Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: ZNF236
Assembly: GCA_945859765.1
Location: CAMAON010000130.1:200752-212354[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.0091 16.6 0.7 3 20 189 206 187 210 0.94

2 12 0.031 1.8 9.4 2.0 1 23 249 271 249 271 0.94

3 12 3.6 2e+02 3.0 3.5 3 21 279 297 277 298 0.90

4 12 0.76 43 5.1 0.1 2 19 356 373 355 378 0.86

5 12 0.0006 0.034 14.8 0.8 1 23 412 435 412 435 0.96

6 12 1.9e-06 0.00011 22.7 3.5 1 23 456 478 456 478 0.99

7 12 5e-05 0.0029 18.2 6.6 1 23 485 507 485 507 0.98

8 12 1.3e-07 7.5e-06 26.3 2.3 3 23 520 540 518 540 0.96

9 12 3e-05 0.0017 18.9 3.2 1 23 546 568 546 568 0.99

10 12 2.8e-07 1.6e-05 25.3 3.2 2 23 575 596 574 596 0.97

11 12 1.5e-07 8.7e-06 26.1 1.5 1 23 602 624 602 624 0.99

12 12 2.1e-05 0.0012 19.4 0.1 1 23 630 652 630 652 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.0091	16.6	0.7	3	20	189	206	187	210	0.94
2	12	0.031	1.8	9.4	2.0	1	23	249	271	249	271	0.94
3	12	3.6	2e+02	3.0	3.5	3	21	279	297	277	298	0.90
4	12	0.76	43	5.1	0.1	2	19	356	373	355	378	0.86
5	12	0.0006	0.034	14.8	0.8	1	23	412	435	412	435	0.96
6	12	1.9e-06	0.00011	22.7	3.5	1	23	456	478	456	478	0.99
7	12	5e-05	0.0029	18.2	6.6	1	23	485	507	485	507	0.98
8	12	1.3e-07	7.5e-06	26.3	2.3	3	23	520	540	518	540	0.96
9	12	3e-05	0.0017	18.9	3.2	1	23	546	568	546	568	0.99
10	12	2.8e-07	1.6e-05	25.3	3.2	2	23	575	596	574	596	0.97
11	12	1.5e-07	8.7e-06	26.1	1.5	1	23	602	624	602	624	0.99
12	12	2.1e-05	0.0012	19.4	0.1	1	23	630	652	630	652	0.98

Sequence Information

Coding Sequence: ATGGCTGAAGTTATTGAGAATTTATGTCGAACATGTTTAATGAAAGAAGTGGAGTTAAATTCAGTGTTCGAAGTGTTCATAGGAGCGGTGAGATTGGACACAGTTATAAATGCAGTGACTGGTATAAATATTGAATGTGGAGATGGATTGCCATCAAGTGTGTGCGTAGAATGCCGTGAAAAAGCATTGAGTGCATTCAACTACAAGAGAAGATCTCAAGAATCTGAAATATCGCTTCGTAGTCTTTTAAATGATAAAAGAGACAAGGCAGAATATAAGAAGAAAAATCCGAACCGGCTCTTTTTGAAAATGAATGCAGTATTAAGACGGAACAATACAGTAGATATGATCATGAGTATGTGGATGAAGAAATTCCTGCTTCAGAGGAATATGGAGATTGTGACAATAAATTTAATTACAGTTAAAAATGAAAAGTCCTACCAGGACACCGAAACACAAAACCAATGCCAAGGGCCATTTTTAGAACTAGATCCAGTCAATGAATTGCAATATGATATCAACAGAAAGGTTGTAAAAGTTGAAAGTAATGACAGTAGCACATTTTGCCCACTATGTGGGACATGCTATGAAAATGCCGCCAACTTGACGAAACACATGTGGAGTGATCATGCCGAGTATATGGGCCCAAAAAAACGTGGGCGTCCAAAAAAAATGTTAACCAGTACAATATTAAATAAGTTATCGAAGAATGGCATTAATGTAAAGCCAGCGGTGGAGTCATATTTTGATTGCATGTTTTGTAAGCAACATTATAAAACCAAAGAAGATTTGAGCCTTCATATTGTGGAACACAAAGATATGAAAGTGTTGTGCTGTATGTTATGTAAGAAAATGTATATTGAAAGGAAATATTTCGAAAATCACACTTGTGTAGAAGGCAAACCTGAAGTCAAGTTAAAGGAGGAGCCTCCATTTTTGTCTACTGTCTTGACCACAGCCGATATAAGTGACGACAAAAATAAAAATATGGACTTTTTAACAGAAATGCTTTTGCAAGAGATTTTAGATCCTATTGGTGATGTGGAGAATTTCAATCTTTTGAAAGTGTGCAGCATTTGTAGTGAAGTTTTTTTCTCTGAGGACGAAATACTCAGCCACAATGACGCCGAACATCCCGAGCTCTCGCAACGTTGTAATTGTTGCTTGAAAGTTTTCGCTTCCACCAAGTCAGCGGCTCGCCACAGAGAGATTTGCAAACAAATCGAAAGAAAACATACATGTAGCAGTTGTGGACTGAGATTTGCATATGAAATATCACTGAACAAACACATTTTGAGGTGGCACGAGGGTCAGAGTGTTTCTGTGAAATTTATTGATCCAAAGACTAAACGCGATGAGAAGAAATATCAGTGTGACGTGTGCAACAAATGTTTCTACAGGAAAGATTTGTTAGCGAAACATACAAAGATTCACATGCCCGGCGAGAAGCAATTTGAATGTGAAATTTGTAAGAAGAAATTTCACCGAAGACACAATTTGAGGATACACAAACGTGTCCACGATATACAGAACGAAAAGGGTTCGTCAAATTGTTTGTGTTTGTACTGTGGACGCAGTTTTTCGAACTCTTCAAATTTAATAGTCCACATGCGAAGACATACGGGCGAAAAGCCGTATAAATGCGATTTCTGTGGAAAAGGATTCCCCAGGTCCTCGGATCTCCAATGTCATAGACGTTCTCATACCGGCGAGAAACCGTGCAAATGTAGTGTCTGTGGTAAAGCGTTCTCGCGTAGCAACAAACTGTCCCGGCATATGCGCGTACACACCGGTCTTAAGCCGTACAAGTGCACGTATTGTGAAAAGGCGTTTTCACAGAGCAACGATCTTACACTTCACATTCGTCGACATACAGGCGACAAGCCCTATATATGCGAGATCTGTGGTGAGAGATTCATTCAGGGCACAGCGTTGCAAAACCACAGGCGAGTCCACGGCCACTTTCCGTCGACTTCGTCGGAGATTCACGGCCCAGTTACGGGTCTCGTTACATTATACAGACCATAA
Protein Sequence: MAEVIENLCRTCLMKEVELNSVFEVFIGAVRLDTVINAVTGINIECGDGLPSSVCVECREKALSAFNYKRRSQESEISLRSLLNDKRDKAEYKKKNPNRLFLKMNAVLRRNNTVDMIMSMWMKKFLLQRNMEIVTINLITVKNEKSYQDTETQNQCQGPFLELDPVNELQYDINRKVVKVESNDSSTFCPLCGTCYENAANLTKHMWSDHAEYMGPKKRGRPKKMLTSTILNKLSKNGINVKPAVESYFDCMFCKQHYKTKEDLSLHIVEHKDMKVLCCMLCKKMYIERKYFENHTCVEGKPEVKLKEEPPFLSTVLTTADISDDKNKNMDFLTEMLLQEILDPIGDVENFNLLKVCSICSEVFFSEDEILSHNDAEHPELSQRCNCCLKVFASTKSAARHREICKQIERKHTCSSCGLRFAYEISLNKHILRWHEGQSVSVKFIDPKTKRDEKKYQCDVCNKCFYRKDLLAKHTKIHMPGEKQFECEICKKKFHRRHNLRIHKRVHDIQNEKGSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCKCSVCGKAFSRSNKLSRHMRVHTGLKPYKCTYCEKAFSQSNDLTLHIRRHTGDKPYICEICGERFIQGTALQNHRRVHGHFPSTSSEIHGPVTGLVTLYRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386054;
90% Identity: -
80% Identity: -