Sstr094724.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388352.1:74453128-74457939[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.052 18 8.6 0.0 1 23 178 201 178 201 0.89 2 13 0.021 7.3 9.9 4.6 2 23 342 364 342 364 0.91 3 13 0.0021 0.74 13.0 2.1 2 23 430 452 429 452 0.93 4 13 0.046 16 8.8 2.5 2 23 727 749 726 749 0.91 5 13 0.0035 1.2 12.3 1.5 3 23 843 864 842 864 0.96 6 13 0.52 1.8e+02 5.5 4.0 2 23 893 915 892 915 0.92 7 13 0.016 5.6 10.2 3.6 2 23 951 973 950 973 0.96 8 13 0.034 12 9.2 2.0 3 23 988 1009 986 1009 0.94 9 13 7.4e-05 0.026 17.6 0.4 2 23 1066 1088 1066 1088 0.95 10 13 1.2 4.3e+02 4.3 1.3 1 23 1230 1252 1230 1252 0.97 11 13 0.00024 0.085 16.0 5.4 1 23 1267 1289 1267 1289 0.99 12 13 0.0012 0.43 13.8 0.5 1 20 1362 1381 1362 1383 0.93 13 13 0.0085 3 11.1 0.9 2 23 1434 1456 1433 1456 0.95
Sequence Information
- Coding Sequence
- ATGGCGTCCACGACTGTTTCTAGCGGAGCAGTGAGTGTGTCTGGACAAGCAGAAACGCCATCCGGATCCCCAGGTCCATTCGTGGAAGTGATGGCGCTCGGGGGTTCTTCTGACCCGCAGTCCGAGGACGGAGAGGATTCCACAAGAAGAGACAACCTAAGTATCCTCGAATATGACGAATTCGATGATCCGAGACTCCGGGTATCTAAAAGACGTTACGATGACTCGGATACGGACTTTTGTCAGACGGCGAAGAAACGCAGGAAACAGTACAAACCCGTGAGGATAGCTGTTCCCGCGGTGTCTACTACTGGAGAAGACAAGAACCAGACGGTCAAGGAATCTGTTTCCTCGACGTCCGCGGTAGCAGGTCCCGAGGATGAAGGATATGAAGGGGAGGAAGACGGTGTGATTGCCCCGAAGTTCGAGGAAGTGAAAGAAGGGCTTCAAGCACGCATGAGTGCCGATACCAAAGTCCTAGCTTCGGCAGGTTTGCAGCAGACTTTTGAAAGATCGGAGAGTACCTTTGCGTTCAAATGCTTTGATTGTGCAGAGGCGTTTGCTTCGCCTGAAGCTCTCGCGGAACACGACAGAGTGGTTCACCGGCAGCAAACGCAACAGAATCCTCCGGCGACATCATCTTCGGAACCTAGTAATCTACCGAAGAGAGATACACCATTGGACCTTGTCCAAGGGCAGACAGCCAATCCAGAGCAACCGACGGAGTATTCGATGGTTCCGTGGGCTTCCGCACATTCCAGGACATCTCCAGGGAACACAACAGTGGATTGCGGCCCAAAATCTCGTGGATCACCCACTCAAATCCCTCCTTTACCGTTCTCCATGAATCCCTTTGGTGACGGAAAGATCCTCATACCCAATTTTTTGGGCATGACTCCACCGTTCCTGTTACCGCACATTCCTGAGAAATCGTCTGCCTTAGTGTCACAGGCCCAGTCAACTATGACGACAGGAAGTACTGACAATAGTTCTTCCACGATAAGGATTTTCAATCCAGAAGCATATTGCGAACTTTGTAACAAGGAGTTCTGTAACAAATATTTTCTGAAAACGCATAAAGCGAATAAGCATGGGATTTACTCAGATACATCGACAATGAGTGGAGGGAGTAATAATTACCCAGTTGCTTCTTTAAGCAACGCTCAGTCAATGAGTAACATAGTCCCGAACAGATCAAGCATAGCTAATGTGTCCCTCAGTGCGTCCAAGCCTACGGCTGAGATTAACAATCTCCCCAAATCGAGTGGTAACGTTCAGATGAAGCTAAGCTGTGAAGTTTGCCACAAAAAATTTAGCAATCGATATCTTGTTTTGAGGCATAAAGCTAAGGTGCATGGGATAGTGGATGACAGTTTCATAGGATCTGAGCTAGCAGGAAAGATCGGATTAGAATATTGGCCAAAATTAGAGAGAGATGAACTAGGAAATACATCCACTAGCTCCGAGACAGGATCTGTTCCATTTGAGAATCAGCCAAATGAAAACAATGCGTCGACTCAGGCAGACTTCTTGGGAGAGTCCCGTCCATTTTCAAGGGAGAAAACCAACATCAGTCCTCAAGTGTCCATGAATAAGTCTAGCCCTTCCATGAGCTTCAAGCTTAGTCCTTCCAATTCATTTACAGAATTGAATATGGAGCAAGAGGAAGCCAAGCAGCAATTTCGGCAAGATTTCACTAACACTCCTTCCACGCCAGAAACAGGTACCACCCATTCCTCCGTTCAGACTTCCATTCCCTCTAATAATTGGTCATCCTTTCCAGTTTCACCGTCCGTCTCCACACCAAAGGTATCCAATCTGTCCCATGAACGGCTGCGTAAAATGGGTGTAATCAATGCTGATGCCTTCTGCGAGATATGTTGCAAAGAATACTGTAATAAGTACTTCCTGAGAACACATAAACTAAAGCGTCATGGAATCGTAACCCCAGAATTTGAGACAAAGGGAGGTAGTGTAGGAACAGTAAGAAATTTCTGGAATCCAATACAAACTAGTCCTTTGAATTTGATCGTTGGAGAACAAAGCGGAGGCAATTGGACGACAATAGAGAAAAATCAGTCAGTAGAGAGGCAGGAAAAAGAGGAAATCAAAAGGGAAGGCTCTATGTCAAACGGCACAAATAATATGCAGACTGATCTCCCAGATGGTGAACGACTGGAATGCAACGTGTGCGGACGTCATTTTCAGAGTCATTACCTTATGCAGATGCACCGAGCGTACATGCATGCCACAACGCCTAATACAGAAAGAAATAATAGCGAGGAGATGAGCTTCTCCGAAGCAGCTGCGATGAAGTCACTTACTTCAAGATGCAATAGTGATGGAAGCAATACAAGGGAGGACCAGTCTCCTAGTAACCTCTTGAACGCTTCTACGACCTCAGAAAACAGCCAGCTTGCAGAAACTGGTGGAATAAGTCAAAGTGACTTCGTGAGTGGAAACCTTCAGAAGATACAGACTATGATAATGCAGTTGAACAAGTTCAACGAGGGTAAAATCAACTGTTGTTCCATTTGCAACAAAGAAGTCGAGGACAAGTTCATGTTGCGGTCTCATATGATTACAGATCATGGAGTGATGATTGATGAAGAAAAAGAAATCCGAACCGAGGAAACCTCCTCCGACAGTCCAAACAATCAAGGTTACCCTTCTTCCTACTGTTCTATCTGTAAGAAAGACTTTTTTGCAAAATGTTTCCTCAAGAAACACATAACTGAGTTCCATGGAAACATTTTGCCCAAAGCGATGAAGGAAGAAATCAAGGAGGCTATCGAGAGAACGCAGAACCCGCAAATAGAAAAACAAGTTTCAGTGACACCAACCAGTAGTTACTGTGAGATATGCAACAAAGAATTGTGCAATAAATATTTCATGAAAACACACATGCAGAGAATGCATGGCATAGAAATCGAGAATGGTTCGCAAATCGGAGGGGTTATATGTGACATCTGCAATAAGGAGCTATGTAGCAAGTACTTTCTGAGAGTCCACAAACAGAATACCCATGGTATAGTGGAAGATGCCGGAATATTACTACAATCCAAAGACAATGGGAACACTTCACTGGGAACACCGCCAGCATATGCTATTCCCGCATTGGACTCTAATGATCAATCCCTAAAGCCATCAGATGCTGGGGACTTGACTCATCGCTATTTTACTCACTTCACCGAAGTGTGCCCGATTTGCAATCGTCGGTTCCGGAGTACCAAGTGGTTGAAAGCCCATTTGATGAACGATCACAGCGAAACAGGTATAGAGAAATGGAAAGAGCTTGAGTTGCAGTACCAGCTACACCTCCAACAGACGCGTCAAGTGATGGCGAAAGCACAATCGTCAGCAACGTTCTCCAGTAAAAGCAGCCAGGCGTTGGAGAACGGCGGAGGGGCCTCCATGCAAGCATGGAAAACAAACATTGGAACCCAATCTGAATTTCCGATAACATTCTCTGAAATAACTGGATCCAGTGGAATTCGGAAATCTTTACAGGACATGGATGGATGTACGGACAACCCTCAGCAATTGGGGGTCAATTACGCATGTAATGAGAAGAAAATTCAACAGAAGGGAGGAGTGAGTTGCACCGATAGTGGGAACGGCACCGAGAAGCACAAGAATACCAATGCTTCCAATCTTTTCGGTACTGGCAATGCGTTAGCAAAAAATTATCATTGCTCCTTCTGCCCATTTAGAACGCCTGTACTTGCTTATCTGTTTGTGCACGAAAAATCTCACGCGGTACCTCAATCGCCGCCTCATCAGGATGCTAAGAAACCGTTCCAATGTACAATTTGCCACCAAAGTTTTGTTCGCACGGATATGTTCCAGCATCACCTCCTTACTCATCAGTATTCAGGACTTTTAGGATCTATTACTACTGGTTCACCAGCAGTACAAACTTACAACAATTCTTGCGAGAAGTCTTTGAACTCTGGAGGATCTCAGGGAGCAAACGATGCTAACACGGTTGATGATGTTCCTAATATACGTGAGCCAATTGTCGAGGTGATCATCGACGAGCAAGGTGGCACACTAAGCGGTGACGAAGTTGGTACTTATAAGTTCAATTGTACCAAATGCACCAAAAACTTTAAATCTCAAGAACTCCTCATGATTCACGCACAGAACAAGGACGAATGCGAGGGCAAAGAAATGGGAGAATCACCTGCAAAGAACGAGACGGATTCACCCACGTTTTCCCCAATAGACAATGACAAAGACAACAGCTGCTCCCCCGTTCCTACCCCCACATCCTACAGGACGGAACATGATCCGCTCAAGTGTACGCATTGTCCTTTTTCCACCGACCAAGTTGCGACCCTAAAGAAGCATATCATGGAAGATCATCCGGGGGAAGTTGCAGAGGCAGTTTTGTGGAGTCCATCCAAGGAGTGCGAGCGGCCCAAAGACGTCGGTTGCGGCGAAGACGGGGATCCAGAGAGGGTGGAGTGGCCGTCCGAGGCACAGTGTGCGTTTGGGATGTCGGCGAGCTTTGAAAGCGGAGAGTTGGAGGCTGCAATGGAACTTCGACGACGTCTTGAGGAAGCGGCAAGGCAGTCGCAAGTTCCGGCATCGTACGCGGTGCCGCAACGGGTACGCCTGCGCGAAGAGGGGAGATTTATCATGCAGCCCTTCCTTCTTGAGGAGCCGGACGAGGGTTCCTCTCGGGACGGAAATCGCTTCCCGTCCCAACCGATCAACGGTAAATTTGTTCCTTCTCTAGTGTTCCTCCCGGTGAGAGAGAAACTCTCAAAGCCTCTCACCGTATCATTTTCTCTTACCCCAGCCTGA
- Protein Sequence
- MASTTVSSGAVSVSGQAETPSGSPGPFVEVMALGGSSDPQSEDGEDSTRRDNLSILEYDEFDDPRLRVSKRRYDDSDTDFCQTAKKRRKQYKPVRIAVPAVSTTGEDKNQTVKESVSSTSAVAGPEDEGYEGEEDGVIAPKFEEVKEGLQARMSADTKVLASAGLQQTFERSESTFAFKCFDCAEAFASPEALAEHDRVVHRQQTQQNPPATSSSEPSNLPKRDTPLDLVQGQTANPEQPTEYSMVPWASAHSRTSPGNTTVDCGPKSRGSPTQIPPLPFSMNPFGDGKILIPNFLGMTPPFLLPHIPEKSSALVSQAQSTMTTGSTDNSSSTIRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIYSDTSTMSGGSNNYPVASLSNAQSMSNIVPNRSSIANVSLSASKPTAEINNLPKSSGNVQMKLSCEVCHKKFSNRYLVLRHKAKVHGIVDDSFIGSELAGKIGLEYWPKLERDELGNTSTSSETGSVPFENQPNENNASTQADFLGESRPFSREKTNISPQVSMNKSSPSMSFKLSPSNSFTELNMEQEEAKQQFRQDFTNTPSTPETGTTHSSVQTSIPSNNWSSFPVSPSVSTPKVSNLSHERLRKMGVINADAFCEICCKEYCNKYFLRTHKLKRHGIVTPEFETKGGSVGTVRNFWNPIQTSPLNLIVGEQSGGNWTTIEKNQSVERQEKEEIKREGSMSNGTNNMQTDLPDGERLECNVCGRHFQSHYLMQMHRAYMHATTPNTERNNSEEMSFSEAAAMKSLTSRCNSDGSNTREDQSPSNLLNASTTSENSQLAETGGISQSDFVSGNLQKIQTMIMQLNKFNEGKINCCSICNKEVEDKFMLRSHMITDHGVMIDEEKEIRTEETSSDSPNNQGYPSSYCSICKKDFFAKCFLKKHITEFHGNILPKAMKEEIKEAIERTQNPQIEKQVSVTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGSQIGGVICDICNKELCSKYFLRVHKQNTHGIVEDAGILLQSKDNGNTSLGTPPAYAIPALDSNDQSLKPSDAGDLTHRYFTHFTEVCPICNRRFRSTKWLKAHLMNDHSETGIEKWKELELQYQLHLQQTRQVMAKAQSSATFSSKSSQALENGGGASMQAWKTNIGTQSEFPITFSEITGSSGIRKSLQDMDGCTDNPQQLGVNYACNEKKIQQKGGVSCTDSGNGTEKHKNTNASNLFGTGNALAKNYHCSFCPFRTPVLAYLFVHEKSHAVPQSPPHQDAKKPFQCTICHQSFVRTDMFQHHLLTHQYSGLLGSITTGSPAVQTYNNSCEKSLNSGGSQGANDANTVDDVPNIREPIVEVIIDEQGGTLSGDEVGTYKFNCTKCTKNFKSQELLMIHAQNKDECEGKEMGESPAKNETDSPTFSPIDNDKDNSCSPVPTPTSYRTEHDPLKCTHCPFSTDQVATLKKHIMEDHPGEVAEAVLWSPSKECERPKDVGCGEDGDPERVEWPSEAQCAFGMSASFESGELEAAMELRRRLEEAARQSQVPASYAVPQRVRLREEGRFIMQPFLLEEPDEGSSRDGNRFPSQPINGKFVPSLVFLPVREKLSKPLTVSFSLTPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01131777;
- 90% Identity
- -
- 80% Identity
- -