Scon025511.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- dl
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010030865.1:3163-5178[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-60 2.1e-56 191.1 0.1 1 169 26 196 26 196 0.99 2 2 0.3 1.2e+03 -0.0 0.1 115 155 616 656 594 662 0.67
Sequence Information
- Coding Sequence
- ATGCATCAAGTGAGTTCTGCAAGTGCATATGAGTATCCACAATCACAGATATCGACAACCAATAATTTACCCTATGTTGAGGTAGTGGAACAACCCTCTCCAAACACGCTTCGCTTTCGTTATGCGTGTGAAAAGAGATCTGCGGGATGTATAATTGGTGTTAATAGTACACCCGAGAAAAAAACGTTCCCATCAATTAGAGTGCATGGCTATCAAGGTAAAGCTGTAGTTGTGATATCCTGTGTGACAAAAGACAATCCTCCTAAGCCACATCCTCACAGTGTTATAGGAAAAGATTCATGTGAAAATGGCGTATGTACCATGAAATTCAATCTCTCTGCTGGTGGTATTATTTCCTTCGGCAATCTTGGGATTCAAtgtgtaaagaaaaaagaagtgaGAGACGCTTTGGCGATTAGGAAGCGAGAACGGGTCGACCCTTTTTCAACGGGGTACGAACACATGAACTTTCCGGATTCAATCGATCTCAATGTAGTAAGACTctcttttcaagttttcatcCAGGGATCTGATAAGAAATATACCGTGCCACTCAAGTCTGTAGCAACATGCCTCATCTATGACAAGAAGGCCATTGAAGTACCTGTCATTGTGAAATTGAGTCATCACAGTGCTCCAGTTTCTGGCGGAACAAATATGATACTTCTCTGTGGAAAAGTCTGCAAGGACGATATTCAGGTGAGGTTCTTTGAGATGCGAGACAACTGGCCCTTCTGGGATGGTTATGGAGAATTTCGCCCATCTGAGATACACAAACAAGTAGCTATTTCCTTCAGAACACCGAGATACTGCAACCAGGATATTTCAGAACCAGTCACTGTGTATATTCagctgagaaaaaaatctgatgGCACAACAAGCAAGCCTGTTCCCTTTCAGATGCTGCCACTGGACCTTGACGAtaagaattctttgaaaagaaaaaggataaaattaaattacgacCCTAAAACATATATGGCGAAACAAATACAGGCTCAGGCTCAGAAGCAAGGTAATATCTTGAATCATGCTTTGTTGCTGAATTCTAGAGATGTTATTAAGCATCAACCGTGTCGCGAAATGCCTGTGCTCTTTAGAGGAGAAGAAGTACACCCAAGACCGACACCAATTTTTCAAGAGCAGGCCTCAGCACTTCCGGTACCGCAGGCCACACATCAAGAGAGGATTCATTATAATATTCCCTTTAATCAGCAACATAATTATGAAAGAGAAGGTCGTTCTCACCTCTGCAATGAGGTTCCCGTTACAGAGCCACAATTTTTAACTTCGTCATTTTTACCACAAGCTCAAGGAAGGATGGATATTCCCTTTAGCCAGCAACAACATAGTTTGGAAAGAGAAGGTTGTTTACAGCCTAACTATCAGATCCCCGTTCCTCAGCCAAGAGTTCTAACTTGTCCTCCACCTGCTCAACCTCTTCAGCCTCGTCAACCTAAACCTCGACCTCAACCTCGTCGTCGCACCGAGCCTCCACCTCCTAATGtaacaataaattcttttgtctATCTAGAATCACCGTTTTCTAACTATCATCAGCCCGAACCACAAGCTACGCCGCAATATTCTTCCAATCAACAACAAATGGTGACGGATCAATTGCATGACGGTAATAATGATGATCCATTTATGTTGCAAGACCTTCCGTATGATCTCGATCAGCTGAGTCAACAGGATTTGCAACTGGATCTTTTGGAAACAACAGATCCAGATAATGTCGAGGATAATGTCTCCGAAACTCTCTCAGAGACTCTTTCTAAAGGACTTTCGATTTCGGTGGATGATATCGAGAACACATTTCAGAATATTCATGAACTGAATAAGGAAATTCCAGAGAGTCAACGTCAAGGTCAAGTACAGTTTgcggaaaatattgaaaggaGGGATTTAAGTGCAGTTGGACCATCCTTTAATGCTTTTGCGAGACACAATTTTGACAATCACATGGACCAGGCGCAGGAAAAACGTTCTGGCTTAGACTTCATGAGGTCATAA
- Protein Sequence
- MHQVSSASAYEYPQSQISTTNNLPYVEVVEQPSPNTLRFRYACEKRSAGCIIGVNSTPEKKTFPSIRVHGYQGKAVVVISCVTKDNPPKPHPHSVIGKDSCENGVCTMKFNLSAGGIISFGNLGIQCVKKKEVRDALAIRKRERVDPFSTGYEHMNFPDSIDLNVVRLSFQVFIQGSDKKYTVPLKSVATCLIYDKKAIEVPVIVKLSHHSAPVSGGTNMILLCGKVCKDDIQVRFFEMRDNWPFWDGYGEFRPSEIHKQVAISFRTPRYCNQDISEPVTVYIQLRKKSDGTTSKPVPFQMLPLDLDDKNSLKRKRIKLNYDPKTYMAKQIQAQAQKQGNILNHALLLNSRDVIKHQPCREMPVLFRGEEVHPRPTPIFQEQASALPVPQATHQERIHYNIPFNQQHNYEREGRSHLCNEVPVTEPQFLTSSFLPQAQGRMDIPFSQQQHSLEREGCLQPNYQIPVPQPRVLTCPPPAQPLQPRQPKPRPQPRRRTEPPPPNVTINSFVYLESPFSNYHQPEPQATPQYSSNQQQMVTDQLHDGNNDDPFMLQDLPYDLDQLSQQDLQLDLLETTDPDNVEDNVSETLSETLSKGLSISVDDIENTFQNIHELNKEIPESQRQGQVQFAENIERRDLSAVGPSFNAFARHNFDNHMDQAQEKRSGLDFMRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -