Sand018924.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- -
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020001589.1:166333-170113[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.16 75 3.8 1.5 12 29 199 216 195 230 0.72 2 10 0.63 2.9e+02 2.0 3.5 12 43 227 255 218 256 0.74 3 10 0.00073 0.34 11.4 3.6 5 38 249 279 246 283 0.86 4 10 0.51 2.4e+02 2.2 0.6 18 31 290 303 287 312 0.81 5 10 0.0004 0.18 12.2 2.6 5 41 306 339 304 341 0.91 6 10 0.032 15 6.1 4.5 5 29 363 386 355 397 0.79 7 10 0.00023 0.11 13.0 3.6 11 43 401 430 389 431 0.82 8 10 0.00032 0.15 12.5 0.8 13 43 436 463 432 464 0.87 9 10 0.013 5.8 7.4 0.4 18 43 472 494 467 495 0.85 10 10 0.0089 4.1 7.9 0.2 18 39 500 518 497 524 0.77
Sequence Information
- Coding Sequence
- ATGGCTGAAACATTGAACCCAACCCACTTTTGTAGATGTTGTCACAAGAATGGTTATTTCAAGTGTCTATTTTCTGACTCCATTTACGAGAATGAGATTGAAAATTATTCGCAGATGTTGTACTATACATTCGGAATCTCATTTGAACCGTCAAAACATGATGATATATTTACAATATGCGATGATTGTATTGAAACACTACGTATATCAAGGGAATTCAAGATTGGTGTCCTTGCTCACGGAGTAAATATTAAAAGGGAACCATTAAATGAAATTGATGAAACATTTCAAATGGGAAACATGTTGAAAAATGCATACAGCAATGAAGATTACGATGAAAGGATCAAAACAACATTAAAATACGTCACCTTCACAGAAGGACCTTCAATAGAACAAGACACAAAAGTTAAAAGAGAAAAGACCACCAACGATGAAGACTTGGATATAAAAAAGGATTTAGACAAAGGTTCCAATCAAGGTGACAAAGTTGAAGAGAGTGAAAACGAATCAGATTTTAGTGAATCTGAAGTCAGTACAATACGCAATAGAGATTATAAGAGCAAAGGTAAAATGCTCGGTGAAGAAATGTTGCACATAGATGAGAAAAAGTTTAAATGTTCAATATGCAATAGCCTTTTTACACTGAGCAGAAGTTTGAAGATTCACATGAAAACGCACACGGACAGAAAACCGTACGAATGCCAAGAGTGTGGAAAGAAATTCAAAATAAAAGGCTACTTATTGAAACATCTGAAAAACATTCACACGGATGTAAAAAAGTACAATTGTCGGTATTGCGATAAAAGTATTTCCTCAAAACAGAATTTGATCGCACACGAAAGGACACATGTGGGTGTAAAACCGTATGTGTGTGATAAGTGTGATAAATCGTTTAGTAGTAAAGGTGGTTTAGTGAATCATAGTATTAAAGTGCATGAGAAAAAGAATTTTTACAAGTGTAAAGTGTGCGATAAAGATTTTAAAACAAAAGAAAATTTCAAAAGACACATTTGGACACATACGGGCATAAAATCATTCCAATGCAGTGTGTGCAACATGAGTTTTGTACATAAAGATTATCTGAGTAAACACATGAACATTCATAAAGACGAAAGAGCGTACAAGTGCGACATATGTAAGAAAACTTTTAAATACAAGAAGATCATACACCAGCACATGTCTGCTGTACATTTGGGCTTGAAGCGAACACGCACTGCCAACAAATGCGACATTTGCAAGAAGACATTTAAATACAAACAGAGTTTAAGCAGGCACATGTCGGATGTACATTTGGGCTTGAAGCAAACACGCAATGCCACCGAGTGCGACATATGTAAGAAAACATTTAAATACAAACAGAGTTTAAGAAGGCACATGTCGGCTGTACATTTGGGCGTTAAGCCAACACCCACAGACTGCGACATTTGCAAGAAGACATTTAAACACAAACAGAGTTTAAGCAACCACATGTCATCTGTACACTTGGGCTTGATGCCTCAGTGCGACATATGTAAGAAGGCATTTAAATACAAAAAGAGTGTAAGCAGGCACATGTCGGCTGTACATTTGCGCTTGAAGCCTTAG
- Protein Sequence
- MAETLNPTHFCRCCHKNGYFKCLFSDSIYENEIENYSQMLYYTFGISFEPSKHDDIFTICDDCIETLRISREFKIGVLAHGVNIKREPLNEIDETFQMGNMLKNAYSNEDYDERIKTTLKYVTFTEGPSIEQDTKVKREKTTNDEDLDIKKDLDKGSNQGDKVEESENESDFSESEVSTIRNRDYKSKGKMLGEEMLHIDEKKFKCSICNSLFTLSRSLKIHMKTHTDRKPYECQECGKKFKIKGYLLKHLKNIHTDVKKYNCRYCDKSISSKQNLIAHERTHVGVKPYVCDKCDKSFSSKGGLVNHSIKVHEKKNFYKCKVCDKDFKTKENFKRHIWTHTGIKSFQCSVCNMSFVHKDYLSKHMNIHKDERAYKCDICKKTFKYKKIIHQHMSAVHLGLKRTRTANKCDICKKTFKYKQSLSRHMSDVHLGLKQTRNATECDICKKTFKYKQSLRRHMSAVHLGVKPTPTDCDICKKTFKHKQSLSNHMSSVHLGLMPQCDICKKAFKYKKSVSRHMSAVHLRLKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386043;
- 90% Identity
- iTF_01386043;
- 80% Identity
- iTF_01386043;