Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020001038.1:43681-50236[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00047 0.029 15.2 0.0 2 23 34 56 33 56 0.92

2 15 1.4 86 4.3 1.9 2 23 126 147 125 147 0.95

3 15 1.4e-05 0.00087 20.0 0.9 1 23 151 174 151 174 0.96

4 15 0.041 2.6 9.1 0.4 3 20 181 198 180 200 0.94

5 15 0.084 5.2 8.1 0.8 3 23 209 230 207 230 0.90

6 15 0.014 0.87 10.5 1.3 1 23 237 260 237 260 0.95

7 15 1.8 1.1e+02 3.9 0.4 3 23 299 320 297 320 0.90

8 15 0.36 22 6.1 1.1 2 23 390 411 389 411 0.96

9 15 9.1e-05 0.0057 17.4 0.6 1 23 415 438 415 438 0.97

10 15 0.022 1.4 9.9 1.6 1 22 443 464 443 464 0.92

11 15 0.037 2.3 9.2 4.5 1 23 471 494 471 494 0.92

12 15 0.13 8.1 7.5 1.6 1 23 501 524 501 524 0.94

13 15 0.00055 0.034 15.0 0.7 2 23 530 551 529 551 0.96

14 15 8.6e-06 0.00054 20.7 0.3 1 19 557 575 557 579 0.96

15 15 0.0065 0.4 11.6 0.5 1 23 585 608 585 608 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00047	0.029	15.2	0.0	2	23	34	56	33	56	0.92
2	15	1.4	86	4.3	1.9	2	23	126	147	125	147	0.95
3	15	1.4e-05	0.00087	20.0	0.9	1	23	151	174	151	174	0.96
4	15	0.041	2.6	9.1	0.4	3	20	181	198	180	200	0.94
5	15	0.084	5.2	8.1	0.8	3	23	209	230	207	230	0.90
6	15	0.014	0.87	10.5	1.3	1	23	237	260	237	260	0.95
7	15	1.8	1.1e+02	3.9	0.4	3	23	299	320	297	320	0.90
8	15	0.36	22	6.1	1.1	2	23	390	411	389	411	0.96
9	15	9.1e-05	0.0057	17.4	0.6	1	23	415	438	415	438	0.97
10	15	0.022	1.4	9.9	1.6	1	22	443	464	443	464	0.92
11	15	0.037	2.3	9.2	4.5	1	23	471	494	471	494	0.92
12	15	0.13	8.1	7.5	1.6	1	23	501	524	501	524	0.94
13	15	0.00055	0.034	15.0	0.7	2	23	530	551	529	551	0.96
14	15	8.6e-06	0.00054	20.7	0.3	1	19	557	575	557	579	0.96
15	15	0.0065	0.4	11.6	0.5	1	23	585	608	585	608	0.92

Sequence Information

Coding Sequence: ATGCATAAACTCGATGACTATGTGGTCGCGAAACGGAACGCCGAGATAATCGTGGAATACGCGACAGCGTACCCGTTCAGGCTCCCAGAAGAGTCCCTGGTGTGCGTTTACTGCGGTGAGAGTTACGATGAACCGTCCGAATACAGAAAACATATGGACGCGGACCACAAAAAGTTTAAAGTACGCTTGGCTTTCCTACATATAAGCGAAGGTTATATTAAGGCGGATTGCACGGATCTAAGGTGTAGAATATGTTGGGTCTCCATGGAGAATCTCGAGGAGACGGCCAAGCATTTGGTCAACGTTCACAATCGTAAAATTGATCTTAACGTCGATTTAGGACTTCAACCGTTCATGTTCGACAATGACAAGACAACGTGTTACATTTGCGGCGCAAGATCGCCGTGTCTCCGCCAATTGAGTAGGCACACCCAAACACACTTCCTGAAATATACGTGCGAATCGTGCGGTAAATCTTACGCGACAATATCCACCCTCCGTAATCATTTAAGGTTTTCGCATACAAACCAGGAACGGATCTGTAGGAAATGTAGGAAGACCTTCCCCAGTCTAGAGGAGAGGAGGCGACATCTAACGGAGTCTGAGAAATGTTGGTCTCACTTGTGCAGCATGTGTTCAGAGAGGTTTGTGTCGTGGACCTCCAAGCAAATTCATTTGACCGAAGCCCACAATGTTCCAAAGAAGACATACGTTTGTCCGGAGTGCAGAGAAGTGTTTTTCGAGAGGAAAAAATATAGAGTGCATTTTAAGTTGCAGCACACGAACGAGGTTTATACGTCCAATCCGGCGCAGTCGGACGATCGTCGTAACACAGAGATTATTGTAGCGAACACGACAGCTTATCCGTTCCGATTGCCTGAAGAAAGAATGATGTGCGTCTACTGTTGCGAGGAATATGCGGAAAGTGCTGAGTTCAGGAAGCACATGGAGGATGAACACCAAGTGTTCAAATTGTATATGGCGTTTACTCATCTTCCTGACGGGATTGGTATGAAGGTTGACATCACTGATCTCCGATGTAGACTGTGTCAGATTCCCCACGAGACCCTAGAGGGGATCGCTGTGCATCTAAACGAATATCACGATTGCGATTTGAATCTGAACAGCGATCTGAGCTTACAGCCGTTTAAGTTAGGGAAGAGGATGTCTTGCGCCATCTGTAGCCTCCCGTTTCCATGTCTGCGGTCGTTGAGTCGTCACACACAGACGCATTTCCTCAAGTACACGTGCGAATCATGCGGCAAATCTTACTCAACAATCACATCTTTGCAAGGGCACGTAAGATATTCGCACATTAAAGGCAAATACTTATGCAGGAAGTGTAAAAAGACGTTCAGCACGATAAACGATAGACGGGAACATCTCAAGACGTCTACGCGGTGCTGTCAGCATTGCTGTTTCACTTGCAACAAACGTTTCGCGACGTGGAATTTAAAACTGAAGCACATGGAAGAGGTTCACGGCAAACCTAGGAGAAGTTATCCATGCATTGAATGCGATATGGTTTTTAAGACTCGCGACACTTGTAGGGTGCATTTCAAGACCGTTCATACTGAGGATCACGTGACCTGCACAGTTTGCTCCCGAAAGTTTGATACGGAGCAGAAAttgagtaaacatatggtcgtacatacgggcgataaaaagtttgtgtgcgaggtctgcaacaagtcttttccgaggaaagctaatttacgtcagcattcgtggattcatagcgatgtgaagagattcgcgtgcggtccatgCAATAAGCAATTTGCTCAACGCATCAGCTGGCGTACGCACATGAAATCCTACCACCCAGAGTGGTCTAAAGAATATTAG
Protein Sequence: MHKLDDYVVAKRNAEIIVEYATAYPFRLPEESLVCVYCGESYDEPSEYRKHMDADHKKFKVRLAFLHISEGYIKADCTDLRCRICWVSMENLEETAKHLVNVHNRKIDLNVDLGLQPFMFDNDKTTCYICGARSPCLRQLSRHTQTHFLKYTCESCGKSYATISTLRNHLRFSHTNQERICRKCRKTFPSLEERRRHLTESEKCWSHLCSMCSERFVSWTSKQIHLTEAHNVPKKTYVCPECREVFFERKKYRVHFKLQHTNEVYTSNPAQSDDRRNTEIIVANTTAYPFRLPEERMMCVYCCEEYAESAEFRKHMEDEHQVFKLYMAFTHLPDGIGMKVDITDLRCRLCQIPHETLEGIAVHLNEYHDCDLNLNSDLSLQPFKLGKRMSCAICSLPFPCLRSLSRHTQTHFLKYTCESCGKSYSTITSLQGHVRYSHIKGKYLCRKCKKTFSTINDRREHLKTSTRCCQHCCFTCNKRFATWNLKLKHMEEVHGKPRRSYPCIECDMVFKTRDTCRVHFKTVHTEDHVTCTVCSRKFDTEQKLSKHMVVHTGDKKFVCEVCNKSFPRKANLRQHSWIHSDVKRFACGPCNKQFAQRISWRTHMKSYHPEWSKEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01387882;
90% Identity: iTF_01387882;
80% Identity: -