Most024763.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- retn
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010000078.1:27299156-27303741[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-20 1.8e-16 62.5 0.0 13 89 4 78 1 78 0.94
Sequence Information
- Coding Sequence
- ATGGGAATAATGTCTGTTTCAGGAACGCCGATCAATAGATTACCCATCATGGCCAAGTCAGTTCTAGACCTTTACGAACTCTACAATTTGGTCATTGCCCGAGGTGGTTTGGTAGATGTCATTAACAAGAAACTCTGGCAGGAAATTATCAAAGGTCTTCATTTACCGTCAAGCATTACTTCTGCCGCCTTCACACTCCGCACCCAATACATGAAGTACCTTTATCCGTATGAGTGCGACAGAAGGCATTTGTCAACCCCAGCGGAACTGCAAGCGGCTATCGATGGTAATCGGAGGGAAGGACGAAGGAGCAGCTATGGAGCATACGGTGGTGCAGGTGAGACCCTGGTCCAGAGGAATCCTCACACACCAAGTTCATTGGGCATCCATCCCCAAATGTCACCGTTGTCACTTGTCACCGCGGTGGCAGGTGGTCAACATCACGGGCCACAGTCTTTGGTTAACGGAAGCGCTGCACACACACCCCTATCACATCATCCTCATCATCCTCAGCATCCACAGGGAACTATGGGACAACCTGCCGTGCCTGGAATGGCTCCAGAGTTTCAAGAACGGATGGTGGAGTACATTAAACTCTTGAATAAGGAACTGAAGAACTCTGGGACCGCGGAGCAGATGATGATGCTCAGACAAGGTAGTGCATCCCCTCCAAGATCAACATCTCCTCGAGAGAGTGGCTTCAATGTTCTTGATATGAGTAAATTACATATGTGGAATATGTTCAACAATAATACTCTTTACCCAGGAGTCGGCGGTCATCATCAGCCATTTTCGCCACAGCCAGCGCATTCCCCTGTTCCACCAGAAGCGAGTCCTGAACCACAGAGAGAAGCACTGGATCTCGGTCTCAGATCACCGCCAACGTCTTCTTCCCCTCCAAGACAGAGTCCTCTTTCGTCTGGTGGTAGTATTCAAGTAAAGAATGAGCAGGATTTAGTCGGCAGATCTGCACCCGCAGCCATTAAAAGGCTCAGGTTAGAAGATGAAACTCCTGAAGAGAGAGATATATTATCCAATCCACGCACCAATATAACCATCTCCAACCGAGgtGACGGACGTAATGGAGATAATTCTCTTGTGGTTAGTATAGAGTTGAATGGAGTCATGTACCAAGGTGTTCTGTTTGCGCAAACTGCAAGTAGAAACATGACGCCCGCGTCCACCAATAGTACGAAGGAACCGCGAAGTCTCGTCTTGTGA
- Protein Sequence
- MGIMSVSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDRRHLSTPAELQAAIDGNRREGRRSSYGAYGGAGETLVQRNPHTPSSLGIHPQMSPLSLVTAVAGGQHHGPQSLVNGSAAHTPLSHHPHHPQHPQGTMGQPAVPGMAPEFQERMVEYIKLLNKELKNSGTAEQMMMLRQGSASPPRSTSPRESGFNVLDMSKLHMWNMFNNNTLYPGVGGHHQPFSPQPAHSPVPPEASPEPQREALDLGLRSPPTSSSPPRQSPLSSGGSIQVKNEQDLVGRSAPAAIKRLRLEDETPEERDILSNPRTNITISNRGDGRNGDNSLVVSIELNGVMYQGVLFAQTASRNMTPASTNSTKEPRSLVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089326; iTF_00676483; iTF_00880239; iTF_00882739; iTF_00460277; iTF_01394070; iTF_01391744; iTF_01389210; iTF_01393283; iTF_01390872;
- 90% Identity
- iTF_01389210;
- 80% Identity
- -