Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: -
Assembly: GCA_945859765.1
Location: CAMAON010000056.1:310321-313607[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.2 1.6e+03 -0.5 0.0 16 24 49 57 45 71 0.84

2 9 0.0017 1.2 9.4 0.1 11 43 97 126 94 127 0.87

3 9 3.1 2.2e+03 -1.0 0.3 18 29 177 188 173 200 0.80

4 9 0.54 3.8e+02 1.4 0.3 15 26 202 213 189 218 0.82

5 9 0.46 3.2e+02 1.7 0.0 16 27 231 242 227 247 0.86

6 9 2.6e-05 0.018 15.3 0.5 12 43 257 285 244 286 0.85

7 9 0.01 7.1 7.0 1.8 5 26 279 300 279 307 0.89

8 9 0.0014 0.97 9.7 1.0 8 38 311 337 304 340 0.80

9 9 2.5e-06 0.0017 18.5 3.1 5 44 336 371 332 371 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.2	1.6e+03	-0.5	0.0	16	24	49	57	45	71	0.84
2	9	0.0017	1.2	9.4	0.1	11	43	97	126	94	127	0.87
3	9	3.1	2.2e+03	-1.0	0.3	18	29	177	188	173	200	0.80
4	9	0.54	3.8e+02	1.4	0.3	15	26	202	213	189	218	0.82
5	9	0.46	3.2e+02	1.7	0.0	16	27	231	242	227	247	0.86
6	9	2.6e-05	0.018	15.3	0.5	12	43	257	285	244	286	0.85
7	9	0.01	7.1	7.0	1.8	5	26	279	300	279	307	0.89
8	9	0.0014	0.97	9.7	1.0	8	38	311	337	304	340	0.80
9	9	2.5e-06	0.0017	18.5	3.1	5	44	336	371	332	371	0.84

Sequence Information

Coding Sequence: ATGGAGAATAGAGGTGCGATATCTAATACAGTGGAGGACAAACGTAGAAAAACTCAAATGGCCCAAAAGTTGATGATAAAGCGGCGGAATTTGGAGTATATTTTACAATACAGCAACGTCACACCATTTATGTGGTACAAGGCGAAGTATCGATGCTTCTACTGCGTAGAACCTTTCAAAGATCCCGACCTCCTCAAGGTGCATACGGCCAGTGTGCACCAATTCGCCAATTTAGAACTGGTCATATTCGACAGAACCAAAAAGAATAGGAACCGCGATGCAGCAGTCAAGATTGATGTGACCAATATTGTTTGCAAGCTGTGTAATCAGCCCATAGAAAACTTGGAGCAGCTGATACACCATTTGATCATAGCTCACGATGCAGAATACGACGTGAGCGTACCAAATTGCTTGCTGCCCTTCAAACTCGACAAGGAATCGCCTACCTGTCCCACGTGCAATACGAAGTTTGTCTTCTTCGAATACCTCCTGCGACACGCCAATAAGTATCATCTATCCCACGATTACATATGTGATATATGCGGAACAAGTTTCCAAGGGGAGAACCACTTGAAAATGCACAATAGATATTATCACAGGGAAGGCGGTTACACGTGCGACCATTGCGGTGTGACTCTGGTGACACTGTCTAAGAAAATACTCCACGAGAAGAATGTGCATTTGGCCAATTTGGCGACGTGTCCCCATTGTCCAGAGACATTTAAAAGTCCATACTTTAAAAAGATACACATGGCGAACGTGCACGGGGTGGAGGAGTTGAAAATCAAATGTCCTTATTGCCCGAAAGTGTATCCTCAAGAGAGTATAATGTCGAGGCATATGAGACGCGTGCATTTGAGGGAGAAGAATGTTGAATGTGAGGTTTGCGGTGATAAGTTTTTCGGGTCGTATGACGTGAAACTGCACATGCTAAAGCACAATGGCGAAAAGAAATACGTTTGTCCCGTGTGCGGTAAGAAATTCTCTAAAAAGAGTAATCTGAATTCTCACTACGTGATTCACTCAGAGAAGAAGGGTTATGTGTGTGAGTTTTGTAATAAGAGTTTCTCGTACGAGACTAATTTGAGAGTGCACATTCGTACCAGACACTCGACAGAATACGTGATCATAGAAGAAAACGGAGATCAAGTGGAATTAGACCCTGGTGAAGTGATTCAGTACATTACAGATGAGTTTGACAACTCACAAATTACTGGACAGTACACCTTGGGGTGA
Protein Sequence: MENRGAISNTVEDKRRKTQMAQKLMIKRRNLEYILQYSNVTPFMWYKAKYRCFYCVEPFKDPDLLKVHTASVHQFANLELVIFDRTKKNRNRDAAVKIDVTNIVCKLCNQPIENLEQLIHHLIIAHDAEYDVSVPNCLLPFKLDKESPTCPTCNTKFVFFEYLLRHANKYHLSHDYICDICGTSFQGENHLKMHNRYYHREGGYTCDHCGVTLVTLSKKILHEKNVHLANLATCPHCPETFKSPYFKKIHMANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGSYDVKLHMLKHNGEKKYVCPVCGKKFSKKSNLNSHYVIHSEKKGYVCEFCNKSFSYETNLRVHIRTRHSTEYVIIEENGDQVELDPGEVIQYITDEFDNSQITGQYTLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01387831;
90% Identity: iTF_01388774; iTF_01388712; iTF_01387789; iTF_01387831; iTF_01386970;
80% Identity: iTF_01386970;