Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000067.1:151798-165574[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00026 0.016 16.0 2.6 1 23 206 228 206 228 0.97

2 20 0.022 1.4 9.9 2.1 1 20 234 253 234 256 0.94

3 20 0.00011 0.0066 17.2 2.2 1 23 275 297 275 297 0.98

4 20 2.6e-05 0.0016 19.1 4.4 1 23 303 325 303 325 0.99

5 20 3.3e-05 0.002 18.8 5.3 1 23 331 353 331 353 0.97

6 20 6.3e-06 0.00039 21.1 8.3 1 23 359 381 359 381 0.97

7 20 1.4e-06 9e-05 23.1 2.5 1 23 387 409 387 409 0.97

8 20 9e-05 0.0056 17.4 6.7 1 23 415 437 415 437 0.97

9 20 8.9e-05 0.0055 17.5 6.5 1 23 443 465 443 465 0.97

10 20 4.3e-07 2.7e-05 24.7 1.9 1 23 471 493 471 493 0.98

11 20 4.4e-05 0.0027 18.4 7.9 1 23 499 521 499 521 0.98

12 20 7.3e-06 0.00046 20.9 6.4 1 23 527 549 527 549 0.98

13 20 5.7e-07 3.5e-05 24.4 5.5 1 23 555 577 555 577 0.98

14 20 1.4e-05 0.00086 20.0 7.1 1 23 583 605 583 605 0.97

15 20 5.1e-05 0.0032 18.2 6.2 1 23 611 633 611 633 0.98

16 20 2.7e-06 0.00017 22.2 6.0 1 23 639 661 639 661 0.98

17 20 0.00042 0.026 15.3 8.7 1 23 667 689 667 689 0.97

18 20 1.7e-06 0.0001 22.9 5.2 1 23 695 717 695 717 0.97

19 20 0.00035 0.022 15.6 0.1 1 23 724 746 724 746 0.97

20 20 0.0005 0.031 15.1 3.1 1 23 756 778 756 778 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00026	0.016	16.0	2.6	1	23	206	228	206	228	0.97
2	20	0.022	1.4	9.9	2.1	1	20	234	253	234	256	0.94
3	20	0.00011	0.0066	17.2	2.2	1	23	275	297	275	297	0.98
4	20	2.6e-05	0.0016	19.1	4.4	1	23	303	325	303	325	0.99
5	20	3.3e-05	0.002	18.8	5.3	1	23	331	353	331	353	0.97
6	20	6.3e-06	0.00039	21.1	8.3	1	23	359	381	359	381	0.97
7	20	1.4e-06	9e-05	23.1	2.5	1	23	387	409	387	409	0.97
8	20	9e-05	0.0056	17.4	6.7	1	23	415	437	415	437	0.97
9	20	8.9e-05	0.0055	17.5	6.5	1	23	443	465	443	465	0.97
10	20	4.3e-07	2.7e-05	24.7	1.9	1	23	471	493	471	493	0.98
11	20	4.4e-05	0.0027	18.4	7.9	1	23	499	521	499	521	0.98
12	20	7.3e-06	0.00046	20.9	6.4	1	23	527	549	527	549	0.98
13	20	5.7e-07	3.5e-05	24.4	5.5	1	23	555	577	555	577	0.98
14	20	1.4e-05	0.00086	20.0	7.1	1	23	583	605	583	605	0.97
15	20	5.1e-05	0.0032	18.2	6.2	1	23	611	633	611	633	0.98
16	20	2.7e-06	0.00017	22.2	6.0	1	23	639	661	639	661	0.98
17	20	0.00042	0.026	15.3	8.7	1	23	667	689	667	689	0.97
18	20	1.7e-06	0.0001	22.9	5.2	1	23	695	717	695	717	0.97
19	20	0.00035	0.022	15.6	0.1	1	23	724	746	724	746	0.97
20	20	0.0005	0.031	15.1	3.1	1	23	756	778	756	778	0.99

Sequence Information

Coding Sequence: ATCCAATTGACGGTCAGTGAGGACGGAATTGTCACTGTGGTCGAACCTGGTGGTAGTAACAAACTGGTGGACAAGGAGGAACTACATGAGGCCATAAAGATGCCGTCCGATCACACCCTTACCGTTCACCAGTTGCAGCAAATTGTCGGACAACAGGTGTTAGACAGTGTGGTACGGATTGAACAGGCCACAGGTGAACCGGCCAACATTCTCGTCACCCACAACCCGGACGGCACAACCTCCATAGAAGCCAGCGCCAGCGATCCGCTCATTGTGAAGGACGAGAAAGCGTCCAACAAAATCGAGACTGCACAGTTCGCTATACCAGCGGAAATTAAGGACATCAAAGGCATTGATTTGAAGAGTGTGGGAACAATGGGCATGGAGGGAGCCGTAGTGAAGATATCTGCGGGTGCTTCTGAACATGACTTTCACCAAATGTACAAAGTGAACGTGGAGGACTTGTCTCAGTTGCTAGCGTACCACGAAGTGTTTGGAAAACTTAACTCCGAGGGACAGCAGCAGGCCAAGGTGATGGAAGGCATTGAGGTGGAAGTGCCTCCACCTTCCACAAGCGCGGCGATATCGGAAACAGAGTCCTCCTCGCCGGGACACCACTCGTGCGACCTCTGTGGGAAAATATTCCAGTTCAGATATCAACTCATTGTTCATAGGCGTTACCATGGAGAACGCAAACCGTTCACGTGCCAAGTGTGCGGCTCGGCGTTCGCTAATCATGTCGAACTATCCAGACATGGGAAATGTCATCTAGCGGGAGATGCGGCCGAACGTCACGCTAAAAGGGTGCCACAGGATAAGCCGTACGTTTGCGCTACTTGCCTCAAAACTTTCGCAAGGAAGGAGCATCTCGACAACCACACTCGCAGTCACACAGGGGAGACGCCGTACAGATGCCAGTATTGTGCGAAATCGTTCACCCGAAAAGAACACATGGTGAACCACGTACGGAAACACACGGGCGAAACGCCTCATCGCTGCGACATATGCAAGAAGTCTTTCACGCGCAAGGAGCACTTCATGAACCATGTCATGTGGCACACGGGTGAAACGCCGCACCATTGCCAAATATGTGGCAAGAAGTACACTAGGAAGGAGCATTTAACGAACCATATGCGCTCGCACACGAACGATACGCCCTTCCGATGTGCGATGTGCGGCAAGTCATTCACCCGAAAGGAACATTACACCAACCACATACTGTGGCACACCGGTGAGACGCCCCACCGCTGCGATTTCTGCTCGAAGACGTTCACCCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACGGGCGAATCGCCCCATCGCTGCAACTTCTGCTCCAAGTCCTTTACGCGCCGCGAACACCTCGTCAACCACGTGCGTCAACACACGGGCGAAACGCCCTTCCAGTGCGGCTACTGTCCTAAGGCTTTCACCAGGAAGGATCACTTGGTGAATCACGTGCGTCAGCACACCGGCGAGTCACCGCACAAGTGCTCATTCTGCACGAAATCTTTCACGCGCAAAGAACACCTAACGAACCACGTGCGACAGCACACAGGCGAATCACCCCACCGGTGTTCGTACTGTGCCAAATCGTTCACCAGGAAGGAGCATTTAACCAATCACATCAGACAACACACGGGCGAAACTCCGCACAAGTGTACATACTGTCCGAAGGCGTTCTCCCGTAAGGAGCATCTCACCAACCATATCCGGCAGCACACCGGCGACTCTCCGCACGTGTGCTCCTACTGTCAGAAGTGCTTCTCGCGCAAGGAGCACCTCGTCATACACATAAGGCAACATACAGGCGAGACGCCCTACAAATGCACGTTTTGTGCGAAGTCATTCTCGCGCAAGGAGCACCTCACAAACCACATCCACCTTCACACGGGAGAGACTCCCCACAAATGCCCCTTCTGCACCAAGACCTTCTCCCGGAAGGAGCATCTCACCAACCACGTCAGAATTCACACAGGGGAATCTCCGCATCGGTGCGAGTTCTGTCAGAAGACCTTCACTCGGAAAGAGCATCTCACGAACCACTTCAAGCAGCACACTGGCAACACACCACACATTTGCAAAGTCTGCTCAAAGTCTTTCACTCGCAAGGAGCATCTTGCTACCCACATGAGGTCTCATAGTTGCGGGGAGCGTCCTTACATTTGTGGTGAATGTGGAAAATCATTCCCACTTAAAGGAAATTTATTGTTCCATGTGCGATCGCACAAGAACACTAATGCAGACAGCAAATTCTTCCAGTGTGATGTTTGCAGTAAAGAATTCTTATCGAAAACTCACCTGGCGAGCCACCGGCGCACGCACGAGGCAGGTGAGGCAGGCGCCGAACTTCCAGACGAAGCGCACTGTGATAATAATTGTGACAAGGAGGAACCCGACACCAAGCAGGAATTAAGGACTGTGGTCACAGAAAATAGCTCTGTTCCCGTCGAAAGCAATGACGTGACGCAAAATCCTCAAGCCAATTCAAACACTGTGATGCAAATTACCAGCCAGGCGGTTCGATCGGCGCCTCCGGCCGCGGTTACTGTGGGCAATGTAAGCAGTGTAGGCAGTGTGGGCAGTGTGGGCGCTGTGCCAGGCGCATTCCCTCACGCGACCGCACCTCAGCACCACACGGGCACCCACCACCCGGTCACAGTCAACTACTAG
Protein Sequence: IQLTVSEDGIVTVVEPGGSNKLVDKEELHEAIKMPSDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLIVKDEKASNKIETAQFAIPAEIKDIKGIDLKSVGTMGMEGAVVKISAGASEHDFHQMYKVNVEDLSQLLAYHEVFGKLNSEGQQQAKVMEGIEVEVPPPSTSAAISETESSSPGHHSCDLCGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANHVELSRHGKCHLAGDAAERHAKRVPQDKPYVCATCLKTFARKEHLDNHTRSHTGETPYRCQYCAKSFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLTNHMRSHTNDTPFRCAMCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPKAFSRKEHLTNHIRQHTGDSPHVCSYCQKCFSRKEHLVIHIRQHTGETPYKCTFCAKSFSRKEHLTNHIHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHFKQHTGNTPHICKVCSKSFTRKEHLATHMRSHSCGERPYICGECGKSFPLKGNLLFHVRSHKNTNADSKFFQCDVCSKEFLSKTHLASHRRTHEAGEAGAELPDEAHCDNNCDKEEPDTKQELRTVVTENSSVPVESNDVTQNPQANSNTVMQITSQAVRSAPPAAVTVGNVSSVGSVGSVGAVPGAFPHATAPQHHTGTHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01387797;
90% Identity: iTF_01387797;
80% Identity: -