Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_943735985.1
Location
CALSEZ010000163.1:340886-349127[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.71 6.7e+02 0.9 0.7 2 14 225 237 224 241 0.86
2 3 3e-06 0.0028 18.1 0.0 2 31 293 326 292 334 0.84
3 3 2.5e-10 2.3e-07 31.2 0.1 2 43 374 420 373 422 0.87

Sequence Information

Coding Sequence
ATGCGTCTAGAAGTATTATTTCTTTTTATATTTATATTAGCGGCCAGAGCTTGGGACGACGGTGATTTAGAAGTATTTGACGTGGTTGAAGAAGTTAATCAGAATTTCTACGAATTGCTTGGAGTTACTCAGGATGCCTCTCCATCGGAAATTAAATCAGCATTCAAAAGACTCACTCTAAAGCTACATCCGGATAAGAATGACTCTCCAGATGCAGATGTTCAGTTCAGGAACCTAGTATCTGTTCACAATATTCTCAAAGACCCTGGAAAAAGAGAGAAATACAATGATGTCCTTAAGAATGGCCTTCCAAACTGGCGATCTGCTGTATATTATTACCGTCATGTACGGAAGATGGGCCTTGCTGAGGGATCTCTCATCCTATTTATCATCATCTCATTTGGACAGTATGCTGTCGGATGGGCAGCATATGCAGAAAAGAGGTACACAGCTGAACAAATATTAAATAGCAGAGGAAAGAAACATTCAAAGAGAACAGGTTTTGATACAGGACTAGCAGAAATTTTGGAACAGTTGCCGAAACCGAGTGTAAAAGATACACTGCCATTCCAAATACCTATGTTCTTCTGGTGGTTAATAACAGCAATACCACGCAGCATAATAGAGTTAAAGAGGAGAATGAAGGAGAAGCAGGAAGAAGAAAAGAGACAGAAAAAGTGGGAAGAAGAAGAGCGTCAGCGGTTAGAACGCGAGGCGGCCGCGGAGAAAGTTCGCGCAGCCAGTGGGCCGGCGCGAAGACGCCGGGGCTTCGTGCCACCGGAGAAGGAGGGCTGCTTGCTGGACGCTGCGGATGAGCCGGAGGCCGACCGCCGCGGTACTGTGCCTATTAAACCGGCAGCACCAGTGATAACAGGCGGGTTATGGACAGACGATGATCTGGCAGAACTGATCCGTCTAGTCAAGAAGTACCCGGGTGGCACAGGGGAGAGATGGGAGAGGATCGCCGAGGCTATGTGCCGGAGTGTGCCAGAAGTGACACACATGGCGGCTAAGTTGAAAGACAACTGTTATAAATTGCCGGGCCATGAGGAGAAAGAACAGCCTATTGTGGAGCCTGTTAAAAAGGTGAAGACTCGCAAGAACGAAGAGTCTAGCGGCGGCAACTGGTCTCAGAGCCAGCAGAAAGCGTTAGAGGCGGCGCTGGCCAAGCACCCTAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATCGCCACCGCTGTGCCAGGGAAGACAAAGGAGGAATGCATGCAAAGGTGTAAGTATTTATCGGAGTTAGTGAGGAAACAGAAGCAGAAAGAAGAAGAAGAACAAGAGAAACAAACAGAAGACGACTTGCCAAACGGTGACAATACGCAGAACGAAGAGGTCAGCTCGTAA
Protein Sequence
MRLEVLFLFIFILAARAWDDGDLEVFDVVEEVNQNFYELLGVTQDASPSEIKSAFKRLTLKLHPDKNDSPDADVQFRNLVSVHNILKDPGKREKYNDVLKNGLPNWRSAVYYYRHVRKMGLAEGSLILFIIISFGQYAVGWAAYAEKRYTAEQILNSRGKKHSKRTGFDTGLAEILEQLPKPSVKDTLPFQIPMFFWWLITAIPRSIIELKRRMKEKQEEEKRQKKWEEEERQRLEREAAAEKVRAASGPARRRRGFVPPEKEGCLLDAADEPEADRRGTVPIKPAAPVITGGLWTDDDLAELIRLVKKYPGGTGERWERIAEAMCRSVPEVTHMAAKLKDNCYKLPGHEEKEQPIVEPVKKVKTRKNEESSGGNWSQSQQKALEAALAKHPKGGAGDRWQKIATAVPGKTKEECMQRCKYLSELVRKQKQKEEEEQEKQTEDDLPNGDNTQNEEVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-