Sand013829.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- e2f7
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020000894.1:70227-73559[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-23 8.4e-20 70.6 0.0 1 65 54 120 54 120 0.94 2 3 1.1 5.4e+03 -2.4 0.0 11 29 126 143 125 145 0.75 3 3 1.3e-16 6.2e-13 48.7 0.2 1 64 155 245 155 246 0.88
Sequence Information
- Coding Sequence
- ATGATGTATGAAGATGATAACATAACTAGTACTCCTAAGCGTTGTGCGCTTACTGAGGTCACAAATTCTTCAAGCTATGTGTCACCAACTGCAAATCTCAAGTTATTAACTAATGTTGCCTTGCACTATCCGACACCACCCCCGAGCGCTGTTCACAGAAAAGAAAAGTCTCTTCAAATCCTCTGCGACAGATTTTTAAACCTATACCCTCTTAATGGAAATAGTCCTGTGGAAATGCAACTAGACTCTACTGCAGCCCAGTTAGGTGTAGAAAAACGTCGCATGTATGACATTATTAATATATTAGAAGCTATGAATTGTGTTGTCCATAAACGAAAAAATACTTATCTTTGGCACGGAGGCTCCAGACTGAATTCATTTTTAAAGATGTTAAAAGAAAAGGGGCAAAGTTTGAGATTGTCGGAGGCGTTACGAGGACAAGCACCTAAACCTCCTACACCAAAACATAAAACCCTCGGAGTTATGGCTCAAAGGTTTCTCATGTTATTTTTGGTGGAACCACGTAACACCTTAATCAACCTTGAAATGGCTGTCAAAGTACTCATCGACACATCGAACAAGAACAAAACTGTTCTCTCACCCGAACAACTAGACCGTCAACACAAATCTAAAGTAAGAAGACTGTATGATATAGCCAATGTATTCATTTCCATTGGCCTTATAGAGAAGGTTTCCGGTAATTTAATATTGAAAAAGCCAGTGTTCAGGTATGTTGGTCCGTTTAAACAGAAGAAAGACAAAGAGAAGGCTGTATGTGTGACACCAACGCCCATAACACCCTTGTCGACTTTGGACAGTGATGAGGGAACACCTCCGAGTCACACGTTTGCCTCTAAGTCAAAAAGAAAATTAGAATTCCCTACAACAAATACAAATGAAAAAGTAAAAGTATTTGTCACAGCAAAGCCGCACTCTGTAACGCAAAAATGGGATGAAATACTTTTTGTGGCTGATATGGAACTGACTAGAATTAATAATGAGACTAAAATATATAGAGAAAACATCAATATAAAATAA
- Protein Sequence
- MMYEDDNITSTPKRCALTEVTNSSSYVSPTANLKLLTNVALHYPTPPPSAVHRKEKSLQILCDRFLNLYPLNGNSPVEMQLDSTAAQLGVEKRRMYDIINILEAMNCVVHKRKNTYLWHGGSRLNSFLKMLKEKGQSLRLSEALRGQAPKPPTPKHKTLGVMAQRFLMLFLVEPRNTLINLEMAVKVLIDTSNKNKTVLSPEQLDRQHKSKVRRLYDIANVFISIGLIEKVSGNLILKKPVFRYVGPFKQKKDKEKAVCVTPTPITPLSTLDSDEGTPPSHTFASKSKRKLEFPTTNTNEKVKVFVTAKPHSVTQKWDEILFVADMELTRINNETKIYRENINIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01388258;
- 90% Identity
- iTF_01388258;
- 80% Identity
- -