Sand016980.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- Rel
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020001265.1:2897-17692[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-28 8.1e-25 88.1 0.2 1 168 48 216 48 217 0.85 2 2 1.5 7e+03 -2.8 0.1 100 111 625 636 593 663 0.46
Sequence Information
- Coding Sequence
- ATGTCTGAATATAAAGGTGACTCGAACGACTTCAATGTGGCATTTCTAAGTTCAAATATGGAGTCGTCGCATAATTCACCATCTCAACAAGTACCGCAATTAAAAGACATCTCCAATGAAGATATCACTCTTGATCCATATTTAGAAATTGTCGAACAACCACAGAATCGGTTTAGGTTTAGGTACAGGAGCGAATTAAATGTACCTCATGGCTGCATATTTGGCGAATCATACGTCTCTACCAACATAGAAATACATCCCATGGTACAGCTTTTAAATTATGAAGGGAAAGCAACTATAAGATGCGGTCTTGCTCAAATCGATAACGATGAAGATCATCCTCATAAAATAACAGAACGCGACCAATATGAACGAATAAGTGCTATAGTACCAGAAAAAGGCAGCTATCGAGTAGCATTTCCCGGCCTAACTATTATACACACACCTAGGAGAGACGTAGAAAATTTATTAGCAAAAGCATATTGCAGAGATAAAAACATTAAAAATGTCACCCCAGAGATTCGTAGGCAGTGCAAAATTGACGCTAAAAGGATCAATTTAAACATTGTTCGATTGAAGTTTAGCGCGCACGACGTTAATACTGGCGCGGAAATATGCCCACCAGCTTTTTCCCAAACTATAAACAATTTGAAAAGTGCCGCTACAAATAATTTAAGAATTTGTCGCATGAGCAGAATGTATGGCAGCCCCCGCGGAGGTGACGACGTATTCATATTCGTTGAGAAAGTTAGCAGAAATGATATTCAAGTTAGATTTTTTGAGTTATCTAAGGATGATGAGGAATTATGGAGCGCTAATGGACGTTTCTCGAGATGTGATGTCCATTACCAGTATGGTATGGTATTTAGTACACCGCCGTACTGGGATACGAACATAGCTACAGACGTGACAGTTCACATACAGCTGGTACGACCGTCAGATGACAGTGTTAGCAACTTAATGGACTTCACCTATAGAGGGACACCGCATTCTATTAATAGAAACCCAGGCACATCTTCAAACTATTCATGGTATGAAGAATACAGGACAGAGTACCGCTATCTTTTTGAGTTGCCTGAAGGCGGAACGGAGACGGTCCTAAAGCTGTTTAATGATCTAAAGTATTTAAAAAAACCGATTGAAATTGATGACACACAGTTTATGAAAATCAGAGGAACACTAGAAGGAATTTTTGAAACAACACTGACCAATGGAGAAAAGTTTCTCCACATGATGATGTTGGAAGATCTTCCGTGTTTTTTTAATCACACGATAAAGCTTATCAAGAGCGTGAACTTATCGCACCTTCTTAATCGAGGAAACGACCGAGGGCAGACAATACTCCATTTGACTACCTTCAACAATTTTCAATTTCTAATACCATTTCTAATACGTGAAGGCTGCGATCCTATGATTGGGGACTTAGCGGGGAATAACGCACTTCACCACGTTGTCATGTATAGGGACAGGGACACACTGATGGTACTGAAGATACTCTTGAAAACTATCAAACATTTTAAAGTGAAATTCGACTTAAATGCTTATAACGAAGAGAAGCGTACGCCACTGCATTTGGTGGCGTTGCGTGGCTTATTGCATGCCACGTATTTACTTTTGGAGGAAGGTGCTTGCGTAAATACGCCGGACGCAAGCGGCCGGACGCCTTTGCATCTCGCCGTCGCCAGAGATTCTCCACTATTAGTTGCAGCGATACTGCGCCATTCAAAGCTGGTTGACGTAGATGTCGTTGATGGGACTGGATATACTGCATTACATATAGCATGTGAAAACAATAAACATCCGGACATTGTTAAGGTCTTGTTAAAATATAAGGCCGATCCAATGAAAAAAGTACACAACCAGACAGCTTGGAAAATGGCAAGTAAACCTATCCGAAATTTGATGCAAAAGTACACAGAAAAAACAGAAACCAGCGAGGATACATCTGACGAAGAGACATCATCAGAAGAATCAGTCGATCATTCGTGCAAAGAGACTCGTTTAATAGACGACTACGTGTTGATGTCTTGTGACCATTGA
- Protein Sequence
- MSEYKGDSNDFNVAFLSSNMESSHNSPSQQVPQLKDISNEDITLDPYLEIVEQPQNRFRFRYRSELNVPHGCIFGESYVSTNIEIHPMVQLLNYEGKATIRCGLAQIDNDEDHPHKITERDQYERISAIVPEKGSYRVAFPGLTIIHTPRRDVENLLAKAYCRDKNIKNVTPEIRRQCKIDAKRINLNIVRLKFSAHDVNTGAEICPPAFSQTINNLKSAATNNLRICRMSRMYGSPRGGDDVFIFVEKVSRNDIQVRFFELSKDDEELWSANGRFSRCDVHYQYGMVFSTPPYWDTNIATDVTVHIQLVRPSDDSVSNLMDFTYRGTPHSINRNPGTSSNYSWYEEYRTEYRYLFELPEGGTETVLKLFNDLKYLKKPIEIDDTQFMKIRGTLEGIFETTLTNGEKFLHMMMLEDLPCFFNHTIKLIKSVNLSHLLNRGNDRGQTILHLTTFNNFQFLIPFLIREGCDPMIGDLAGNNALHHVVMYRDRDTLMVLKILLKTIKHFKVKFDLNAYNEEKRTPLHLVALRGLLHATYLLLEEGACVNTPDASGRTPLHLAVARDSPLLVAAILRHSKLVDVDVVDGTGYTALHIACENNKHPDIVKVLLKYKADPMKKVHNQTAWKMASKPIRNLMQKYTEKTETSEDTSDEETSSEESVDHSCKETRLIDDYVLMSCDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01387393;
- 90% Identity
- -
- 80% Identity
- -