Stip017407.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synanthedon tipuliformis
Gene Symbol
Hr39
Assembly
GCA_947623395.1
Location
OX392411.1:2312404-2322602[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.11 7.7e+02 -0.5 3.6 83 172 227 315 121 360 0.55
2 3 7.5e-08 0.00054 19.7 0.1 1 21 440 460 440 481 0.88
3 3 9.4e-66 6.8e-62 210.5 0.0 157 408 498 758 464 758 0.84

Sequence Information

Coding Sequence
ATGGCCAGCGACGGGGACGCTGTTAAAATTGAAGGTGCCCACGTGTCCGTCACCACCATCGGGATGTCGGGCCCAGAGACAAGCAACGGTCAATTTTCCTACAGCTCGAGTGGGGTCCGTATCAGTGTTTCCTCAGATCCCCACGACGAGGATTCAAACGACGCTGAGATCTCCAAAATTGATTTTTCTCAACATCAGTTCGAGGTAAACATGCGAAATAAAAAGAAAAGATCTTCCATTGGAGCACAATGTGAAAATCAAAATGACCGCGAAAGACCAATGTCATGGGAGGGAGAATTGTCGGATTCCGAAATGGTTATAGATACAAGTATAAATAACGACGAAAACAGCAGCTCCTTAGACCTGCAATCTTCGAGAGACTCGATCGACACGTTGCGTAATGTGACTATAAAATCGGAGCAAGTGAAGACCGAATCGTTCCAGAGTCTGGACGATCAGAGGGTACTGGATCTCAAGTACACTGCGCCTCTTCAACCTCACCAGCGGAGTCTTAGTATGAACAGAATATCAGTGCTAACTGACAACACTTCTCTAAGTTTGGCACGAAGGCCATCATCGCCACCAAGGAACGCTAAATCACTAGTTCTAGATCAAAACAATGTGCCGATCATTCCGCAAACTGCAGTCGGGGAGATCCAGAATTTAACTATCAAGAAAGAAACACAACTTTCCGAATTGAAATGCGAACCGTCCGTCGGCATGGACAAATTATTAGGAGCCCTTCACGGCTCCCCACTTTTAGGGAGATTACCTCGAGTACAGTCCAGCGCTAGCACTGACTCCGCCGTACATTCCATGTACACGCACAGTGTGTACAGCAGTCCGTCGGCGAGCCCACGCGCGTCTCGTCAGTATACGCCATCTCTTTCTCGCAACAACAGCGACGCCTCGCACTCTTCTTGTTACTCCTACAGCTCCGAATTCTCTCCCACACATTCACCTGTACAGGGCCGACACCCACACGTGGTATACCGCGAGCAGGCCGCAAGTATATTCCCCGCTTCTCCTGCGCATGAAGAGGACGAGGGAACTGACGAGAGGCTCCATCACCATCAAGGGATCAGTAGGCAGCAACTTATCAACAGTCCGTGCCCAATTTGCGGTGACAAGATCAGCGGGTTCCACTACGGAATATTCTCATGTGAGTCCTGCAAGGGCTTCTTCAAGAGGACAGTGCAAAACAGGAAGAACTACATGTGTCTGCGAGGAGGCAACTGCCCAGTCACCGTTGCCACAAGAAAGAAGTGTCCGGCGTGTAGGTTCGACAAATGTCTCGGGTGCGGAATGAAATTGGAAGCAATTCGAGAGGATCGCACTAGAGGCGGTCGCTCCACATACCAGTGCTCGTATTCCCTTTCCGGTGCCGCGTCCACGGGCTCGCTGCTGTCTGCGCACGCGCCTGCAACACTACGGCACGCCTCCAGCCTCACCTGTGTGAACGGTCCAGGTTCATACAACAGCCGAGGGGAGTCGAGTAACAGTCGGCTAACACCCGATATACCACCATTATTGCAGGAAATAATGGACGTGGAACATCTGTGGCAATACAACGAATCGGAGCTGAATCGTCTAGGCAAGTCTACGGGCAGCCCCTCAGCGAACCCCTTACTGGCAGCCAGTGGCATCACAGCGCAGAACTCCAACCCTGACTTCCTGGCGGACCTGTGCAATATAGCGGACCACAGATTGTACAAAATTGTAAAATGGTGCAAGAGTTTGCCGCTATTTAAAAATATTTCTATCGACGACCAGATCTGCCTGCTGATAAACAGCTGGTGCGAGCTGTTAGTGCTATCGTGCTGTTATCGAGGAGTGCTTACGCCGGGAGAAGTTCGCGTCGGCGGAGGCCGAGGCATCACACTCCACCAGAGTGCCAAATTGGGCTTACAACCTTGTATAGAGAGGATGTTGAGTTTCACCGATCACCTGCGAAGATTGCGAGTCGACCGATACGAGTATGTCGCCCTCAAAGTCATCGTACTTCTTACTTCAGATGCGCCGGAGTTGCGCGAAGCGGAGAAAGTGCGCGCGTCGCAGGAGAAAGCGCTCGCGGCGCTGCAGGCGTACACGGCCTCTCACTCTCCAGACACTCCAGCCAAATTCGGAGAGTTGCTGCTGCGTATACCCGAATTGCAAAGGACCTGTCAGTTCTTCATGCAAGTCGGTAAAGAAATGCTCAACCCAGAGAATAAAAATAAAGACGGCGACGGACCCAGCTTCAACCTCCTCATGGAACTCCTAAGAGGGGACCATTGA
Protein Sequence
MASDGDAVKIEGAHVSVTTIGMSGPETSNGQFSYSSSGVRISVSSDPHDEDSNDAEISKIDFSQHQFEVNMRNKKKRSSIGAQCENQNDRERPMSWEGELSDSEMVIDTSINNDENSSSLDLQSSRDSIDTLRNVTIKSEQVKTESFQSLDDQRVLDLKYTAPLQPHQRSLSMNRISVLTDNTSLSLARRPSSPPRNAKSLVLDQNNVPIIPQTAVGEIQNLTIKKETQLSELKCEPSVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRQYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREQAASIFPASPAHEEDEGTDERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPATLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELNRLGKSTGSPSANPLLAASGITAQNSNPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVLTPGEVRVGGGRGITLHQSAKLGLQPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTASHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPENKNKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01386822;
90% Identity
iTF_00806824;
80% Identity
iTF_01388598;