Smyo008952.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- Dnajc1
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000487.1:12607-19382[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-06 0.0026 18.0 0.0 2 31 300 333 299 341 0.85 2 2 1e-09 1.1e-06 28.9 0.1 2 43 380 426 379 428 0.87
Sequence Information
- Coding Sequence
- ATGTTTTCGAAGGTGCATATGGAACTATTATGTTTTATTTTGTTTATATTAGCGGTTAAAGCTTGGGATGATGGTGATTTAGAAGTATTTGACGTGGTTGAAGAAGTTAATCAGAATTTTTATGAATTACTCGGAGTTGCCCAGGATGCACCAATGTCCGAGGTTAAGTCGGCGTATAAAAAACTAACTTTGAAATTACATCCAGACAAAAATGACTCTCCAGATGCTGATATACAATTTAGGAATTTAGTGTCAGTTTATAATATTCTTAGGGACCCTGGGAAACGAGAAAAATACAATGATGTCCTTAAGAATGGGCTTCCAAATTGGCGTTCTGCTGTGTATTACTACAGACATGTTAGAAAGATGGGCTTAGCAGAGGGTTCCATTATATTATTTATTATTATTACCTTTGGACAATATGCTGTTGGTTGGGCGGCATATGCAGAGAAGAGGTACACTGCAGAACAAATTTTGAATAGCAGAGGAAAGAAGCATTCAAAGAGAACGGGTTTTGATACGGGTCTCGCTGAGATTTTAGAGCAGTTGCCAAAGCCCAGTGTAAAGGACACGCTGCCTTTCCAAATACCCAGGTTTATATGGTGGTTGATAATGGCAATACCACGAAGTGTAATGGAGGTAAAGAGGATAATGAAAGAGAAACGGGAAGAAGAGGAGAGACAGAAGAAAAGGGAGGAAGAAGAGCGGCAGCGGTTAGAGCGAGAGAGTGCCGCTGCGGCGGAGAGGGCGAGCGCGGGGGCTGCGGGGGGAGCGGCGCGGCGGCGGAGGGGGTTCGTGCCTCAGGAGCGGGAGAGGGGGTGTCTGCTTGACGCCCCCGATGAACCGGAGAAACCGGCCGCAGTGCCTCACGCGCCGGCGGCTCCGGTGATCACCGGTGGTCTGTGGACCGACGACGACCTCGCCGAGCTGGTCCGTCTGGTGAAGAAGTATCCAGGTGGCACCGCCGACAGGTGGGAGAGGATAGCTGAGAGCATGTGCCGGAGCGTGCCCGAGGTGACCCACATGGCCGCCAAGTTGAAGGACAACTGCTACAAGATACCGGGACAGGAGACCGCCGAGCCTGTCCCGGAGCCGCCCAAGAAGGTGAAGACTCGCAAGGCGGAGGAAGCGAGCGGAGGCAACTGGTCGCAAACGCAGCAGCGAGCCTTGGAGACGGCTCTAGCGAATCACCCCAAGGGTGGGACCGGAGACAGGTGGCAAAAGATAGCGGCTTCGGTGCCGGGAAAAACAAAGGAGGAGTGTATGCAAAGGTGTAAATATTTATCGGAGTTAGTGAGAAAACAGAAACAAAAAGAAGAAGACGAAAGACAAGAGGGACAAGACATAACAAATGGCGATTTACAAGAGGAAATTGTGTCGTCGTAA
- Protein Sequence
- MFSKVHMELLCFILFILAVKAWDDGDLEVFDVVEEVNQNFYELLGVAQDAPMSEVKSAYKKLTLKLHPDKNDSPDADIQFRNLVSVYNILRDPGKREKYNDVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYAEKRYTAEQILNSRGKKHSKRTGFDTGLAEILEQLPKPSVKDTLPFQIPRFIWWLIMAIPRSVMEVKRIMKEKREEEERQKKREEEERQRLERESAAAAERASAGAAGGAARRRRGFVPQERERGCLLDAPDEPEKPAAVPHAPAAPVITGGLWTDDDLAELVRLVKKYPGGTADRWERIAESMCRSVPEVTHMAAKLKDNCYKIPGQETAEPVPEPPKKVKTRKAEEASGGNWSQTQQRALETALANHPKGGTGDRWQKIAASVPGKTKEECMQRCKYLSELVRKQKQKEEDERQEGQDITNGDLQEEIVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341229;
- 90% Identity
- iTF_01386659;
- 80% Identity
- -