Scon009111.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- tfip11_1
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010000039.1:894989-897854[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-99 8.4e-95 318.1 13.3 2 275 398 664 397 664 0.98 2 2 0.046 6.5e+02 0.3 0.0 244 270 678 704 669 719 0.86
Sequence Information
- Coding Sequence
- atgtctgaagACGAAATAGAAAGCTTCGAAATCACAGACTATGATCTTGAGAATGAATTCAACCCATATCGTTCTCGACGTAAATTGTCCAAAAAGCAACAAATGCTTGgAATGTGGGCTGATGACagtgaagaggaagaagaaactAAAGGCAAACCatctttcaaaactttcaacaAAGGACCTAAAAACTACACAGCACCTGTTAATTTTGTTTCTGGAGGAATTCAGCAAGCAGGACAGCCGAAAGAAGAAAAACCTCAGGATGAGGACGATGAAGAGGAAGAATCTGGAAGACCTAGAAGAGGAGATAAGGATTATGTGCCAAACAGTTCAAgtgacTCTGAAGCTGAAGGACCCAGCAATGTGAGAAAACGAAAAACTTTCTCGCTCCATACAGATGGCGATATTGCAGGTCTGAGAAGAAAGAAGACGCCCTTTAATCCTGCTCTTACGAAAATTGGTTTAGGAAACTGGGAAGTTCATACAAAAGGAATCGGAGCAAAACTCTTACTCAAGATGGGTTTTGAACCAGGTAAAGGTTTGGGAAAAAATCTCCAGGGTATGGATGCCCCAGTTGAAGCTCAACTTCGAAAAGGAAGAGGAGCGATTGGTGCCTATGGACCCGAAAAGTTTGcaaaaattgctgaaaagaagaaggaagaagtAAGTGAAGAATCGAAAGAACAAAAGCGCAAAACTTCCCAATGGAGAAAGAACGATGCTGGAGGAAAAAGGAAAGTTAAATACTGTTATCGAAGTGTAGATCAGGTTATTGAAGATGGAAAGCTCAAACCTAATAGAACAGCAGGTATGAGTAGCGATATGAGTAGAGTCAAAGTCATAGATATGACAGGACCAGAACAGCGAGTTTTAAGTGGTTATCATGCCATCAGAAGTGGACAACAACGTCCAAATGAATCCTTATTGACTTCTGATAAAAAATCCACAGCCAACTTTGCCTTACCTGAACTTCAGCATAATCTAAATCTTCTTGTAGATATTTGTGAACAAAATATTATCCAGAATGATAGAAGGAATCGATATCTCGGTGATAGGTTAATTGCTCTTGAAGCAGAGAAAACTAATCTTGCGAAAGTTTTAGAACAAGAAGCGCATTCGATTGATATTATGGAAAATGTACTGCATATTGTGGAACAACTGACGGAGAAAAGTAGTGAGTTGACGCTGAAGGACGCTGCAGAAGCTTTCAAGAATTTGCAAGAGAACTATTATGAGATGTATCAAACATACGAATTGGGGGAGTTGGCTAGCAGTTTAGTGGGACCGAAAGTTAAAGAATATTTGTTGACATGGAATCCTTTGATGCAACCAAAACAACCTTTAGAGTTGTTCAAGCAATGGAAAGATATTTTGGAAAGTGGGAAGACTACTCTTCAGACGGGGTCTTTACATCCTTATGATCAACTTGTGTGGAATGCGTGGATGCCGTCGATAAGAGGAGCCATACAGGAGTGGAGGTGCAGAGAACCCGATCCGCTGATTAATCTAATAGAAACCTGGTTGCCATTGCTCCCTAGCTGGATATTGGACAATATTTTCGATCTTATAGTTCTTCCAAAATTGACTCTCGAAGTAGAGGAATGGAACCCATTAACAGATACTGTTCCAATTCATACTTGGATTCATCCTTGGCTTCCTCATTTACGTAATCGATTAAATACCCAAATTTATCCAATAATTCGTCGCAAACTTGGATCAGCGCTTGGTGGTTGGCACGCGTCCGATAGATCAGCAAGATTGATGTTGGAACCCTGGTctcaagtattttcaaaaggaGACTTGGAGGCCTTCCTGGTTAAAAATATCGTCCCAAAACTTCAGATAGCACTTGACGAATTGGTGATAAATCCTCATCAGCAGCATTTGGACCTATGGCACTGCGTTTATGAGTGGAAAGAACTACTTCCGGTCCACATTATGTCGGGGTTGCTCGACAAGTTCTTCTTTCCAAAGTGGCTTCACACCTTGGCTCTTTGGTTGAATAATTCGCCTAATTATGATCAGGTTACGGATTGGTTCCTCGGGTGGAAAGGCCTGCTTAACGAGAAATTATTAGCGGAACCagttataaaagaaaattttaggaaGGCTGTGATTATGATGAATAATGCCGTTTCCGTTTCTGAAGGTCTTCAACCGGGAGCTGTGGAACAAGTCTCCTATTTAACTAGTTTGGAAAGGAGTCAGCCACCCATTTCACAAATACCGTCTAACGTCCAACCAAGAATTGAGAGTATCGCAGAAGCAATGAGGAATCGCGTGAATCAAATCCCACATGGATTTAAAGAACTCGTACAAAATAAATGTGAAGAGAGGGGCATTCTCTTCATGCCGATTCCGAACAGATACCGAGAAGCAAAACAAGTTTACAAAGTTGGAAATATGCAAGCATACATGGACGGAAATGCTATCCTCGTTTGTCACGGTGCTAACAATTGGGTTCCGACCAATTTGAACGCCCTTTTAGATATGTGTGAGAGCTAA
- Protein Sequence
- MSEDEIESFEITDYDLENEFNPYRSRRKLSKKQQMLGMWADDSEEEEETKGKPSFKTFNKGPKNYTAPVNFVSGGIQQAGQPKEEKPQDEDDEEEESGRPRRGDKDYVPNSSSDSEAEGPSNVRKRKTFSLHTDGDIAGLRRKKTPFNPALTKIGLGNWEVHTKGIGAKLLLKMGFEPGKGLGKNLQGMDAPVEAQLRKGRGAIGAYGPEKFAKIAEKKKEEVSEESKEQKRKTSQWRKNDAGGKRKVKYCYRSVDQVIEDGKLKPNRTAGMSSDMSRVKVIDMTGPEQRVLSGYHAIRSGQQRPNESLLTSDKKSTANFALPELQHNLNLLVDICEQNIIQNDRRNRYLGDRLIALEAEKTNLAKVLEQEAHSIDIMENVLHIVEQLTEKSSELTLKDAAEAFKNLQENYYEMYQTYELGELASSLVGPKVKEYLLTWNPLMQPKQPLELFKQWKDILESGKTTLQTGSLHPYDQLVWNAWMPSIRGAIQEWRCREPDPLINLIETWLPLLPSWILDNIFDLIVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPHLRNRLNTQIYPIIRRKLGSALGGWHASDRSARLMLEPWSQVFSKGDLEAFLVKNIVPKLQIALDELVINPHQQHLDLWHCVYEWKELLPVHIMSGLLDKFFFPKWLHTLALWLNNSPNYDQVTDWFLGWKGLLNEKLLAEPVIKENFRKAVIMMNNAVSVSEGLQPGAVEQVSYLTSLERSQPPISQIPSNVQPRIESIAEAMRNRVNQIPHGFKELVQNKCEERGILFMPIPNRYREAKQVYKVGNMQAYMDGNAILVCHGANNWVPTNLNALLDMCES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01390211;
- 90% Identity
- -
- 80% Identity
- -