Smyo014767.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- retn
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000965.1:23053-29717[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-19 2.2e-16 60.2 0.0 14 89 20 95 11 95 0.88
Sequence Information
- Coding Sequence
- ATGCGATGCGATTTTGCATGCTCCAGAGTTTATGACTTCTCAAGCCGAGATTACAACGAGAGCAGGGAGCTAAGAACACCCATCACTCGATTGCCAATAATGGCGAAATCAGTGTTGGACCTCTACGAGTTGTACAATTTGGTGATCGCCCGCGGAGGTCTAGTTGAGGTCATAAATAAGAAACTATGGCAAGAGATCATAAAGGGCTTACGATTGCCCTCTTCTATAACATCTGCTGCATTTACGCTTAGGACCCAATACATGAAGTACCTGTACGATTACGAATGCGACAAGAAGAATTTATCAACTCGCGGGGAACTCGATGCAGCCATCGAGGGTAACAAGCGCGAAGGACGACGTTCCTCGGGACAGTACGAAGCACAGGCAGCTATGAACATGCCACTAAACCGCGGTGTTCCGGTGCCGCTCAGTCAGTACTCGCAACACATGCCGCCTCTGCCTCTCTCCCTCGGCGGTGGAGTTCAAGGCGTACCTCGTTTGCCTCCTCATCCGCCACACATTTCTCCGCAAGAGTTAGAGTTCAGAGTTCGTGAATACGTGAAAGTGATGCAAAAACAACACAGAGATATTATAATGAACGGATCCGGACCTGAATCTCCGCCCAACAGCGCGTCTTTTGCAATGATGACGTCGCCTTCTGCTGCACTCAATGCCATGGACATGGGCCGAATGGCGTTATGGTCACTGTACAATAACAACACATTGACTACGCAACCGGATATAGAGCCACAACGTGAGGCTTTGAATCTAAGCGAAAGTCCGAACTTGATGAACGGTGGTATCAAGCGCGAAGGATCCCCGCTGTCTTCTCCGCCCAAGCGCCGTCCACCGCAACCGTCGCCTTCGCCTCGCGCCCTTTCGCCCCGCTCCCCTCGCGCCGCCCCTCATCCGCCCGCACCCGTCGCAGGCCCCTCGCACCCTACCTCACCGCCAGCCCTCAACGGAAACTCAAATGGCTTCAATGGAGCTGCTTTTAAGATTGTTACTAAAGATGACGCCAGCACTGGAGGTCAACAACTCCTTGTTTCCGTAGATATAAATGGCGTTACGTATGAAGGCGTATTGTACGCAACACAGAATGATCCAAATCACAGTTCAATAGTTTCATAA
- Protein Sequence
- MRCDFACSRVYDFSSRDYNESRELRTPITRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKKNLSTRGELDAAIEGNKREGRRSSGQYEAQAAMNMPLNRGVPVPLSQYSQHMPPLPLSLGGGVQGVPRLPPHPPHISPQELEFRVREYVKVMQKQHRDIIMNGSGPESPPNSASFAMMTSPSAALNAMDMGRMALWSLYNNNTLTTQPDIEPQREALNLSESPNLMNGGIKREGSPLSSPPKRRPPQPSPSPRALSPRSPRAAPHPPAPVAGPSHPTSPPALNGNSNGFNGAAFKIVTKDDASTGGQQLLVSVDINGVTYEGVLYATQNDPNHSSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386507; iTF_01385494; iTF_01388253;
- 90% Identity
- iTF_01386507; iTF_01385494; iTF_01388253;
- 80% Identity
- -