Sfor000523.1
Basic Information
- Insect
- Synanthedon formicaeformis
- Gene Symbol
- retn
- Assembly
- GCA_945859765.1
- Location
- CAMAON010000003.1:100406-106099[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-19 3.7e-16 59.5 0.0 17 89 25 95 9 95 0.91
Sequence Information
- Coding Sequence
- ATGCGATGCGATTTTGCATGCTCCACGGTTTATGACTTCTCAAGCCGAGGTTGCAACGAGAGCAGGGAACTAAGAACACCCATCACTCGATTGCCAATAATGGCAAAATCAGTGTTGGATCTCTACGAGTTGTACAATTTGGTTATCGCACGCGGAGGCTTAGTTGAGGTCATAAATAAGAAACTATGGCAGGAGATCATCAAGGGCTTACGATTGCCCTCATCTATAACATCTGCTGCATTTACGCTTAGGACCCAATACATGAAGTACCTGTACGATTACGAATGCGACAAGAAGAATTTATCAACTCGCGGGGAACTCGATGCAGCCATTGAGGGAAACAAGCGCGAGGGACGCCGTTCCTCGGGACAATACGAAGCACAGGCAGCTATGAACATGCCACTAAACCGCGGTGTTCCGGTGCCGCTAAGTCAGTACTCGCAACACATGCCGCCTCTGCCTCTCTCCCTCGGCGGTGGAGTTCAAGGCGTACCTCGTTTGCCTCCTCATCCGCCACACATTTCTCCGCAAGAGTTGGAGTTCAGAGTTCGTGAATACGTGAAAGTGATGCAGAAACAACACAGAGATATCATAATGAACGGATCCGGACCTGAATCTCCGCCGAACAGTGCGTCTTTTGCAATGATGACGTCGCCTTCTGCTGCACTCAATGCCATGGACATGGGCCGAATGGCGTTGTGGTCATTGTACAATAACAACACTTTGACTACGCAACCGGATATAGAGCCACAACGTGAGGCTTTGAATCTAAGCGAAAGTCCGAACTTGATGAACGGTGGCATCAAGCGCGAAGGATCCCCGCTGTCTTCTCCGCCCAAGCGCCGTCCACCGCAGCCGTCGTCTTCGCCTCGCGCCCTCTCGCCCCGCTCCCCTCGCACCGCCCCTCACCCGACCGCACCCGTCGCAGGGCCCTCGCACCCCACCTCACCGCCAGCCCTCAACGGAAACTCAAATGGCTTCAATGGAGCTGCTTTTAAGATTGTTACTAAAGATGACGCCAGCACTGGAGGTCAACAACTACTTGTTTCCGTAGATATAAATGGCGTTACGTATGAAGGCGTATTGTATGCAACACAGAATGATCCGAATCACAGTTCAATAGTTTCATAA
- Protein Sequence
- MRCDFACSTVYDFSSRGCNESRELRTPITRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKKNLSTRGELDAAIEGNKREGRRSSGQYEAQAAMNMPLNRGVPVPLSQYSQHMPPLPLSLGGGVQGVPRLPPHPPHISPQELEFRVREYVKVMQKQHRDIIMNGSGPESPPNSASFAMMTSPSAALNAMDMGRMALWSLYNNNTLTTQPDIEPQREALNLSESPNLMNGGIKREGSPLSSPPKRRPPQPSSSPRALSPRSPRTAPHPTAPVAGPSHPTSPPALNGNSNGFNGAAFKIVTKDDASTGGQQLLVSVDINGVTYEGVLYATQNDPNHSSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01387405;
- 90% Identity
- iTF_01387405;
- 80% Identity
- -