Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: -
Assembly: GCA_945859765.1
Location: CAMAON010000091.1:160981-165656[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.059 42 4.5 7.5 11 43 178 211 174 212 0.82

2 17 0.18 1.3e+02 2.9 1.8 3 30 195 222 193 228 0.86

3 17 0.044 31 4.9 2.0 12 41 232 258 224 261 0.79

4 17 6.5 4.6e+03 -2.0 3.9 18 43 266 288 259 289 0.86

5 17 0.00022 0.16 12.3 4.1 14 43 360 386 353 387 0.85

6 17 0.00046 0.32 11.3 2.5 13 43 392 419 386 420 0.87

7 17 0.026 18 5.7 0.7 18 39 428 446 423 451 0.77

8 17 0.00011 0.074 13.3 2.9 13 43 456 483 448 484 0.86

9 17 6.2e-05 0.043 14.1 1.7 12 43 488 516 483 517 0.88

10 17 0.024 17 5.8 0.4 16 43 520 544 518 545 0.86

11 17 0.0025 1.8 8.9 0.1 18 43 553 575 547 576 0.86

12 17 2.9e-05 0.02 15.1 2.2 15 43 580 605 578 606 0.92

13 17 0.0064 4.5 7.6 1.6 16 32 609 625 607 634 0.82

14 17 0.00011 0.077 13.3 0.2 6 44 633 665 630 665 0.89

15 17 0.0033 2.3 8.5 0.2 18 43 671 693 669 694 0.89

16 17 0.085 60 4.0 1.4 16 29 697 710 695 722 0.82

17 17 0.044 31 4.9 1.3 16 35 725 741 715 749 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.059	42	4.5	7.5	11	43	178	211	174	212	0.82
2	17	0.18	1.3e+02	2.9	1.8	3	30	195	222	193	228	0.86
3	17	0.044	31	4.9	2.0	12	41	232	258	224	261	0.79
4	17	6.5	4.6e+03	-2.0	3.9	18	43	266	288	259	289	0.86
5	17	0.00022	0.16	12.3	4.1	14	43	360	386	353	387	0.85
6	17	0.00046	0.32	11.3	2.5	13	43	392	419	386	420	0.87
7	17	0.026	18	5.7	0.7	18	39	428	446	423	451	0.77
8	17	0.00011	0.074	13.3	2.9	13	43	456	483	448	484	0.86
9	17	6.2e-05	0.043	14.1	1.7	12	43	488	516	483	517	0.88
10	17	0.024	17	5.8	0.4	16	43	520	544	518	545	0.86
11	17	0.0025	1.8	8.9	0.1	18	43	553	575	547	576	0.86
12	17	2.9e-05	0.02	15.1	2.2	15	43	580	605	578	606	0.92
13	17	0.0064	4.5	7.6	1.6	16	32	609	625	607	634	0.82
14	17	0.00011	0.077	13.3	0.2	6	44	633	665	630	665	0.89
15	17	0.0033	2.3	8.5	0.2	18	43	671	693	669	694	0.89
16	17	0.085	60	4.0	1.4	16	29	697	710	695	722	0.82
17	17	0.044	31	4.9	1.3	16	35	725	741	715	749	0.79

Sequence Information

Coding Sequence: ATGATAGAACTTAGCAAGAAGAATAATAATCATAGTTCCAACTTGCCGATTCAGGATTATTCTCCCTTGACAGATATGTCATCCTCAGCTGCCAATTCAGAAAAAGGTAGTAAAGATGATATGCCATCTGAGGATAGGGGGGCCGAGAATGCTGATCAAGGTCAAATTTCACCCGAAGAGGATGAAGGAACTGAGAGCGATGGATATCAAACCCCACAAGAAACAACATCGCAAAGACCTCAGAGGAGCAAGAAAAAGCCTATGTGGACAAATGACTACTACTTGTCAGACGATATGGAAGACAAGGAGCCATTAATTGAAAACGATGTCCCAATTAAAATAGAGAAAATGTATAGTTATGCTTGCAGCGACAAAGAAGGACCGTTGATTAAAGTCGACATAAAAGTTGAAAAGGAAGAGACTCCCACTCCCAACGATGAAGACAATCACTCAGATATAAATGTGGTTTTAGATGAAGTATCCAATCGAGATGGCAAAATTGAAGAGAGCGCAAACGAATTAGATGAATCTGAGAACGACAGACACGAGAATAAATGCAATATTTGCAATAAAACTTTTAGATTCAAAAAGTACCTAGAAAGTCACATGAAGACGCACTTTAAACATCGCTGTGAAGTATGCAGTAGAGATTATCAGAGCAAAGGTGAATTGCGTAAGCACGAAATGGTGCATAAGGATGAGAGAAAGTTTAAATGCTCAATATGTAATAATGGATTTACACTGAGCAGAAGTTTGAAGGCTCACATGAAAACACACAAGGTTGGAACACCGCACGAGTGCCAAGAGTGCGGCCGGAAATTCAAAGTCAAAAATAGCTTATTGAGGCATTGTCAAAACATGCACACGGGTGTAAACAAGTACAGTTGCCAGTATCAGTGCGAAAAATGCAATAAATCGTTTAGAAGCAAAGATGCTTTGCTAAGTCATAAAAAAGTGCATGAGAAACATGAGCCTTACAATTGTGACCTGCGTGAAAATAAATTCAAAAGAAGAGAAAATTCCAAGCAAAATCTACGCAGTCATATGTCGGTTGTACATTTGGGCATTAAGCCAACGGCCACTACAATTGAGTGCCAAATTTGCAAAAAGACATATAAATCTAATAAAACTCTACGCAGGCACATGTCGGTTGTACATTTGGGCATTAAGCCAAAGCCCACTGCTGTTGAGTGCCACATTTGCAAAAAGACATTTAATTTCAAACAGAATTTAAGCAGGCACATATCGGCTGTACATTTGGGTTCTGAGTTAACACCCCTAGAATGTGACATTTGTAAAAAGACATTTAAATCCAAGGAGACTATACGCCAGCACATGTTGGCTGTACATTTGGGCTTGAAGCAAACACGCACTGCCACTGAGTGCAACATTTGCAAAAAGACATTTAAATCCAAGTCTAATATACGCCAGCACATGTTGGCTGTACATTTAGGCTTGAAGCAAACACGCACTGTCACTGAGTGCGACATTTGCATGAAGACATTTAAATACAAATATAATTTAAGCAGGCACATTTCAGCTGTACATTTGGGCTTTAAGCTTAAGTGCGACATTTGCAAACAGATATTTAAATCCAAACAGATTTTAAGCAGGCACATGTCGGCTGTACATTTGGGTTCTGAGTTAACACCCCTTGAATGTGACATTTGCAAAAAGGCATTTAAATCCAAGTCTAATATACGCCAGCACATGTTGGCTGTACATTTGGGCGTTAATACTGCAATTGAGTGCCACATTTGCAAAAAGACATTTAAATACAAACAGAATTTAAGCAGGCACATGTCTGCTGAACATTTGGGCCTTAAGGCTCAGTGCGAAATTTGCAAGAAGATATTTAAACACAAGAATAGTGTGCGCCAGCACATGTTGGTTGTACATGTTGGCTTTAATCCAACGGCCACTGATTGCGACATTTGCATGAAGACATTTAAATATAAACAGGGTTTAAACAGGCACATGTCGGCTGTACATTCGGACCTTCCACCCACTCAGTGCGACATTTGCATGAAGACATTTAAATCCAAGGATAATATACGCCAGCACATGTTGGCTATGCATTTGGGCTCTAAGTTTAAGTGCGACATATGCAAGAAGACATTTAAAACCAAGAATTATATACGCATGCACATGTTGGCTGTACATTTGGGCTTTAAGTTTAAGTGCGACATATGCAACAAGACATTTATATACAAACAGAGTTTAAGCAGGCATAAGTCGACTGTACATTTGGGCTTGAAGCAAATACGTACTAAAAGAAAAGTTATTTAA
Protein Sequence: MIELSKKNNNHSSNLPIQDYSPLTDMSSSAANSEKGSKDDMPSEDRGAENADQGQISPEEDEGTESDGYQTPQETTSQRPQRSKKKPMWTNDYYLSDDMEDKEPLIENDVPIKIEKMYSYACSDKEGPLIKVDIKVEKEETPTPNDEDNHSDINVVLDEVSNRDGKIEESANELDESENDRHENKCNICNKTFRFKKYLESHMKTHFKHRCEVCSRDYQSKGELRKHEMVHKDERKFKCSICNNGFTLSRSLKAHMKTHKVGTPHECQECGRKFKVKNSLLRHCQNMHTGVNKYSCQYQCEKCNKSFRSKDALLSHKKVHEKHEPYNCDLRENKFKRRENSKQNLRSHMSVVHLGIKPTATTIECQICKKTYKSNKTLRRHMSVVHLGIKPKPTAVECHICKKTFNFKQNLSRHISAVHLGSELTPLECDICKKTFKSKETIRQHMLAVHLGLKQTRTATECNICKKTFKSKSNIRQHMLAVHLGLKQTRTVTECDICMKTFKYKYNLSRHISAVHLGFKLKCDICKQIFKSKQILSRHMSAVHLGSELTPLECDICKKAFKSKSNIRQHMLAVHLGVNTAIECHICKKTFKYKQNLSRHMSAEHLGLKAQCEICKKIFKHKNSVRQHMLVVHVGFNPTATDCDICMKTFKYKQGLNRHMSAVHSDLPPTQCDICMKTFKSKDNIRQHMLAMHLGSKFKCDICKKTFKTKNYIRMHMLAVHLGFKFKCDICNKTFIYKQSLSRHKSTVHLGLKQIRTKRKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386932;
90% Identity: iTF_01386932;
80% Identity: iTF_01386932;