Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000346.1:537632-563432[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.62 39 5.4 0.1 2 23 472 493 471 493 0.93

2 16 0.0019 0.12 13.3 0.1 1 23 503 526 503 526 0.96

3 16 0.092 5.7 8.0 4.1 2 23 744 765 743 765 0.95

4 16 1.4 84 4.3 0.8 1 23 777 801 777 801 0.91

5 16 0.00048 0.03 15.2 0.6 2 23 808 831 807 831 0.97

6 16 0.093 5.8 8.0 0.2 1 23 837 859 837 859 0.93

7 16 0.017 1 10.3 3.4 1 23 865 887 865 887 0.98

8 16 1.2 75 4.5 0.1 2 19 898 915 897 918 0.88

9 16 0.004 0.25 12.2 0.2 1 23 998 1020 998 1020 0.98

10 16 3.6 2.2e+02 3.0 6.3 1 23 1027 1049 1027 1049 0.95

11 16 0.0019 0.12 13.3 1.8 1 23 1085 1108 1085 1108 0.95

12 16 0.0023 0.14 13.0 0.4 1 23 1115 1138 1115 1138 0.97

13 16 0.015 0.96 10.4 0.1 2 23 1158 1180 1157 1180 0.96

14 16 0.00014 0.009 16.8 3.0 1 23 1352 1374 1352 1374 0.99

15 16 0.00016 0.01 16.6 0.1 1 23 1380 1402 1380 1402 0.97

16 16 0.00012 0.0073 17.1 0.6 3 23 1410 1431 1408 1431 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.62	39	5.4	0.1	2	23	472	493	471	493	0.93
2	16	0.0019	0.12	13.3	0.1	1	23	503	526	503	526	0.96
3	16	0.092	5.7	8.0	4.1	2	23	744	765	743	765	0.95
4	16	1.4	84	4.3	0.8	1	23	777	801	777	801	0.91
5	16	0.00048	0.03	15.2	0.6	2	23	808	831	807	831	0.97
6	16	0.093	5.8	8.0	0.2	1	23	837	859	837	859	0.93
7	16	0.017	1	10.3	3.4	1	23	865	887	865	887	0.98
8	16	1.2	75	4.5	0.1	2	19	898	915	897	918	0.88
9	16	0.004	0.25	12.2	0.2	1	23	998	1020	998	1020	0.98
10	16	3.6	2.2e+02	3.0	6.3	1	23	1027	1049	1027	1049	0.95
11	16	0.0019	0.12	13.3	1.8	1	23	1085	1108	1085	1108	0.95
12	16	0.0023	0.14	13.0	0.4	1	23	1115	1138	1115	1138	0.97
13	16	0.015	0.96	10.4	0.1	2	23	1158	1180	1157	1180	0.96
14	16	0.00014	0.009	16.8	3.0	1	23	1352	1374	1352	1374	0.99
15	16	0.00016	0.01	16.6	0.1	1	23	1380	1402	1380	1402	0.97
16	16	0.00012	0.0073	17.1	0.6	3	23	1410	1431	1408	1431	0.95

Sequence Information

Coding Sequence: ATGGACAATATTCAGCCACCGTTATTACTGTACCTAAAGAACACGGCTGGAGAAGATGTTGCACTAGAGATAAGATCAGAAGACGATTTCCAGACATTCCTAGATAAAGCGAAATCCTTATTAGGTTTCGACATAGACATAAACTCCATAACTAGAAATCAACCGGTTTCATTACAAGACAATGTTTATGAATTCCTTGAAAATGAACAAAATTCAACTGTTGGCCTACAACCAATAATCGATCCATTGTTGGAGCCTACCAATGAAGACACGGGTTTAGTGTACGTTTTAGATGACGGAACACAAATAAATGCGTCACAGATACATTTCGATAATGACGAACCTCCAGTGGACTTAACACTCGAGAAATTGCCGTTTGTCAAATATTCAGACGCAATCGACGAAGACTCCGAACCGGAATACACTGATGTCCGCAAAATAAATATAGTAGAAAGTCCAGTTTCGCATTGGCTCAGTGATAGTTCAAGTTCTAAATGTGATTTCGGTAATACGTTACCATTTAAAATTGTATGCAATAACACAAGCGGGTTTGAAGCGCAATTCACTAAATATTTGGAAGAAGCTACAAAACCATCGGCAGTTGTAACAGGTGTAACAGAAGATCTCACTCAATACGATGATGAAAAGAAGGAGAGAGATTTCAGTGCATTTACTAGAGAAGAAGTTATTAATATGTTTAAGGACTCACCTGTGAATTCACTGCCTTATGACAAGAGTAATTTCAATGAAAGAAAACATATTAGGAAAACTGATCCATTAAGGCCGATTCCTAAGAATTGGACTCCAAAACCTATAACGTACTTAGATGTAGATGGCACATTGATAGGTCAAAATGAATGTCAAGATTGTTATATTTGTGGTATATTTATAGAGAACAGTTTCGAGAAGTTGTATTTATTTGACAACGAAGATCAGAGATTGCATCGTTCGTCGTCACAAAAGAAGTTGTATACACAACTGAAGATTCTTTGCCAGAAATGTTTGGATGAGAATTTCAAACCGTGTTTCTCCAAGAATCCGAACCAACCGCTAAATTCTGATGAGGTCTTGATAATCAAGAACAATCAGCAGTATATTTATCAAGTGATTGGCGATATTAAAGGTCTCGGTCTAGCAAAATCTGAACAAAAGATTGACGACGAAATATTTGAGGGGATGGAATTTTCAAAACTCAAAATCGGTCCAAAGTGTGAAATAATTACTGGTTCCTTGGACAATGACGATCAACATTCTGATGATGTAGTCATTGTAAAAGACGAGGGTTCGAGCGATGTTGAAATTATTGAAGAGCCGGAAATTGATGACATCGAAAATTTAGAAGAAGCTGATGAAGAGGTCAAAGAGTTTTTAGGAAAATGCGAGCGTGATGATAACGGGGAATCTAAAGAAATGAAATGCAGGTTTTGCGAGCGTGCATTTATAAGTCTAGAAGAAGTAATCGAACACGGTAACGAACACAAGCACGAAACAGACGACGGGGAGGTTTATCCGTGTCCGCTTTGCAATTACGGTTATGCCAACTTCAAATGGTTGAGGGCACATTTGAAAGCAGCTCACGATGTTACGAAAGAAATAAAGCAAGAAGAAAACACTAAAAATGATGAAGAAACGAAAGAAAATATAAAAAACGAGGAAACAAAGTCGCCGGTCTCAAAGGAGTGTTGTTCGCCAATCGCCAAAAGAACAAGAAGTGCTAATAAGAATAAAAATACTGTTAGGCAGAAAGAAGAAAAAGAAGAAGAGAAAAATGATCCGCCTAAAGGAGAGTCGAGACAAGAGCTAGACACTAAAGAAGCGGTGGAACCTTGTGTAATGAAAACAGAAATGAAACAAGAAGCTTTGGATTCTAGTGACGAAGAATCCATTTGGATCGTTCATACGGCAGACGAGGGTGGGGCCGCACAGCTTGAGAAATTTTTCTGTAAAAAGGAACCAAGAAAAAGTCAGAATAATGGATTCAAGAGGATGATTCGATGTCCAACATGCAATGAAATATACTGCGAGACAGACCCGCCTCACACGTGCAGTCGTCGCGGGAGAAAACGCAAAGTGGTCAGCGACTGTTCTGAAATATTTGTGCCGACTGAGGAGGATTTCATCAAGAGAGCTCAAGGTCGACCCAGGCGCAAAGACGAATGTGACAATCTCTTAGTCCCGAGAGTTCAGAAAAGGAAGAATAAGGAGCCGACATCGGATCCGCAAGTCGTCACCTGTCATAACTGCAACATGTCGTTCACATCTAAAGTCCGTCTAAAGTTTCACATGCAGTTCCACGATCCGACGGCCATGTTGACGGATGAGGGCGCATACGCGTGCACCGAATGCAAAGACGCCACTTTCGCGACGGAGACGGAACTGTTCGACCACATACACTTTCAGCACAGCAAGCAGCGCAGGTGGCAATGTCCCGTCGAGGATTGCAAGAAGATGTTCTATTTGAGAGCGACTTTGACCAAACACAGTCGCACGCACACGGACACGCGCCGCTACGTGTGTGTCACTTGCGGCAAACGATTCTTGGACAAGCAGACGTTGGACGAGCACGGGGTCACCCATTTACAGATAAAGCCGTTCCAATGTCACATATGCATGAAACAACTGACGAGACGCTCTCGTCTGAGGATGCACCTTCGGGCTCACGAGGAGGAACTGTCTCCGACCCTCGTGCTGGTCTGCGCCGTGTGCAGTAGAGCCTTCAGGGACCACCAAGACGCTCAGGAACACGCAACTAAATCGAGCGAGTGTATAGAAATGTTTGCGAACGAACTGAAGGAAGAAGAGGAAAGCCTGACGTCAGTCCAATTGTCGCCTACGAGCGGATTGGTAACGAGTAACACAAATTTTAAGGAGCCATCCCGCTTCACCAACCCGATTCCTCGTCAGGTGGCGGATCAGATTGGTGAGAAGTTGCTGTCCCAGTTGCCTGATGAAGCGAAGAATATCATAAGGGTAGTGGAAATAGAGAAAGCCTTTCGATGCGAGTACTGCGAAGATGTATTCTATACGGAGGGTGGCTTGAACAAGCATCGGATTATACACAAGGGCGTGAAAAACCCATTTGTATGTCACGTATGCAAAGTTAGCTTCGCAACATACTCCAGGTGCACTACACACAAAACAACGCACGGCTTCTACAAGCGTTCAATGGCTGATGTAAAAACAAAAGAAGCAAATCAGTCTGCCTCGTCTACTGGTATAGTCGGTTATGGGGGGTTTCCGGTGGTCAAGCATTTTCTGTGCGAGGATTGTGGTCGTTCGTATTTGCATTGGACCTATTTACAAGTTCACAGAAGAATGAAACACGCGAACGAGAATCTATTGTACAAGTGTAATGAGTGCGATGTAACGTTTCCAAACAGTTGGAGTATAGCGTATCATAAAAAGAAAGTTCACAGTAACGCTATAGATGGCGTCGGCACTACAAAAACACCAATTCATTTTTACAGGATACAATGTCGTGATTGCGACGAAGTTTTGCCGAATAAAATTGCACTCTACCAACATAGAAAGAAGGAACATAGTGACTCGTCACTCGCATTTGATTGTACACAGGTCCGTAGAATCAGAAAGTTGACTGTAGTTACTGACTCGGTCTTTTTGGAAAATTACGATTTCGAACATGATAAATTACGAGGATTTTTTTGGGAGAGGATCTTCTTCCCGCTACATTACCAGCGCGGACTTTGGCCTTTCTGCCATTTTGTGAACAGTTCACAAAATGTGAGCATCGCCTACACTTGCCGGCCTATAACCGTGAATGGCGATGATGACAACGATGATGACGACGACGACGACGACGACGACGACGACGACGACGATGATGATGATTTTGATGATTTATACTGTATGTTTTACAGACGATTCGTGGTCAGACAATGCTCAACAAGCGAGCACATCCATAGCTTATTCTCCTTCAACGAAGACATGTGGGAAGTTCACGGCAACGAATTGCAAACGTGCACAATATGCTGCAAGTGGTTCCCGAGCCGCGAGGAGCTGCAGTGTCACGTGCGATCGCACGCGTTGCGTCCGTACACTTGCTCGCAGTGCGGCCACTCGTTCCGCACGGCGTCCATGCGCAGCGAGCACTTGCGGACGCACACGGGCGAGCGTCCGTTCCCGTGCGACGTGTGCGGCGTCGCCTTTAGACGATCAACAGCGATGCGCAATCACCGCTTGATCCACACCGGTGTCCGACCTTGGGCGTGCCCTCGATGCCCCAAAAAGTTCCGCATAAGGTCAGATTTGCGAACCCATCTCAGGCTGAAGCATCCGGCCTATTTGGCCGTCATTGAGATGCCAACTGAAAATCCAAACGAGGAAGAAATAATCGAACAGCTCCACTTGAATAATATTGCGTTGCAGAAAGTCATTTCAATCAGCAAAATATCGTTTGAACAAGGTTCCGATAGTATAGTACCGAATTCGGCCCGGGCCTTGTCGTTGGTTGGCGTTTCTCGCACACCAATAATACTCAGTCGCAGGCCCCCAGAGAAGATTGATGAGTTTCAGGCGGTACGTCGCGGTCGAGGCATAGCTAAGAACCCGCGGAGGCCTAAAATGTTGCAACAATCGGCCACCGAATCTCAACAAGACAATGTCTACCCAATTGATGATGTCGCCAAGCAGGAAAACGACAACAGTTTGGATGTATTTCTGAAATGGCCCAATTTGAATCAGACAAATAAAGATTTACAATCTTAA
Protein Sequence: MDNIQPPLLLYLKNTAGEDVALEIRSEDDFQTFLDKAKSLLGFDIDINSITRNQPVSLQDNVYEFLENEQNSTVGLQPIIDPLLEPTNEDTGLVYVLDDGTQINASQIHFDNDEPPVDLTLEKLPFVKYSDAIDEDSEPEYTDVRKINIVESPVSHWLSDSSSSKCDFGNTLPFKIVCNNTSGFEAQFTKYLEEATKPSAVVTGVTEDLTQYDDEKKERDFSAFTREEVINMFKDSPVNSLPYDKSNFNERKHIRKTDPLRPIPKNWTPKPITYLDVDGTLIGQNECQDCYICGIFIENSFEKLYLFDNEDQRLHRSSSQKKLYTQLKILCQKCLDENFKPCFSKNPNQPLNSDEVLIIKNNQQYIYQVIGDIKGLGLAKSEQKIDDEIFEGMEFSKLKIGPKCEIITGSLDNDDQHSDDVVIVKDEGSSDVEIIEEPEIDDIENLEEADEEVKEFLGKCERDDNGESKEMKCRFCERAFISLEEVIEHGNEHKHETDDGEVYPCPLCNYGYANFKWLRAHLKAAHDVTKEIKQEENTKNDEETKENIKNEETKSPVSKECCSPIAKRTRSANKNKNTVRQKEEKEEEKNDPPKGESRQELDTKEAVEPCVMKTEMKQEALDSSDEESIWIVHTADEGGAAQLEKFFCKKEPRKSQNNGFKRMIRCPTCNEIYCETDPPHTCSRRGRKRKVVSDCSEIFVPTEEDFIKRAQGRPRRKDECDNLLVPRVQKRKNKEPTSDPQVVTCHNCNMSFTSKVRLKFHMQFHDPTAMLTDEGAYACTECKDATFATETELFDHIHFQHSKQRRWQCPVEDCKKMFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICMKQLTRRSRLRMHLRAHEEELSPTLVLVCAVCSRAFRDHQDAQEHATKSSECIEMFANELKEEEESLTSVQLSPTSGLVTSNTNFKEPSRFTNPIPRQVADQIGEKLLSQLPDEAKNIIRVVEIEKAFRCEYCEDVFYTEGGLNKHRIIHKGVKNPFVCHVCKVSFATYSRCTTHKTTHGFYKRSMADVKTKEANQSASSTGIVGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENLLYKCNECDVTFPNSWSIAYHKKKVHSNAIDGVGTTKTPIHFYRIQCRDCDEVLPNKIALYQHRKKEHSDSSLAFDCTQVRRIRKLTVVTDSVFLENYDFEHDKLRGFFWERIFFPLHYQRGLWPFCHFVNSSQNVSIAYTCRPITVNGDDDNDDDDDDDDDDDDDDDDDDFDDLYCMFYRRFVVRQCSTSEHIHSLFSFNEDMWEVHGNELQTCTICCKWFPSREELQCHVRSHALRPYTCSQCGHSFRTASMRSEHLRTHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRPWACPRCPKKFRIRSDLRTHLRLKHPAYLAVIEMPTENPNEEEIIEQLHLNNIALQKVISISKISFEQGSDSIVPNSARALSLVGVSRTPIILSRRPPEKIDEFQAVRRGRGIAKNPRRPKMLQQSATESQQDNVYPIDDVAKQENDNSLDVFLKWPNLNQTNKDLQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01388850;
90% Identity: -
80% Identity: -