTCTTCAACATTGCGAAAATAGAGTGTCTGCTGAAGGTCGAGAATATACTGATCCAAAGATGAATGGATCCTACGACACTAAAGAATCGAGAGTAGCTGAACgaggaaaaatatcaaataaggATCTAAATTCTGAACCTGCTGATCTAACTAAACACTCGAAGACTAGTGAAAATTACTCGGCGGGGACTTTACTCTGTGGACAGTGTGGAGCAGCTTTGAAAGACTTCGAATCCTTCAGAGAACACCTCGCAAGGCATCTTCAAGCTGATCAGAGAAATGAGGTTTCGAGAAATCAGTGTCCAAAGTGTGAAGCTTCTTTTCAGGAGAGGGAAGATATGATGGTCCATTTAACGAAACATTTTCTGGGTCAAGTAACCAAGGAATACGCTTGCAGTGCCTGCAAGAAATTTTATCCTCATCCTGATCTTCTTCAAAGGCACTTGCTTGATTCTCATGCTCATCATCTTTACAGGTGTGCCCTTTGTAGAGAAACTTTTGACTCCAGGGTAGCGATCCAAGTCCATTTTGCTGTGAAACACAGCCAAGAATGCCGGATATACAGATGCAATGTCTGTTCTGGGTCAAACAATGAGAATTCTCCTGGAAATACGCCTGGGGAAAACAGGAACTTCTTCAGGAGCGAAGCTGAAATGGCGAATCATGTTAAAACCGTTCATGCACCTCCGTCGATTGTAAACGAGAGTCCTGTTCCTAGGAGTCCTGCATCAACTCCAGGTATGACGAACACAAACCCAAGGTGTGTTTTTTGTGGAGTTTGCTGTTCCTCGGACTTGGATCTTCAGCTCCACTTGGCAAGCCACTCTACAAGTCTGTACCGATGTCCCATTTGTCGAGAGGGTTTTGCTGTTGAGTTTCTTTTGGATAGGCATATTGCTCAGACTCATCATGCCAGTGATCATCCGAGCACTCCAAGAAGTCACCCTAGGGAAAATGGAAGGATACATCGACCTTCCAGGTCTCAGGAAGATGCCATCAGTTTAGAAGTGAGGGAACAGAGGGATCAGAGAGAACCGAGGGATCAGAGGTCACTAAAACGAGGAAGATCCCCGGCTTCTAGTAATAACAATTCTTTAAACCAAAGAGACAATAATAACAAGAGACAAAACTTCGGAACTGCCCAGCAATGCGAGCTTTGTGAAAGAGGAGAATTCGCCAACGAAGCTGAACTACAAGCTCATAAAAAATTGGCCCACACTCCTGCAAAGGCTACAGGAAAATCTTTATCAGCTTTAAGCATGACTTGTGCTTATTGTGGTGAGGTTTGTCGATCTAGAAGTGAGTTAGAGTCGCATACGAGAATACAACATGCGACTAATGATCATGGAGGTCGCCACAAGTGTAACATCTGCGATGAAGTTTGTCCCTCTGGAGCAACTTTAGCTGAACACAAACTACAGAAACATTGCAAAATCCAGCTAAGTGATGTTTGCATTGTCTGCAGAGGCAATTTGTCTTCTGAATCCCACTTTTTGGAACATGTTCAAAGACACAGCTTAGAGAGTGTTGATCCCCAACAGAGGCTAGACAGTTCACTGCCTCAGCTTCCTGCACCTTGTGTAGTTTGTAGACAAACGTTGATCAGTGATTTTGAATGTAGGCTTCATGCGAGACATCATTTGAGGTCTAGTGGAGGTTCTCAGAGATCTGACTCGAGTCCGAGTCCTAATCAGAAGATTCAGAGTCACAATTGCTGTCTTTGTCTCAGGGAGTTTAATGGAGAGGAGTTTGTTAGTTTGCCTTCAAATCATTCCAGTAGTGGTAGTCAAACATTAAAAGTCTGTAGAGCTTGTTATGTGAGACATTCACAAGGTCTTCCAATTCTGAACTCACCTTATGAACATGCCAGGACTAGTCAAAGTGAATTGTGGATAAAGGAGTCACATTGGGATGGATCTAGGGAGAGATGGGATGCTGAAAGGAACTTCAAGGTGGAAGAGAGGAATTCTACTGATGGAGGATCAAATGATGAGAGAAGGTGTGAAGAATGTGGGGTGAAGTTTGAAGGTCCAGAGGAGGCAGAAAAACATAGGCTTGCTGAACATGAGAAGCCTGGGACTTATACTTGTATTCAGTGCCAGatgTCTTTTCCCACTGAGGCTAAAATACAGCAACACGTTAAGAAAGAACATCTTGAATCTACTAGGAAAACTTCTGTGGAAGCTTTGCGTTGTCATCTGTGTTTATTTAATGCTAATAGTCCTTTGCAGCTTCAGAGTCATCTTATAGAACACACTTTTGCTGGATGTACTGCTCTCAGTTGCTATATTTGTCAAGCCCTGTTCACAGCTCCCATTGGACTGCAGaatcataTGCTTCAGCAACATGGTCTTGGCGCTCGACCTTACGATTGCAGCCACTGTGACTTGAAGTTTTTCTTTAGGGCTGAACTTGATCATCATATCGCTGTTTTTCACTCTACgcgagaaaatatttcttctccTCAAGAGAGAAAAGTCCAAAACGATATTCAAGATTCAGAAAAACGAACTGAAGCTTCTGATAAAGTTACCGTCAAAGAAGAAATTCGACAAAGCAGTGAAAATGAGAATGAAGATATCAGtgtgaatattaataataaatccgAAAAACGGGAAAAAGCCTGTCTAAATCTCGAGTCTTCATCTGAAGAAATCCGAACCGAATGTCCCAAATCTGAGTAG
Protein Sequence: MLFKGNSSRLELLIGKIQAHKEPQSPPRDEKCLSKPKEALGTGSSSWHSEDGRPTSRKGEETPSSCATPTSASFPSEPEVEADIGHTADGSNPAAPYPCQFCDRMFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDTQKPFQCTSCSRGYNTAAALTSHMQSHKRHQNSQGSKLEMDFGRRSVSSHSTASPPIPNSPSPSLNLTLNQKKSQASVSNTPVLSSPLKLACMYCTRDSFTSMQQLQLHVHTMHQAILSGENLMPSPGQTLELSNHSREKSDRQERTLREDLYDKKFSEVRPLEEKDIFDSGFSCGQCTMKFSSSSSLRDHLVTIHRTNAFGSLMVCPICGIPCSSAAAYAEHYVLQHCENRVSAEGREYTDPKMNGSYDTKESRVAERGKISNKDLNSEPADLTKHSKTSENYSAGTLLCGQCGAALKDFESFREHLARHLQADQRNEVSRNQCPKCEASFQEREDMMVHLTKHFLGQVTKEYACSACKKFYPHPDLLQRHLLDSHAHHLYRCALCRETFDSRVAIQVHFAVKHSQECRIYRCNVCSGSNNENSPGNTPGENRNFFRSEAEMANHVKTVHAPPSIVNESPVPRSPASTPGMTNTNPRCVFCGVCCSSDLDLQLHLASHSTSLYRCPICREGFAVEFLLDRHIAQTHHASDHPSTPRSHPRENGRIHRPSRSQEDAISLEVREQRDQREPRDQRSLKRGRSPASSNNNSLNQRDNNNKRQNFGTAQQCELCERGEFANEAELQAHKKLAHTPAKATGKSLSALSMTCAYCGEVCRSRSELESHTRIQHATNDHGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDVCIVCRGNLSSESHFLEHVQRHSLESVDPQQRLDSSLPQLPAPCVVCRQTLISDFECRLHARHHLRSSGGSQRSDSSPSPNQKIQSHNCCLCLREFNGEEFVSLPSNHSSSGSQTLKVCRACYVRHSQGLPILNSPYEHARTSQSELWIKESHWDGSRERWDAERNFKVEERNSTDGGSNDERRCEECGVKFEGPEEAEKHRLAEHEKPGTYTCIQCQMSFPTEAKIQQHVKKEHLESTRKTSVEALRCHLCLFNANSPLQLQSHLIEHTFAGCTALSCYICQALFTAPIGLQNHMLQQHGLGARPYDCSHCDLKFFFRAELDHHIAVFHSTRENISSPQERKVQNDIQDSEKRTEASDKVTVKEEIRQSSENENEDISVNINNKSEKREKACLNLESSSEEIRTECPKSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980419;
90% Identity: iTF_00980419;
80% Identity: -