Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000232.1:193018-199875[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.00017 0.011 16.6 3.4 2 23 204 225 203 225 0.98

2 22 0.013 0.83 10.6 0.0 1 23 228 250 228 250 0.98

3 22 1.3e-05 0.00083 20.0 0.4 2 23 257 279 256 279 0.95

4 22 0.00039 0.024 15.5 2.5 1 23 285 307 285 307 0.98

5 22 1.6e-05 0.001 19.8 4.3 1 23 313 335 313 335 0.95

6 22 0.00025 0.016 16.0 0.5 1 23 341 363 341 363 0.98

7 22 7.8e-06 0.00048 20.8 1.0 1 23 369 391 369 391 0.98

8 22 0.0027 0.17 12.8 2.3 1 23 397 420 397 420 0.94

9 22 4.6e-05 0.0029 18.4 1.1 2 23 429 451 428 451 0.96

10 22 1.6e-06 9.7e-05 23.0 1.0 1 23 456 479 456 479 0.97

11 22 9.3e-05 0.0058 17.4 1.2 2 23 488 510 487 510 0.90

12 22 1.6e-06 9.7e-05 23.0 1.0 1 23 515 538 515 538 0.97

13 22 9.3e-05 0.0058 17.4 1.2 2 23 547 569 546 569 0.90

14 22 1.6e-06 9.7e-05 23.0 1.0 1 23 574 597 574 597 0.97

15 22 9.3e-05 0.0058 17.4 1.2 2 23 606 628 605 628 0.90

16 22 1.6e-06 9.7e-05 23.0 1.0 1 23 633 656 633 656 0.97

17 22 9.3e-05 0.0058 17.4 1.2 2 23 665 687 664 687 0.90

18 22 1.6e-06 9.7e-05 23.0 1.0 1 23 692 715 692 715 0.97

19 22 9.3e-05 0.0058 17.4 1.2 2 23 724 746 723 746 0.90

20 22 1.6e-06 9.7e-05 23.0 1.0 1 23 751 774 751 774 0.97

21 22 9.3e-05 0.0058 17.4 1.2 2 23 783 805 782 805 0.90

22 22 6.7e-06 0.00042 21.0 0.7 1 23 810 833 810 833 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.00017	0.011	16.6	3.4	2	23	204	225	203	225	0.98
2	22	0.013	0.83	10.6	0.0	1	23	228	250	228	250	0.98
3	22	1.3e-05	0.00083	20.0	0.4	2	23	257	279	256	279	0.95
4	22	0.00039	0.024	15.5	2.5	1	23	285	307	285	307	0.98
5	22	1.6e-05	0.001	19.8	4.3	1	23	313	335	313	335	0.95
6	22	0.00025	0.016	16.0	0.5	1	23	341	363	341	363	0.98
7	22	7.8e-06	0.00048	20.8	1.0	1	23	369	391	369	391	0.98
8	22	0.0027	0.17	12.8	2.3	1	23	397	420	397	420	0.94
9	22	4.6e-05	0.0029	18.4	1.1	2	23	429	451	428	451	0.96
10	22	1.6e-06	9.7e-05	23.0	1.0	1	23	456	479	456	479	0.97
11	22	9.3e-05	0.0058	17.4	1.2	2	23	488	510	487	510	0.90
12	22	1.6e-06	9.7e-05	23.0	1.0	1	23	515	538	515	538	0.97
13	22	9.3e-05	0.0058	17.4	1.2	2	23	547	569	546	569	0.90
14	22	1.6e-06	9.7e-05	23.0	1.0	1	23	574	597	574	597	0.97
15	22	9.3e-05	0.0058	17.4	1.2	2	23	606	628	605	628	0.90
16	22	1.6e-06	9.7e-05	23.0	1.0	1	23	633	656	633	656	0.97
17	22	9.3e-05	0.0058	17.4	1.2	2	23	665	687	664	687	0.90
18	22	1.6e-06	9.7e-05	23.0	1.0	1	23	692	715	692	715	0.97
19	22	9.3e-05	0.0058	17.4	1.2	2	23	724	746	723	746	0.90
20	22	1.6e-06	9.7e-05	23.0	1.0	1	23	751	774	751	774	0.97
21	22	9.3e-05	0.0058	17.4	1.2	2	23	783	805	782	805	0.90
22	22	6.7e-06	0.00042	21.0	0.7	1	23	810	833	810	833	0.94

Sequence Information

Coding Sequence: ATGGCTGAAACATTGAACCCAATATCTTTTTGTAGATGTTGTCACAAGAATGGTGATTTCAAGTGTCTATTTTCCAACTTCATTTACGAGAATGAAATTGAGAATTATTCGCAGATGTTGTACGATACATTCGGAATCTTATTTGTACCCTCGATAGATGACGAAATCTATACAATATGCGACGAGTGTATTGAAAAACTACGTATCTCAACGGAATTCAAGAATTGTGTCCTCGCCTGTAAAAAAAATGCTTGTTGGCGGGGGCACTGCTGCGCTCCACTTGACGGGGGCACTGCAGTGACCCCAGATGTGAAACAAAAGACCTCCGAAGATGAAGTCAGTGACACGGATATGATAAATAAGGCATTAGAGGAAGAGTTAAATGAAGAGGTGAAAGTGGAAGAGAGCGGAGACAAATCGGACGAAACTTTCAGCGAATGTGAAGAATTTACAATCGACATCGATGTTAAGACAGAAGAGAGTGTCGAAGATAAAGACTCTTGTACAGACAAAGTGTTAGACAAAGATGTCACAATTGAAGAGAGCAGAAAAGAATCGTCGAGTGAATCGGGTGTCAATTTAAGAAACACAAGCGACAAACATGAGAATAAATGCAATATTTGCAATAAAACTTTTGAATGCAAAGGGAACCTAGAAAATCATCTTAGAAGTCACGAGGGATATAAATGCCAAATATGTCCAGAAATATTGTCGAATCAGATAGAGTACGATGAACACATAGAAATACACCTGGGTGGAATAATAATCGAGTGCAAAGAGTGCAGTCGAACATTCGCAACCAATGGAAACTTGCTGAGGCATTATCAAAACGTGCACATGGGTATGAAAAATTATAGTTGCCAGTATTGCGATAAAAGAATGTCGACGAGAGAGCATTTGGTCCAACACGAAAGGATACACACGGGTGTAAAACCGTATGTGTGCAAAAAATGCAATAAAGCGTTTAGTACAAAAGGGCACTTACATCGACATAATGCAGTGCATTCGGCACTTAAGCCTTACATTTGTAACGTGTGTGATATAAGATTCAAAAGTAAAATCGGTTACCGAGGGCACATGCTGAAGCATACAGGGATAAAACGTTTCCAATGCGGTGTCTGTAGCAAGACTTTTATGTTTAAATATAATCTCAATAGCCACATGGCGGTCCATAATCGCGAAAGATCCTACGAGTGCAACATTTGTAAAAAAAATTATAAATCGAAGAACATCTTACACAAGCATATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGATATTTGCAAAAAGATTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGAAGGTTGTACATTCGGGATTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATATAAGGCGAATATACGCCGCCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATATAAGGCGAATATACGCCGCCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATATAAGGCGAATATACGCCGCCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATATAAGGCGAATATACGCCGCCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATATAAGGCGAATATACGCCGCCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATATAAGGCGAATATACGCCGCCACATGTCGGTTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATCTAAGGCGAATATATACCGCCACATGTCGGCTGTACATTTGGGCTTTAAGGTGGTACCTTGCGCTCCGAACAAACTGCAGCGCGGATAG
Protein Sequence: MAETLNPISFCRCCHKNGDFKCLFSNFIYENEIENYSQMLYDTFGILFVPSIDDEIYTICDECIEKLRISTEFKNCVLACKKNACWRGHCCAPLDGGTAVTPDVKQKTSEDEVSDTDMINKALEEELNEEVKVEESGDKSDETFSECEEFTIDIDVKTEESVEDKDSCTDKVLDKDVTIEESRKESSSESGVNLRNTSDKHENKCNICNKTFECKGNLENHLRSHEGYKCQICPEILSNQIEYDEHIEIHLGGIIIECKECSRTFATNGNLLRHYQNVHMGMKNYSCQYCDKRMSTREHLVQHERIHTGVKPYVCKKCNKAFSTKGHLHRHNAVHSALKPYICNVCDIRFKSKIGYRGHMLKHTGIKRFQCGVCSKTFMFKYNLNSHMAVHNRERSYECNICKKNYKSKNILHKHMSAVHLGFKPTPTECDICKKIFKSKVTLRQHKKVVHSGFTFECDICKKTFKYKANIRRHMSVVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKYKANIRRHMSVVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKYKANIRRHMSVVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKYKANIRRHMSVVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKYKANIRRHMSVVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKYKANIRRHMSVVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKSKANIYRHMSAVHLGFKVVPCAPNKLQRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386384;
90% Identity: iTF_01386384;
80% Identity: iTF_01386384;