Stip016310.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- ATFC
- Assembly
- GCA_947623395.1
- Location
- OX392419.1:5326259-5330473[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8 6.4e+03 -2.5 0.1 38 48 120 130 117 136 0.44 2 2 1.2e-10 1.1e-07 32.0 8.0 2 63 173 234 172 236 0.95
Sequence Information
- Coding Sequence
- ATGGCAGATCTGTACGTTGAAAACATTTTTTCCAACTGGCTTGAGGAGAAAGTGGAGATTCCAATTTTTGAGAACATACCCCATGTGCCGGAACACGTAGAAGTCGCTCCGGTACCGGTGGCCACTATCGCGCCGCAGCCGACCGAAGAACTGCTGCGCGAGTTCGAGTCCGTCTACGGCGCCGTGGAATTGACTCACCTGACGCCGCCTCAGAGCCCTCCCGGTCCGGCGACCCAGTTGCTCTTGAGCTACGTCCAACAGGCTCAGTGTCCAGCTCTAGTGCCGGCTGTCCCTGTCATCTCCAATGAACAGTGGACCGGCAGTGCGACCGCCGTGCCTCAGTACGACTGCGATCTTCAAGAGGTCGAGGATCTGTTGCGTCACCGCGCCTCTCAATTGACCGACGCCAGTTCGAGCGCGTCGCCGCATTCTTCTCCGTCCTCATCTCCGCGTTCGTCGTCGACCGACGAGGATTGGGGCTCGGTGTCGCGTCCGAAGCCGTACTCGCGTCCAGGAGACGATCGCCGCTCGCGCAAGAAGGAGCAAAACAAAAACGCAGCGACCCGCTACCGCCAAAAGAAGAAGGCGGAGGTTGAGGTTTTGTTGAACGAGGAGAGCGTTCTGAGACAACGCCACACAGATCTCGGCAACAAGTGTAGCGATCTCCAAAGGGAGATACGTTACCTAAAGGGTCTGATGCGCGATCTCTTCAAGGCAAAGGGCCTGATCAAATAA
- Protein Sequence
- MADLYVENIFSNWLEEKVEIPIFENIPHVPEHVEVAPVPVATIAPQPTEELLREFESVYGAVELTHLTPPQSPPGPATQLLLSYVQQAQCPALVPAVPVISNEQWTGSATAVPQYDCDLQEVEDLLRHRASQLTDASSSASPHSSPSSSPRSSSTDEDWGSVSRPKPYSRPGDDRRSRKKEQNKNAATRYRQKKKAEVEVLLNEESVLRQRHTDLGNKCSDLQREIRYLKGLMRDLFKAKGLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01387377;
- 90% Identity
- iTF_01387377;
- 80% Identity
- -