Scon025243.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- dl
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010030604.1:3142-4734[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-57 6e-54 183.2 0.0 1 169 16 185 16 185 0.99 2 2 3.9 1.6e+04 -3.7 0.2 110 136 316 341 298 354 0.57
Sequence Information
- Coding Sequence
- ATGATGTCTGCAGATACAAATCTGCAGCCTCAGATTTTACCTTACGTTGAGGTGGTGGAACAGCCGTCCCAAAACATGCATCGCTTTCGTTATCAGTGCGAAACGCGATCTGTGGGATGCATCGTCGGCGTAAACAGTTCCCCCGAAAGGAAAACGTATCCGTCAATCAGAGTACAGGGATATGAGGGTCCgtctgtaattattatatccTGTGTGACAAAAGATGACATTCCAAAGGCACATCCACACGGCCTTGCAGGAATAGCGTCTTGTAAAAATGGCGTATGTTCTCTGAAAGTAAATCTTGATGGTGGTGTAGTTTCCTTCAGCAATCTAGGGATTCAGTGCGTCAAGAAGAAACAAGTGAGAGAGGCCTTGAAAATTAAGAAGGAAAACTGGATCGATCCCTTTAACGCCGGGTTCGAACACATGAACTTTCCAGACTCGATTGACCTTAATGCCGTGAGACTGGCCTTTCAAGTTTTCATCCCGGGCCCTGACAGGAGGTTCCGCGTGCCCCTCAGGACCGTTGCAACCGTTCCCATTTACGACAAGAAATCCTTTCCAGAACTCGTCCTTTATACAATAAGCCACAACAAGGCGCCGGTTTCCGGTGGTATGGAAATCATACTTCTCTGCGACAAAGTCTCGAAGTACGATATTCAAGTCAGGTTCTTGGAGGTGCGAGACAATTTGCTCTTCTGGGATGCTTGCggggaatttaaaagagacgACGTGCACAAGCAAGTGGCCATTGTCTTCAAAACGCCCAGATATTGCAACCAGGACATTTCTGAGCCGGTGAATGTACATGTGCAGCTGAGAAGGAAGTCTGATGGTGCCACAAGCAACACTTTGCCCTTTCAGATGATGCCACTCAACCTTAATGATGTGAATTCACATAACATTAAGAACATTGATAAGATTGATAAGATTGATTCGCTCAAGAGGAAAAGAATGGAATTCAGTGACTCGAATTTATCAAAAGAAGATTTGAAGGTGCAGGAGCAAGACACCGACTTGATGGAGCCGAATAGAGTCCAAGACGTCGTTTTACCTCAGCCTCACGCCCAACCTAGATCACAACCCAAGTCACAACCTAGAGAACAACCAAGGCCACAACCTGAACCACAACCTAGACCACAACCTCAGCCTCGTCGTATTGAAATTCCAGCCCCTAATGTAACAATGAATTATTCTGCCTATCGGGAACCAATATTTACCAATTATCGCCAGGAAGAACCAAAACAAACCGAGATACATTTTCCCAAACAACAAACACAACTGGAGGATAATCTGGATGAAGCAATTGACTTCGATTGCGACATCGATAAAGTAAATTCTCAGGATTTGGCTTTCCTCGACAGCATTGATTTAGAGATTTTCGAGACTCTCTCCGAGAATCTTTCGAAGGGACTTTCGATTTCGGATCAAAACGAGGAGACACATCAGAGTATTCTTGAGCTGAATAAGGATCTTCAATTTGGGAACAATGAGAGAGACTTTAATGATTCTTGGTCCTGCAATGGCTTTCCGAGACCAACTTTTGGTACTCGACTTGGTACATATAGAAACTTGCAATTTCTTACctaa
- Protein Sequence
- MMSADTNLQPQILPYVEVVEQPSQNMHRFRYQCETRSVGCIVGVNSSPERKTYPSIRVQGYEGPSVIIISCVTKDDIPKAHPHGLAGIASCKNGVCSLKVNLDGGVVSFSNLGIQCVKKKQVREALKIKKENWIDPFNAGFEHMNFPDSIDLNAVRLAFQVFIPGPDRRFRVPLRTVATVPIYDKKSFPELVLYTISHNKAPVSGGMEIILLCDKVSKYDIQVRFLEVRDNLLFWDACGEFKRDDVHKQVAIVFKTPRYCNQDISEPVNVHVQLRRKSDGATSNTLPFQMMPLNLNDVNSHNIKNIDKIDKIDSLKRKRMEFSDSNLSKEDLKVQEQDTDLMEPNRVQDVVLPQPHAQPRSQPKSQPREQPRPQPEPQPRPQPQPRRIEIPAPNVTMNYSAYREPIFTNYRQEEPKQTEIHFPKQQTQLEDNLDEAIDFDCDIDKVNSQDLAFLDSIDLEIFETLSENLSKGLSISDQNEETHQSILELNKDLQFGNNERDFNDSWSCNGFPRPTFGTRLGTYRNLQFLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -