Smyo005979.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- ATFC
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000300.1:73298-74518[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9 7.1e+03 -2.7 0.1 38 47 125 134 122 140 0.42 2 2 1.9e-10 2.3e-07 30.9 9.4 2 63 178 239 177 241 0.95
Sequence Information
- Coding Sequence
- ATGCCCACCCCTGGACTCATGGGACTTTTCAGAGAAAACATATTTTCCAACTGGCTTGAGGAGAAAGTGGATATTCCAATTTTTGAGAACATACCCCAAGTGCCGGAACACGTAGAAGTTACGCCGGTACCGGTGGCCACTATCGCGCCGCAGCCGACCGAAGAACTGCTGCGCGAGTTCGAGTCCGTCTACGGCGCCGTGGAATTGACTCACCTGACACCGCCGCAGAGCCCTCCCGGTCCGGCGACCCAGTTGCTCTTGAGCTACGTCCAACAGGCTCAGTGTCCAGCTATAGTGCCGGCTGTCCCTGTCATTTCTAATGAACAGTGGACCGGTACTGCGACCGCCGTGCCGCAGTACGACTGCGATCTTCAAGAGGTCGAGGATCTGTTGCGTCACCGCGCTTCTCAATTGACCGACGCCAGTTCGAGCGCGTCGCCACATTCTTCTCCGTCCTCATCTCCGCGTTCATCCTCAACCGATGAGGATTGGGGTTTGGTCTCGCGTCCAAAGCCGTACTCGCGCCCAGCAGACGATCGGCGCTCGCGCAAGAAGGAGCAAAACAAAAACGCAGCGACCCGCTACCGCCAAAAGAAGAAGGCAGAGGTTGAAGTTTTGTTGAACGAGGAGAGCGTTCTGAGACAGCGCCACACCGATCTTGGCAACAAGTGTAGCGATCTCCAAAGGGAGATACGCTATCTAAAGGGTCTAATGCGCGATCTCTTCAAGGCGAAGGGCCTGATCAAATAA
- Protein Sequence
- MPTPGLMGLFRENIFSNWLEEKVDIPIFENIPQVPEHVEVTPVPVATIAPQPTEELLREFESVYGAVELTHLTPPQSPPGPATQLLLSYVQQAQCPAIVPAVPVISNEQWTGTATAVPQYDCDLQEVEDLLRHRASQLTDASSSASPHSSPSSSPRSSSTDEDWGLVSRPKPYSRPADDRRSRKKEQNKNAATRYRQKKKAEVEVLLNEESVLRQRHTDLGNKCSDLQREIRYLKGLMRDLFKAKGLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01388223;
- 90% Identity
- iTF_01388223;
- 80% Identity
- -