Basic Information

Insect: Synanthedon tipuliformis
Gene Symbol: -
Assembly: GCA_947623395.1
Location: OX392435.1:147788-153590[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.003 1.5 9.1 1.7 18 40 416 435 410 437 0.77

2 28 0.14 72 3.8 1.5 2 38 455 488 454 494 0.85

3 28 0.015 7.4 6.9 0.8 2 29 504 532 503 546 0.86

4 28 4 2e+03 -0.8 0.3 18 26 549 557 544 566 0.79

5 28 0.82 4.1e+02 1.4 4.9 6 41 620 655 618 658 0.73

6 28 0.0055 2.8 8.3 0.9 15 43 663 688 657 689 0.85

7 28 0.0017 0.85 10.0 1.3 16 43 692 716 690 717 0.87

8 28 0.12 60 4.0 2.4 15 43 722 747 716 748 0.82

9 28 0.0058 2.9 8.2 0.7 16 43 751 775 749 776 0.87

10 28 0.12 63 4.0 1.4 15 32 781 799 775 806 0.74

11 28 6.2 3.1e+03 -1.5 0.2 20 34 814 825 814 835 0.73

12 28 0.00044 0.22 11.8 1.4 15 43 840 865 833 866 0.89

13 28 5.7 2.9e+03 -1.3 0.0 19 43 875 896 870 897 0.79

14 28 0.019 9.3 6.6 0.3 18 43 905 927 898 928 0.88

15 28 0.00046 0.23 11.8 0.3 17 43 935 958 929 959 0.87

16 28 0.0021 1 9.7 0.4 16 43 962 986 960 987 0.85

17 28 0.14 71 3.8 0.3 21 43 998 1017 997 1018 0.92

18 28 0.0045 2.3 8.6 1.6 17 43 1025 1048 1017 1049 0.86

19 28 0.0019 0.97 9.8 0.1 18 43 1057 1079 1051 1080 0.88

20 28 0.0019 0.97 9.8 0.1 18 43 1088 1110 1082 1111 0.88

21 28 0.00064 0.32 11.3 0.2 17 43 1118 1141 1112 1142 0.86

22 28 0.0021 1 9.7 0.4 16 43 1145 1169 1143 1170 0.85

23 28 0.00081 0.41 11.0 0.3 17 43 1177 1200 1172 1201 0.86

24 28 0.0013 0.64 10.3 1.6 16 43 1204 1228 1202 1229 0.86

25 28 0.049 25 5.3 0.2 21 43 1240 1259 1239 1260 0.92

26 28 0.00092 0.46 10.8 0.6 18 43 1268 1290 1262 1291 0.88

27 28 0.2 1e+02 3.3 7.8 16 43 1294 1318 1290 1319 0.82

28 28 0.18 93 3.4 0.0 18 36 1327 1342 1321 1349 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.003	1.5	9.1	1.7	18	40	416	435	410	437	0.77
2	28	0.14	72	3.8	1.5	2	38	455	488	454	494	0.85
3	28	0.015	7.4	6.9	0.8	2	29	504	532	503	546	0.86
4	28	4	2e+03	-0.8	0.3	18	26	549	557	544	566	0.79
5	28	0.82	4.1e+02	1.4	4.9	6	41	620	655	618	658	0.73
6	28	0.0055	2.8	8.3	0.9	15	43	663	688	657	689	0.85
7	28	0.0017	0.85	10.0	1.3	16	43	692	716	690	717	0.87
8	28	0.12	60	4.0	2.4	15	43	722	747	716	748	0.82
9	28	0.0058	2.9	8.2	0.7	16	43	751	775	749	776	0.87
10	28	0.12	63	4.0	1.4	15	32	781	799	775	806	0.74
11	28	6.2	3.1e+03	-1.5	0.2	20	34	814	825	814	835	0.73
12	28	0.00044	0.22	11.8	1.4	15	43	840	865	833	866	0.89
13	28	5.7	2.9e+03	-1.3	0.0	19	43	875	896	870	897	0.79
14	28	0.019	9.3	6.6	0.3	18	43	905	927	898	928	0.88
15	28	0.00046	0.23	11.8	0.3	17	43	935	958	929	959	0.87
16	28	0.0021	1	9.7	0.4	16	43	962	986	960	987	0.85
17	28	0.14	71	3.8	0.3	21	43	998	1017	997	1018	0.92
18	28	0.0045	2.3	8.6	1.6	17	43	1025	1048	1017	1049	0.86
19	28	0.0019	0.97	9.8	0.1	18	43	1057	1079	1051	1080	0.88
20	28	0.0019	0.97	9.8	0.1	18	43	1088	1110	1082	1111	0.88
21	28	0.00064	0.32	11.3	0.2	17	43	1118	1141	1112	1142	0.86
22	28	0.0021	1	9.7	0.4	16	43	1145	1169	1143	1170	0.85
23	28	0.00081	0.41	11.0	0.3	17	43	1177	1200	1172	1201	0.86
24	28	0.0013	0.64	10.3	1.6	16	43	1204	1228	1202	1229	0.86
25	28	0.049	25	5.3	0.2	21	43	1240	1259	1239	1260	0.92
26	28	0.00092	0.46	10.8	0.6	18	43	1268	1290	1262	1291	0.88
27	28	0.2	1e+02	3.3	7.8	16	43	1294	1318	1290	1319	0.82
28	28	0.18	93	3.4	0.0	18	36	1327	1342	1321	1349	0.73

Sequence Information

Coding Sequence: ATGGCTGAAACATTAAACCCAACACCTTTTTGTAGATGTTGTCACAAGAATGGCGATTTCAAGTGTTTATTTTCCGACTTCATTAACGAGAATGAGATTGAAAATTATTCGCAGATGTTGTACGATACATTTGGAATCTTATTTGTACCCTCCATAGATGACAAAATCTATACAATATGCGATGAGTGTATTGAAAAACTACGTATCTCAACGGAGTTCAAGAATTGTGTCCTCGCCTGTAAAAAAAATGCTTGTTGGCGAGGGCACTGTCGTGCTCGACTTGACGGAGGCACTGCAGAGACCCCAGATATGAAACAAGAGACCTCCGAAGATGAAGACAGTGACATGGATATAATAAATGAGGGTTCAGACGAAGATTGCAATCAGGAGGTCGAAGTTGAAGACAGCGGAAACAAATCTGATGAAACCTGGAGTGAATCTGAAACGTACTTCATAGAAGAAGCGTTATTAGCAGACGACATCAAAGTTGAAACAGAAGAGATGGTCAACAATGAAGACTCTGGAATAAATAAGGTTGAAGATATCACAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATATCACAAATGAAGACTCAAGTATAAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCGGAAATGAAGACTCAAGTATGAATAAGGTTTTAGATGAAGATTCCAATGAAGATGTCAGAAACGAAGACTCAAGTATAAATAAGGTTTCAGATGAAGAGTTCAATGAAGAGTGTGAAATGAAATCAGATGAAACCTTTAATGATGCTGGTGTCAGTTTGAGAAAAGCAAGCGACATACATGAGTATAAATGCAACATTTGCAATAAAACTTTCAAACGCAAGGTGACCCTAGAAAATCACATCAGAACTCACGATGGCTCTAAACGCCAAACACGTGCAGCAATATTGTTGAATAAGAGAGAGAACGCGAAACACCATCAGTTGAAGGTTCACATGGACAGACAGACACGTGAGTGCCAAGAGTGCGGCCGGAGATTCACAGAAAAGTCAAGCTTACTCAGGCATTATCAAAACATACACGTGGGTGGAAAAAAATTCACAGAAAAGAGAAAATTACTACGGCATTGTCGAGAGGTGCAAAATATGGATGTAAAAAAGTACAGTTGCCGGTTTTGCGATAAAAGACTTGCGACTAAACAGGCATTGGTTCTACATGAAAGGACACACACGGGAGTAAAATTGTATGTGTGCAAAATATGCGATAAACCGTTTCATAGTATAAGGGGTTTACTGGATCATAATGCAGTGCATTTGGAATATAATTATAAGCCTTTCACTTGTAACGTGTGTGATAAAGCATTCAAAAAGAAAAATACTTTAAACAGACACATCTTGACGCATACTAGGATAAAATCTTTTCAATGCAGTGTCTGTAGCAAGAGTTTTGCACGTAAAGATCATTTTAATAATCACATAAAGGTCCATACGAGCGAAAGTCCTTACAAATGCGGCACTTGCAAGAAGACATTTAAACACAAAAAGAGTTTAAGCGAGCACATGTCGGTTGTACATTTGGGCTTTAAACCAACGCTCTTTGAATGTGACATTTGTAAAAAGACATTTAAATACAAAAGTGATTTAAGGAAGCACATGTCGGTTGTACATTTGGGCTTTAAGCTTGACTGCAACATTTGCAAAAAGACATTTAAATACAAAAGTGATTTAAGGAAGCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCTCTTTGAATGTGACATTTGCAAAAAGACATTTAAACACAAAAAGAGTTTAAGCGAGCACATGTCGGCTGTACATTTGGGCTTTAAGCTTGACTGCAACATTTGCAAAGAGACATTTAAATACAAAAGTGATTTAAGGAAGCACATGTCGGTTGTACATTTGGGCTTTAAACCAACGCTCTTTGAATGTGATATTTGTAAAAAGACATTTAAATCCAAACAGTATTTAACGAAGCACATGTCGGTTTTACATTTGGGCTTTAAGCTTGACTACAACATTTGCAAAAAGACATTTAAACACAAAAAGAGTTTAGGCGAGCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCTCTTTGAGTGTGATATTTGCAAAAAGACATTTAAATACAAAAGGAATTTAAGAGAGCACATGTCGACTGTACATTTGAGCTTTAAACCAACGCCCTTTGAGTGTGATATTTACAAAAAGACATTTAAATACAAAAGGAATTTAAGCGAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCTCTGAGTGTGACATTTGTAAAAAGACATTTAAACACAAAAACAGTTTAAGGAAGCACATGTCGGCTGTACATTTCGGCTTTAAGCTAACCCCCTTTGAGTGTGATATTTGCAAAAAGACATTTAAATATAAACATAATTTAAGCAAGCACTTGTTGGCTGTACATTTGGGCTTTAAGTTTGACTGCAATATTTGCAAGAAGACATTCAAATACAAAGACAGTTTAAGGAAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCTCTTTGAGTATGATATTTGCAAAAAGGCATTTAAATATAAAAAGAATTTAAGCGAGCACATGTCGGCTGTACATTTGAGCTTTAAGCCAACGCCCTTTGAGTGTGATATTTGCAAAAAAACATTTAAATACAAAAGGAATTTAAGCGAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCTTTGAGTGTGATATTTGCAAAAAGACATTTAAATACAAAAGGAATTTAAGCGAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCTTTGAGTGTGATATTTGCAAAAAGACATTTAAATACAAAAGGAATTTAAGCGAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCTCTTTGAGTGTGACATTTGTAAAAAGACATTTAAATATAAACATAATTTAAGCGAGCACTTGTTGGCTGTACATTTGGGCTTTAAGTTTGACTGCAATATTTGCAAGAAGACATTCAAATACAAAGACAGTTTAAGGAAGCACATGTCGGCTGTACATTTGGGCTTTAAGCTAACCCCCTTTGAGTGTGATATTTGCAAAAAGACATTTAAATATAAACATAATTTAAGCGAGCACTTGTTGGCTGTACATTTGGGCTTTAAGTTTGACTGCAATATTTGCAAGAAGACATTCAAATACAAACACAGTTTAAGGAAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCTTTGAGTATGATATTTGCAAAAAAACATTTAAATATAAAAAGAATTTAAGCGAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCTTTGAGTGTGATATTTGCAAAAAGACATTTAAATATAAAAAGAATTTAAGCGAGCACATGTTGGCTGTACATTCGGGCTTTAAGTGTGACTGCAACATTTGCATGAAGACATTTAAATACAAAAGGAGTTTATGCAGGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCCTTGAGTGTGACATTTGCAAAAAGACATTTAAATCCGAACAGTATTTAACTGAGCACATGTCGGCTGTACATTTGGGCTTTAAAGGATTCACATAA
Protein Sequence: MAETLNPTPFCRCCHKNGDFKCLFSDFINENEIENYSQMLYDTFGILFVPSIDDKIYTICDECIEKLRISTEFKNCVLACKKNACWRGHCRARLDGGTAETPDMKQETSEDEDSDMDIINEGSDEDCNQEVEVEDSGNKSDETWSESETYFIEEALLADDIKVETEEMVNNEDSGINKVEDITNEDSSMNKVLDEDSNEDVRNEDSSMNKVLDEDSNEDVRNEDSSMNKVLDEDSNEDVRNEDSSMNKVLDEDSNEDVRNEDSSMNKVLDEDSNEDVRNEDSSMNKVLDEDSNEDVRNEDSSMNKVLDEDSNEDITNEDSSINKVLDEDSNEDVRNEDSSMNKVLDEDSNEDVGNEDSSMNKVLDEDSNEDVRNEDSSINKVSDEEFNEECEMKSDETFNDAGVSLRKASDIHEYKCNICNKTFKRKVTLENHIRTHDGSKRQTRAAILLNKRENAKHHQLKVHMDRQTRECQECGRRFTEKSSLLRHYQNIHVGGKKFTEKRKLLRHCREVQNMDVKKYSCRFCDKRLATKQALVLHERTHTGVKLYVCKICDKPFHSIRGLLDHNAVHLEYNYKPFTCNVCDKAFKKKNTLNRHILTHTRIKSFQCSVCSKSFARKDHFNNHIKVHTSESPYKCGTCKKTFKHKKSLSEHMSVVHLGFKPTLFECDICKKTFKYKSDLRKHMSVVHLGFKLDCNICKKTFKYKSDLRKHMSVVHLGFKPTLFECDICKKTFKHKKSLSEHMSAVHLGFKLDCNICKETFKYKSDLRKHMSVVHLGFKPTLFECDICKKTFKSKQYLTKHMSVLHLGFKLDYNICKKTFKHKKSLGEHMSVVHLGFKPTLFECDICKKTFKYKRNLREHMSTVHLSFKPTPFECDIYKKTFKYKRNLSEHMSAVHLGFKPTPSECDICKKTFKHKNSLRKHMSAVHFGFKLTPFECDICKKTFKYKHNLSKHLLAVHLGFKFDCNICKKTFKYKDSLRKHMSAVHLGFKPTLFEYDICKKAFKYKKNLSEHMSAVHLSFKPTPFECDICKKTFKYKRNLSEHMSAVHLGFKPTPFECDICKKTFKYKRNLSEHMSAVHLGFKPTPFECDICKKTFKYKRNLSEHMSAVHLGFKPTLFECDICKKTFKYKHNLSEHLLAVHLGFKFDCNICKKTFKYKDSLRKHMSAVHLGFKLTPFECDICKKTFKYKHNLSEHLLAVHLGFKFDCNICKKTFKYKHSLRKHMSAVHLGFKPTPFEYDICKKTFKYKKNLSEHMSAVHLGFKPTPFECDICKKTFKYKKNLSEHMLAVHSGFKCDCNICMKTFKYKRSLCRHMSAVHLGFKPTPLECDICKKTFKSEQYLTEHMSAVHLGFKGFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01388721; iTF_01389084;
90% Identity: iTF_01388721; iTF_01389084;
80% Identity: iTF_01388721; iTF_01389084;