Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000232.1:78348-84150[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.1e-08 1.3e-06 28.9 2.5 2 23 166 187 165 187 0.98

2 12 0.98 61 4.7 0.3 8 23 191 207 190 207 0.92

3 12 0.0003 0.019 15.8 2.8 2 23 216 238 215 238 0.90

4 12 3e-06 0.00018 22.1 0.8 1 23 243 265 243 265 0.98

5 12 0.00096 0.06 14.2 0.7 1 23 270 293 270 293 0.88

6 12 3e-06 0.00018 22.1 0.8 1 23 298 320 298 320 0.98

7 12 0.0003 0.018 15.8 3.4 2 23 329 351 328 351 0.91

8 12 1.4e-05 0.00088 20.0 2.9 1 23 356 379 356 379 0.97

9 12 3.5e-05 0.0022 18.7 0.2 2 23 388 410 387 410 0.94

10 12 4.5e-05 0.0028 18.4 0.7 2 23 416 438 415 438 0.93

11 12 2.7e-07 1.7e-05 25.4 0.9 1 23 443 466 443 466 0.95

12 12 2.1e-05 0.0013 19.4 1.8 2 23 475 497 474 497 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.1e-08	1.3e-06	28.9	2.5	2	23	166	187	165	187	0.98
2	12	0.98	61	4.7	0.3	8	23	191	207	190	207	0.92
3	12	0.0003	0.019	15.8	2.8	2	23	216	238	215	238	0.90
4	12	3e-06	0.00018	22.1	0.8	1	23	243	265	243	265	0.98
5	12	0.00096	0.06	14.2	0.7	1	23	270	293	270	293	0.88
6	12	3e-06	0.00018	22.1	0.8	1	23	298	320	298	320	0.98
7	12	0.0003	0.018	15.8	3.4	2	23	329	351	328	351	0.91
8	12	1.4e-05	0.00088	20.0	2.9	1	23	356	379	356	379	0.97
9	12	3.5e-05	0.0022	18.7	0.2	2	23	388	410	387	410	0.94
10	12	4.5e-05	0.0028	18.4	0.7	2	23	416	438	415	438	0.93
11	12	2.7e-07	1.7e-05	25.4	0.9	1	23	443	466	443	466	0.95
12	12	2.1e-05	0.0013	19.4	1.8	2	23	475	497	474	497	0.96

Sequence Information

Coding Sequence: ATGTTGTACGATACATTCGGAATCTTATTTGTACCCTCCATAGATGACAAAATCTACACAATATGCGACGAGTGTATTGAAAAACTACGTATCTCAACGGAATTCAAGAATTGTGTCCTCGCCTGTAAAAAAAATGCTTGTTGGCGGGGGCACTGCCGCGATCCAATTGACGGGGGCACTGCAGTGACCCCAGATGTGAAACAAAAGACTTCTGAAGATGAAGACAGTGACACAGATATAATAAATAAGGTTTTAGAGGAAGAGTCAAATGAAGAGGTGAAAATGGAAGAGATCGGAAACAAGTCGGATGCAACTTTCAGCGAATCTGAAGAATTTACAGTCACCATCGAAGTTAAGACAGAAGAGAGTGTCGATTATGAAGACTCTTGTATAGACAAAGTGTCAGACGAAGATGTCACAATTGAAGAGAGCAGAAAGGAATCGTTGAGTGAATCGGGTGTCAATTTAAGAAACACAAGCGACAAACATGAGAATAAATGCAATATTTGCAATAAAACTTTTAAACGCAAAGGGAACCTAGAAAATCATCTCAGAACTCACGAGCGCTACAAGACATTTAAATCCAAGGCGTATATACGCCAGCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTATGCCAGCACAAGACGGCTGTACATTCGGGCTTAACATTTGAGTGCGACATTTGCAAAAAGACTTTTAAATCCAAGGGGTATATTCGCCAGCACATGGCTGTACATTTGGGCTTAACATTTGAGTGCGACATTTGCAAAAAGACTTTTAAATCGAATGTGATTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTAACATTTGAGTGCGACATTTGCAAAAAGACTTTTAAATCCAAGGGGTATATTCGCCAGCACATGGCTGTACATTTGGGCTTTAATCCAACGCCCACTGAGTGTGAAATCTGCAAGAAGACATTTAATCACAAACAGGGTTTACGCCACCACACGTCGGCTGTACATATGGACTTTACATTTGAATGCGACATTTGTAAGAAGACATTTAAACACAAGGATCGTATACGCAGGCACATGTCGGTTGTACATTTGCGCACTAAGCCAACGCCCACTGAGTGCGGTATTTGTAAAAAGTCTTTTAATTACACAGGTGGTTTACGCCGCCACATGTTAGCTGTACATTTGGGCTTTACTACTGAGTGCGACTTATGTAAGAAGACATTTAAAAACAAGGATGGTATACGCAAGCACATGTCGGCTGTACATTTGGGCTTTACATTTGAGTGCGACATTTGCAAGAAGAAATTTAAATCCAAGGCGAATTTACGCCAGCACATGTCGGCTGTACATTTGCGCACTAAGCCAACGCCCATTGAGTGCGGCATTTGTAAAAAGTCATTTAATTACACAGGTTGTTTACGCCGCCACATGTCGACTGTACATTTGGGCTGA
Protein Sequence: MLYDTFGILFVPSIDDKIYTICDECIEKLRISTEFKNCVLACKKNACWRGHCRDPIDGGTAVTPDVKQKTSEDEDSDTDIINKVLEEESNEEVKMEEIGNKSDATFSESEEFTVTIEVKTEESVDYEDSCIDKVSDEDVTIEESRKESLSESGVNLRNTSDKHENKCNICNKTFKRKGNLENHLRTHERYKTFKSKAYIRQHMSAVHLGFKPTPTECDICKKTFKSKVTLCQHKTAVHSGLTFECDICKKTFKSKGYIRQHMAVHLGLTFECDICKKTFKSNVILRQHKTAVHSGLTFECDICKKTFKSKGYIRQHMAVHLGFNPTPTECEICKKTFNHKQGLRHHTSAVHMDFTFECDICKKTFKHKDRIRRHMSVVHLRTKPTPTECGICKKSFNYTGGLRRHMLAVHLGFTTECDLCKKTFKNKDGIRKHMSAVHLGFTFECDICKKKFKSKANLRQHMSAVHLRTKPTPIECGICKKSFNYTGCLRRHMSTVHLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385997;
90% Identity: iTF_01385997;
80% Identity: iTF_01385997;