Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020001589.1:166333-170113[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00018 0.011 16.5 1.9 1 23 204 226 204 226 0.99

2 11 6.6e-06 0.00041 21.0 0.9 1 23 232 255 232 255 0.97

3 11 7.5e-06 0.00047 20.8 0.9 1 23 261 283 261 283 0.98

4 11 7e-06 0.00043 20.9 0.3 1 23 289 312 289 312 0.94

5 11 2.1e-06 0.00013 22.6 2.6 1 22 318 339 318 340 0.92

6 11 1.5e-06 9.6e-05 23.0 2.5 1 23 346 368 346 368 0.98

7 11 0.0056 0.35 11.8 2.8 1 23 374 397 374 397 0.87

8 11 9.3e-06 0.00058 20.5 2.0 2 23 408 430 407 430 0.94

9 11 2.3e-06 0.00015 22.4 1.3 2 23 441 463 440 463 0.93

10 11 2e-05 0.0012 19.5 3.1 3 23 473 494 471 494 0.96

11 11 8.6e-05 0.0054 17.5 0.9 2 23 500 522 500 522 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00018	0.011	16.5	1.9	1	23	204	226	204	226	0.99
2	11	6.6e-06	0.00041	21.0	0.9	1	23	232	255	232	255	0.97
3	11	7.5e-06	0.00047	20.8	0.9	1	23	261	283	261	283	0.98
4	11	7e-06	0.00043	20.9	0.3	1	23	289	312	289	312	0.94
5	11	2.1e-06	0.00013	22.6	2.6	1	22	318	339	318	340	0.92
6	11	1.5e-06	9.6e-05	23.0	2.5	1	23	346	368	346	368	0.98
7	11	0.0056	0.35	11.8	2.8	1	23	374	397	374	397	0.87
8	11	9.3e-06	0.00058	20.5	2.0	2	23	408	430	407	430	0.94
9	11	2.3e-06	0.00015	22.4	1.3	2	23	441	463	440	463	0.93
10	11	2e-05	0.0012	19.5	3.1	3	23	473	494	471	494	0.96
11	11	8.6e-05	0.0054	17.5	0.9	2	23	500	522	500	522	0.94

Sequence Information

Coding Sequence: ATGGCTGAAACATTGAACCCAACCCACTTTTGTAGATGTTGTCACAAGAATGGTTATTTCAAGTGTCTATTTTCTGACTCCATTTACGAGAATGAGATTGAAAATTATTCGCAGATGTTGTACTATACATTCGGAATCTCATTTGAACCGTCAAAACATGATGATATATTTACAATATGCGATGATTGTATTGAAACACTACGTATATCAAGGGAATTCAAGATTGGTGTCCTTGCTCACGGAGTAAATATTAAAAGGGAACCATTAAATGAAATTGATGAAACATTTCAAATGGGAAACATGTTGAAAAATGCATACAGCAATGAAGATTACGATGAAAGGATCAAAACAACATTAAAATACGTCACCTTCACAGAAGGACCTTCAATAGAACAAGACACAAAAGTTAAAAGAGAAAAGACCACCAACGATGAAGACTTGGATATAAAAAAGGATTTAGACAAAGGTTCCAATCAAGGTGACAAAGTTGAAGAGAGTGAAAACGAATCAGATTTTAGTGAATCTGAAGTCAGTACAATACGCAATAGAGATTATAAGAGCAAAGGTAAAATGCTCGGTGAAGAAATGTTGCACATAGATGAGAAAAAGTTTAAATGTTCAATATGCAATAGCCTTTTTACACTGAGCAGAAGTTTGAAGATTCACATGAAAACGCACACGGACAGAAAACCGTACGAATGCCAAGAGTGTGGAAAGAAATTCAAAATAAAAGGCTACTTATTGAAACATCTGAAAAACATTCACACGGATGTAAAAAAGTACAATTGTCGGTATTGCGATAAAAGTATTTCCTCAAAACAGAATTTGATCGCACACGAAAGGACACATGTGGGTGTAAAACCGTATGTGTGTGATAAGTGTGATAAATCGTTTAGTAGTAAAGGTGGTTTAGTGAATCATAGTATTAAAGTGCATGAGAAAAAGAATTTTTACAAGTGTAAAGTGTGCGATAAAGATTTTAAAACAAAAGAAAATTTCAAAAGACACATTTGGACACATACGGGCATAAAATCATTCCAATGCAGTGTGTGCAACATGAGTTTTGTACATAAAGATTATCTGAGTAAACACATGAACATTCATAAAGACGAAAGAGCGTACAAGTGCGACATATGTAAGAAAACTTTTAAATACAAGAAGATCATACACCAGCACATGTCTGCTGTACATTTGGGCTTGAAGCGAACACGCACTGCCAACAAATGCGACATTTGCAAGAAGACATTTAAATACAAACAGAGTTTAAGCAGGCACATGTCGGATGTACATTTGGGCTTGAAGCAAACACGCAATGCCACCGAGTGCGACATATGTAAGAAAACATTTAAATACAAACAGAGTTTAAGAAGGCACATGTCGGCTGTACATTTGGGCGTTAAGCCAACACCCACAGACTGCGACATTTGCAAGAAGACATTTAAACACAAACAGAGTTTAAGCAACCACATGTCATCTGTACACTTGGGCTTGATGCCTCAGTGCGACATATGTAAGAAGGCATTTAAATACAAAAAGAGTGTAAGCAGGCACATGTCGGCTGTACATTTGCGCTTGAAGCCTTAG
Protein Sequence: MAETLNPTHFCRCCHKNGYFKCLFSDSIYENEIENYSQMLYYTFGISFEPSKHDDIFTICDDCIETLRISREFKIGVLAHGVNIKREPLNEIDETFQMGNMLKNAYSNEDYDERIKTTLKYVTFTEGPSIEQDTKVKREKTTNDEDLDIKKDLDKGSNQGDKVEESENESDFSESEVSTIRNRDYKSKGKMLGEEMLHIDEKKFKCSICNSLFTLSRSLKIHMKTHTDRKPYECQECGKKFKIKGYLLKHLKNIHTDVKKYNCRYCDKSISSKQNLIAHERTHVGVKPYVCDKCDKSFSSKGGLVNHSIKVHEKKNFYKCKVCDKDFKTKENFKRHIWTHTGIKSFQCSVCNMSFVHKDYLSKHMNIHKDERAYKCDICKKTFKYKKIIHQHMSAVHLGLKRTRTANKCDICKKTFKYKQSLSRHMSDVHLGLKQTRNATECDICKKTFKYKQSLRRHMSAVHLGVKPTPTDCDICKKTFKHKQSLSNHMSSVHLGLMPQCDICKKAFKYKKSVSRHMSAVHLRLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386015;
90% Identity: iTF_01386015;
80% Identity: iTF_01386015;