Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: ZNF236
Assembly: GCA_936447275.2
Location: CAKZFQ020000429.1:243298-253313[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00015 0.0091 16.8 0.7 3 20 131 148 129 152 0.94

2 12 0.0096 0.6 11.1 0.5 1 23 191 213 191 213 0.95

3 12 9.8 6.1e+02 1.6 2.6 3 21 220 239 219 240 0.87

4 12 1.3 78 4.4 0.1 2 19 298 315 297 320 0.86

5 12 0.00055 0.034 15.0 0.8 1 23 354 377 354 377 0.96

6 12 1.5e-06 9.5e-05 23.0 4.7 1 23 398 420 398 420 0.99

7 12 4.6e-05 0.0029 18.4 6.6 1 23 427 449 427 449 0.98

8 12 1.2e-07 7.5e-06 26.5 2.3 3 23 462 482 460 482 0.96

9 12 2.8e-05 0.0017 19.0 3.2 1 23 488 510 488 510 0.99

10 12 2.9e-07 1.8e-05 25.3 2.4 2 23 517 538 516 538 0.96

11 12 1.4e-07 8.7e-06 26.3 1.5 1 23 544 566 544 566 0.99

12 12 6.3e-05 0.0039 17.9 0.3 1 23 572 594 572 594 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00015	0.0091	16.8	0.7	3	20	131	148	129	152	0.94
2	12	0.0096	0.6	11.1	0.5	1	23	191	213	191	213	0.95
3	12	9.8	6.1e+02	1.6	2.6	3	21	220	239	219	240	0.87
4	12	1.3	78	4.4	0.1	2	19	298	315	297	320	0.86
5	12	0.00055	0.034	15.0	0.8	1	23	354	377	354	377	0.96
6	12	1.5e-06	9.5e-05	23.0	4.7	1	23	398	420	398	420	0.99
7	12	4.6e-05	0.0029	18.4	6.6	1	23	427	449	427	449	0.98
8	12	1.2e-07	7.5e-06	26.5	2.3	3	23	462	482	460	482	0.96
9	12	2.8e-05	0.0017	19.0	3.2	1	23	488	510	488	510	0.99
10	12	2.9e-07	1.8e-05	25.3	2.4	2	23	517	538	516	538	0.96
11	12	1.4e-07	8.7e-06	26.3	1.5	1	23	544	566	544	566	0.99
12	12	6.3e-05	0.0039	17.9	0.3	1	23	572	594	572	594	0.98

Sequence Information

Coding Sequence: ATGGCTGAAGTTATTGAGAATTTATGTCGAACATGTTTAATTAAAGAAGTAGAATTAAATTCAGTGTTTGAAGTGTTCATAGGAGGGGTGAGATTGGACACCGTTATAAATGCAGTGACCGGTATAAATATTGAATGTGGAGACGGATTGCCGTCAACTGTGTGCGTAGAATGCCGAGAAAAAGCTTTAAGTGCATTCAACTACAAGAGAAGATCTCAAGAATCTGAAATATCGCTTCGTAGTCTTTTAAAAGACAAGACAACATATAAGGACGGCGAAACACAAAACCAATGCCAAGAGACATTTTTAGAATTAGATCCAGTCAATGAATTGCAATATGATATCAACAGAAAAGTTGTCAAAGTTGAAAGCAATGACAGCAGCACATTTTGCCCACTATGTGGGACATGCTATGAAAATGCTGCCAACTTGACGAAACACATGTGGAGTGATCATGCCGAGTTTATGGGTCCAAAAAAACGTGGACGTCCAAAAAAAATGTTAACCAGTACAATATTAAATAAGTTATCGGAGAATGGTATTCATGTAAAGCCAGCGGTGGAGTCATGTTACGTTTGCATGTTTTGTAAGCAACGTTATAAAACCAAAGAGGATTTGGGCCTTCATATTGTAGAACACAAAGATATGAAAGTGTTATGCTGTATATTATGTAAGAAAATGTATATTGAAAGGAAATATTTCGAAAATCACACTTGTGTAGAAGGCAAACCTGAGGTCAAGTTAAAGGAGGAGCCTCCATTTTTGTCTACCGTCTTGACTACAACCGATGTAAGTGATGACAAAAATAAAAGTATGGACTTTTTAACAGAAGTGTTTTTGCAAGAGATCTTAGATCCCATTGGTGATGTGGAGAATTTCAATCTTTTGAAAGTGTGCAGCGTTTGTAGTGAAGTTTTTTTCTCTGAGGACGAAATACTCAGCCACAATGACGCCGAACATCCCGAGCTCTCGCAACGTTGTAATTGTTGCTTGAAAGTTTTCGCTTCCATCAAGTCAGCGGCTCGCCATAGAGAGATTTGCAAACAAATCGAAAGAAAACATACATGTAGCAGTTGCGGACTGAGATTTGCATATGAAATATCACTGAATAAACACATTTTGAGATGGCACGAGGGTCAGAGTGTTTCCGTGAAATTCATTGATCCAAAGACTAAACGCGATGAGAAGAAATATCAGTGTGACGTGTGCAACAAATGTTTCTACAGGAAAGATTTGTTAACGAAACATACAAAAATTCACATACCCGGCGAGAAGCAATTTGAATGTGAAATTTGTAAGAAGAAATTTCACCGAAGACACAATTTGAGGATACATAAAAGAGTCCACGAAATACAGAGCGAAAAGGGTTCGTCGAATTGTTTGTGTTTGTACTGTGGACGCAGTTTTTCGAACTCTTCAAACTTAATAGTTCACATGCGACGACATACGGGCGAAAAGCCGTATAAATGCGATTTCTGTGGAAAAGGATTCCCCAGATCCTCGGATCTCCAGTGTCATAGACGGTCTCATACCGGCGAGAAACCGTGCAAATGTGGTGTCTGTGGTAAAGCGTTTTCGCGTAGCAACAAACTGTCCCGACATATGCGCGTACACACCGGTCTTAAGCCGTACAAGTGCACGTATTGTGAAAAGGCATTTTCACAGAGCAACGATCTCACACTTCACATCCGTCGACATACAGGCGACAAGCCCTATATATGTGAGATCTGTGGTGAGAGATTCATTCAGGGCACAGCGTTGCACAACCACAGGCGAGTCCACGGCCACTTTCCGTCGACTTCGTCGGAGATTCACGGCCAAGTTACGGGTCTCGTTACACTATACAGACCATAA
Protein Sequence: MAEVIENLCRTCLIKEVELNSVFEVFIGGVRLDTVINAVTGINIECGDGLPSTVCVECREKALSAFNYKRRSQESEISLRSLLKDKTTYKDGETQNQCQETFLELDPVNELQYDINRKVVKVESNDSSTFCPLCGTCYENAANLTKHMWSDHAEFMGPKKRGRPKKMLTSTILNKLSENGIHVKPAVESCYVCMFCKQRYKTKEDLGLHIVEHKDMKVLCCILCKKMYIERKYFENHTCVEGKPEVKLKEEPPFLSTVLTTTDVSDDKNKSMDFLTEVFLQEILDPIGDVENFNLLKVCSVCSEVFFSEDEILSHNDAEHPELSQRCNCCLKVFASIKSAARHREICKQIERKHTCSSCGLRFAYEISLNKHILRWHEGQSVSVKFIDPKTKRDEKKYQCDVCNKCFYRKDLLTKHTKIHIPGEKQFECEICKKKFHRRHNLRIHKRVHEIQSEKGSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCKCGVCGKAFSRSNKLSRHMRVHTGLKPYKCTYCEKAFSQSNDLTLHIRRHTGDKPYICEICGERFIQGTALHNHRRVHGHFPSTSSEIHGQVTGLVTLYRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386955; iTF_01388757;
90% Identity: -
80% Identity: -