Scon012509.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- retn
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010000045.1:6129876-6135000[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-20 5.9e-17 62.5 0.0 13 89 4 78 1 78 0.94
Sequence Information
- Coding Sequence
- ATGGTAATTATGTCTGTTTCAGGAACGCCGATTAATAGATTACCCATCATGGCCAAGTCAGTTCTAGACCTTTATGAACTCTACAATTTGGTTATAGCCCGAGGAGGTCTAGTAGACGTCATCAACAAGAAATTGTGGCAGGAAATTATCAAAGGTCTTCATTTGCCTTCGAGTATTACTTCCGCTGCCTTCACATTGCGAACCCAGTATATGAAGTACCTGTATCCATACGAGTGTGACAGGAGGCACTTATCTACGCCAACAGAGCTTCAAGCAGCTATTGATGGCAATCGTAGAGAAGGCAGAAGAAGTAGTTATGGAACATATGGAGGCGCAGGTGAGACTTTGGTCCAGAGGAATCCTCACACACCAAGTTCATTGGCCCTCCATCCACAAATGTCACCGTTGTCACTTGTCACCGCGGTGGCAGGTGGTCAACATCACGGGCCACAGTCTTTGGTTAACGGAAGCGGTGCACACACTCCCCTATCACATCATCCTCATCATCCTCAGGGAGCCATGGGACAACCTGCTGTACCGGGGATGGCACCAGAGTTTCAAGAACGAATGGTAGAGTACATAAAACTCTTGAATAAGGAACTGAAGAACTCTGGGACCGCGGAGCAGATGATGATGCTTAGACAGGCGGGTACATCTCCTCCAAGATCCTCATCCCCCCGAGAAAGTAGCGGTTTTAATGTTATTGATATGGGTCGATTACAAATGTGGAACATGTTCAATAATAACACTCTTTACCCAGGAGTTGGTGGTCATCATCAACCATTTTCTCCACAGCCACCTCATTCCCCCGTTCCAGCAGATGCGAGTCCTGAACCACAAAGAGAAGCTCTGGATCTTGGTCTCAGGTCACCACCGTCTTCATCCCCTCCAAGACAGAGTCCTCTTTCATCTGGTGGAAGtattcaagtaaaaaatgagCAAGATTTAGTTGGAAAATCTGCACCCTCTACCATTAAAAGGCTTAGGTTAGAAGATGAAACTCCCGTAGACAAAGATATGATATTATCTAACCCACGCACCAACATAACGATCTCTAACCGGGgTGACGGACGTAATGGAGATAATTCTCTAGTGGTTAGTATAGAATTGAATGGAGTTATGTACCAAGGTGTTCTGTTTGCGCAAACTGCAAGTAGAAATATGCCACCCGCGTCCACCAACAGTACGAAGGCACCGCGAAGTCTCGTCTCGTGA
- Protein Sequence
- MVIMSVSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDRRHLSTPTELQAAIDGNRREGRRSSYGTYGGAGETLVQRNPHTPSSLALHPQMSPLSLVTAVAGGQHHGPQSLVNGSGAHTPLSHHPHHPQGAMGQPAVPGMAPEFQERMVEYIKLLNKELKNSGTAEQMMMLRQAGTSPPRSSSPRESSGFNVIDMGRLQMWNMFNNNTLYPGVGGHHQPFSPQPPHSPVPADASPEPQREALDLGLRSPPSSSPPRQSPLSSGGSIQVKNEQDLVGKSAPSTIKRLRLEDETPVDKDMILSNPRTNITISNRGDGRNGDNSLVVSIELNGVMYQGVLFAQTASRNMPPASTNSTKAPRSLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979873;
- 90% Identity
- iTF_01393283; iTF_01390872; iTF_00979873; iTF_00089326;
- 80% Identity
- -