Basic Information

Insect: Synanthedon myopaeformis
Gene Symbol: Zbtb8b
Assembly: GCA_944738625.1
Location: CALYFO010001397.1:9515-23084[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00025 0.014 16.0 0.5 1 23 272 294 272 294 0.99

2 11 0.04 2.3 9.0 0.9 2 23 302 323 301 323 0.96

3 11 0.17 10 7.0 1.3 1 22 327 348 327 349 0.65

4 11 0.1 6 7.7 2.5 1 23 357 379 357 379 0.98

5 11 7.8e-05 0.0046 17.5 1.2 1 23 385 407 385 407 0.96

6 11 1.3e-05 0.00076 20.0 1.5 1 23 413 436 413 436 0.98

7 11 0.00039 0.023 15.3 0.8 1 21 441 461 441 466 0.93

8 11 0.0018 0.1 13.3 0.5 1 23 474 497 474 497 0.96

9 11 0.012 0.71 10.6 6.6 1 23 503 526 503 526 0.96

10 11 4.9e-06 0.00029 21.3 2.5 2 23 535 556 535 556 0.98

11 11 0.075 4.4 8.2 0.5 6 23 566 584 563 584 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00025	0.014	16.0	0.5	1	23	272	294	272	294	0.99
2	11	0.04	2.3	9.0	0.9	2	23	302	323	301	323	0.96
3	11	0.17	10	7.0	1.3	1	22	327	348	327	349	0.65
4	11	0.1	6	7.7	2.5	1	23	357	379	357	379	0.98
5	11	7.8e-05	0.0046	17.5	1.2	1	23	385	407	385	407	0.96
6	11	1.3e-05	0.00076	20.0	1.5	1	23	413	436	413	436	0.98
7	11	0.00039	0.023	15.3	0.8	1	21	441	461	441	466	0.93
8	11	0.0018	0.1	13.3	0.5	1	23	474	497	474	497	0.96
9	11	0.012	0.71	10.6	6.6	1	23	503	526	503	526	0.96
10	11	4.9e-06	0.00029	21.3	2.5	2	23	535	556	535	556	0.98
11	11	0.075	4.4	8.2	0.5	6	23	566	584	563	584	0.92

Sequence Information

Coding Sequence: ATGTCTTTCTCCGGCAAAAAGTACAAGAAGGTGAAGGTGGAAAACATAACAGAACTCTTGAAAGATTTTAAGTTCGAATCCAAAGTATTGAGTAATCTGAATGATTTCTCTGGTCTGGTATCTTTCACAAAGAACGCTGACGGAACCATCAGGTATATGAGCGTTAGCGGCGATGAAGTTAAATTAGATCAGACCATTGTCTTGAACAAAGAAACGGAGTACACTACTCCTGAGGGTCTTAAAGCCAAAGTGTTCTTCACACTTGACGGCGACATTTTGACCAACAGATTGTCATACTCAGATGGCAGGGTCATCAATTATGTCAGAGATTTTTCAGGCAGTGGATTGAAGATGAAACCACAAACGTTATCGCCCCTCCAGACATTGGCCAACCAAACACTAGAAAAGACTGCGACGAACATTAATTATATAGGACCAATAGAATTAAGCATAGATAATATAAAATACGAAGACAATGCGTATGAAGATGACTTTCATACTGATGAAGATGTACCGCTAGTGTTGTTAACTAGAAATGAAACAGGTGTTGTTAAAAATGAAACAAGTAAGAAGAAAAGAAAAAAATATGGAAACCTACATTTATTGAAAGAAAACACTTTAAATCAAGAAGAACGATTGGACGAAAAAAGGTATAAAAACTCTAAAGGAAAAAGACAGAAGACAGTAAGAGAGGGTTTTAGCTCGAGAATGGTTCAAGAAACAGAAGAATATTTGGTTATCAAATTAACCAAAGAACAGGTTTTGGAAGAGATGAAAGAGAGATCAAAGAGTGAAAAATACAAAAGGTCTCTGTTCAAATGTGATAAATGCGTTAAAGGATTCAACTTTGAAGATGTTCTGAGGGTACATATGGAAACACATTCTAGGGAACGCGGTCCTTTAATGTGCGACATATGCACCCAGTACTGTCCAACTACAGTTTCATTAAGGGGCCATATTAAATCTCATACGACAAGGTATCAGTGTAAAGTATGCGGTGCAGTGCGTTTGTCGCGCCAACATTTGTTAGAGCATCACGCGTCTCACGCCGGCGGCGTCTTGCCTACGTACACTTGTGATTTCTGCACTTTCACCACTAGCAAACGCACCGTGATTCAGCGTCACGTGAGATCGCATGCGATCCGCGAGCGACACGCGTGTGAAATGTGCGGAAAGTTGTTTAAAAATTTGGAATCCTTGAGGGTACATACACTACGTCACGACACCACAAAACACTTCCAGTGCGAACAGTGTAGCCGAAAGTTTATCTATCAATCATTGTTGGATAAACACATGAAATCCGTTCATTTGCATGAAGATTTTTATTGCGTGGAATGCGATGTCAAATTCAAATCGCCGGAAAATCTACGACTACATTTTAGGAACGCAAAGCGTCATCGAGACGCATCTTCGTTCAGGCACCAATGTCCCCAATGCGCGGAGAAATTCGTGACGACTTCGACGCTGGCGGTACACTCGAGCACAGTGCACGGTGCACCCAAACAGCACTGCTGCGACTTGTGCAGGCGACGGTACAGCAGCAGGGAGGCTTTGCGGTCGCACACCAGAAGGTTTCACGGCGCCGATAAAAAGCCGCAAGAGACGTGTCACATATGTCAGAAAACGTTTGCGTACAAAAGCGTGTTGGCGAAACACCTGCGCACGCACACGGGTGAACGGCCCTATACGTGTTTCTGCGGCGCCGCCTTCGCACAACACGCCACGCTCAGAGCTCACCAATTGGCCAAACACAAGgtggctaccgtcgcctatAACATAAACGCTACAAGTTCTGCATCTGCGTTACCGACCATAGTTGGATTGTGGATAAGGAATCAAGGATTGGATAGGGAAATGGGCTCTGGCATCCCTTACTCACTCACCGAAACCAAACAGCACACATACTATTATTTCACAATGGTCTTCAGTATGGGATGGTTACTGCCGCCAGACGGGCTGCCCAAGTGA
Protein Sequence: MSFSGKKYKKVKVENITELLKDFKFESKVLSNLNDFSGLVSFTKNADGTIRYMSVSGDEVKLDQTIVLNKETEYTTPEGLKAKVFFTLDGDILTNRLSYSDGRVINYVRDFSGSGLKMKPQTLSPLQTLANQTLEKTATNINYIGPIELSIDNIKYEDNAYEDDFHTDEDVPLVLLTRNETGVVKNETSKKKRKKYGNLHLLKENTLNQEERLDEKRYKNSKGKRQKTVREGFSSRMVQETEEYLVIKLTKEQVLEEMKERSKSEKYKRSLFKCDKCVKGFNFEDVLRVHMETHSRERGPLMCDICTQYCPTTVSLRGHIKSHTTRYQCKVCGAVRLSRQHLLEHHASHAGGVLPTYTCDFCTFTTSKRTVIQRHVRSHAIRERHACEMCGKLFKNLESLRVHTLRHDTTKHFQCEQCSRKFIYQSLLDKHMKSVHLHEDFYCVECDVKFKSPENLRLHFRNAKRHRDASSFRHQCPQCAEKFVTTSTLAVHSSTVHGAPKQHCCDLCRRRYSSREALRSHTRRFHGADKKPQETCHICQKTFAYKSVLAKHLRTHTGERPYTCFCGAAFAQHATLRAHQLAKHKVATVAYNINATSSASALPTIVGLWIRNQGLDREMGSGIPYSLTETKQHTYYYFTMVFSMGWLLPPDGLPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386132;
90% Identity: iTF_01388826;
80% Identity: -