Basic Information

Insect: Pachydiplax longipennis
Gene Symbol: -
Assembly: GCA_036926295.1
Location: JAVFKF010000068.1:224790-229541[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.055 22 8.0 0.0 1 19 172 190 172 195 0.92

2 14 0.013 5.3 9.9 4.6 2 23 336 358 336 358 0.91

3 14 0.0013 0.53 13.0 2.1 2 23 424 446 423 446 0.93

4 14 9.7 3.9e+03 0.9 7.4 3 23 618 639 617 639 0.86

5 14 0.029 12 8.8 2.5 2 23 721 743 720 743 0.91

6 14 0.0022 0.89 12.3 1.5 3 23 837 858 836 858 0.96

7 14 0.33 1.3e+02 5.5 4.0 2 23 887 909 886 909 0.92

8 14 0.01 4.1 10.3 3.6 2 23 945 967 944 967 0.96

9 14 0.022 8.8 9.2 2.0 3 23 982 1003 980 1003 0.94

10 14 4.6e-05 0.019 17.6 0.4 2 23 1060 1082 1060 1082 0.95

11 14 0.77 3.1e+02 4.3 1.3 1 23 1224 1246 1224 1246 0.97

12 14 0.00015 0.062 16.0 5.4 1 23 1261 1283 1261 1283 0.99

13 14 0.00021 0.083 15.6 0.3 2 20 1357 1375 1356 1377 0.92

14 14 0.0058 2.3 11.0 0.9 2 23 1428 1450 1427 1450 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.055	22	8.0	0.0	1	19	172	190	172	195	0.92
2	14	0.013	5.3	9.9	4.6	2	23	336	358	336	358	0.91
3	14	0.0013	0.53	13.0	2.1	2	23	424	446	423	446	0.93
4	14	9.7	3.9e+03	0.9	7.4	3	23	618	639	617	639	0.86
5	14	0.029	12	8.8	2.5	2	23	721	743	720	743	0.91
6	14	0.0022	0.89	12.3	1.5	3	23	837	858	836	858	0.96
7	14	0.33	1.3e+02	5.5	4.0	2	23	887	909	886	909	0.92
8	14	0.01	4.1	10.3	3.6	2	23	945	967	944	967	0.96
9	14	0.022	8.8	9.2	2.0	3	23	982	1003	980	1003	0.94
10	14	4.6e-05	0.019	17.6	0.4	2	23	1060	1082	1060	1082	0.95
11	14	0.77	3.1e+02	4.3	1.3	1	23	1224	1246	1224	1246	0.97
12	14	0.00015	0.062	16.0	5.4	1	23	1261	1283	1261	1283	0.99
13	14	0.00021	0.083	15.6	0.3	2	20	1357	1375	1356	1377	0.92
14	14	0.0058	2.3	11.0	0.9	2	23	1428	1450	1427	1450	0.95

Sequence Information

Coding Sequence: ATGGCGTCTACGACCGTTTCTAGTGGAGCAGTGAGTGTATCCGGGCCATCAGAGTCTGGATCCCCATTCGTGGAAGTGATGGCGCTCGGTGCTTCCTCTGACCCGCAGTCGGAGGACGGAGAAGATTCCACCAGAAGAGACAACGAATACGATGATTTCGAAGAGCAGAGACCCCGGGCGTCTCCATCCAAAAGACGTCTCGACGACTCGGACATGGACTTTTGTCAGACGGCGAAGAAACGCAGGAAACAGTACAAACCCGTGAGGATAGCTGTTCCCGCGGTGTCTAATAATGGAGAAGAGAAGAATCAGACGGCTAAGGAATTCACCTCGTCGACTCCGGGTACGGCAGGTCCCGAAGATGAAGGCTACGAAGGAGAAGAAGACGGTGTGATAGGCCCCAAGTTCGAGGATGTGAAAGAAGGGCTTCAAGCCCGCATGAGTGCCGATACCAAAGTCTTAGCTTCGGCAGGTTTGCAGCAGACTTTCGAAAGATCCGAGAGCACCTTCGCGTTCAAATGCTTTGATTGTGCAGAGGCGTTTGCCTCGCCCGAGGCCCTTGCGGAACACGACCAAGTCGTCCACCGACAGCAAACGCAACAGAATCCTTCGGCGACACCATCTTCGGAGTCTAGCAATCCACCGAAGAGAGATATACCATTGGACCTTGCCCAAGGGCAGACAGCCAATCCAGATCAAGCGATGGAGTATTCGATGGTTCCGTGGGCTTCCGCACATTCAAGGACATCTCCGGGGAACACAGCAGTGGATTGTGGCCCAAAATCTCGTGGATCCCCCTCTCAAATTCCTCCTATACCATTCTCCATGAACCCCTTTGGTGACGGAAAGATCCTCATTCCCAATTTTTTGGGCATGACTCCACCGTTCCTATTACCGCACATTCCTGAGAAATCGTCCGCCATAGTGTCACAGGCCCAGTCAACTATGACGACGGGAAGTACTGACAATAGTTCTTCCACGATAAGGATTTTCAATCCAGAAGCTTATTGCGAACTTTGTAACAAGGAGTTctgtaacaaatattttctgaaaacgCATAAAGCGAATAAGCACGGGATTTACTCGGATACGTCGACAATGAGCGGAGGGGGGAATAACTACCCAGGTGCTTCTTTTAGCAACGCTCAGTCGATGAGTAATATAGTCCCGAACAGATCAAACATAGCTAATGTGTCCCTCAGTGCGTCCAAGTCTACGGCTGAGATGAACAGTCTCCCTAAATCGAGTGGTAGCGTTCAAATGAAGCTTAGTTGTGAAGTTTGCCATAAAAAATTTAGCAATCGATACCTTGTTTTGAGGCATAAAGCAAAGGTGCATGGAATAGTGGATGACAGTTTTATAGGATCTGAGCTAGCAGGGAAGATCGGATTAGAATACTGGCCGAAATTAGAGAGGGAAGAACTAGGAAATACATCCACGAGCTCTGAGACAGGATCTGTTCCTTCTGAGAATCAGCCAAATGAAAACAATGCGTCGACTCAGGCAGACTTCATGGGAGAGTCCCGTCCATTTTCAAGGGAGAAAACCAACATCAGTCCTCAAGTCTCCATGAATAAGTCTAGCCCTTCCATGAGCTTCAAGCTTAGTCCTTCTAATTCATTTACAGAACTGAATATGGAGCAAGAAGAGGCCAAGCAGCAATTTCAGCAAGATTTCACTAACACAGCATCCACTCCGGAAACAGGTACCACCCATTCCTCCGTTCAAACTTCCACTCCCTCTAATAATTGGTCATCCTTCCCAGTTTCACCGTCCGTCTCCACACCTAAAGTATCCAATCTATCCCATGAACGTCTGCGTAAAATGGGTGTCATCAACGCGGATGCATTCTGCGAGATATGTTGCAAAGAGTATTGTAACAAGTACTTCCTAAGAACCCATAAATTGAAGCGTCATGGAATAGTAACCCCAGAATTTGAGGCAAAAGGAGGTAATGTAGGATCTGGAAGAAGTTTCTGGAATCCAATACAAACTAGTCCTTTGAATCTAATCGTTGGAGAACAAAGCGGAAGCAATTGGACGACAATAGAGAAAAGTCAGTCAGTAGAAAGACAAgataaagaggaaattaaaagggAAAGCTCTATGTCAAATGGCACAAATAATATGCAGACTGATCTTCCGGAAGGCGAGCGACTGGAATGCAACGTATGCGGTCGTCATTTTCAGAGTCATTACCTGATGCAGATGCACCGAGCGTACATGCATGCCACACCAACAAATGCAGAGAGGAATAATAGCGAAGAGATGAGCTTTTCTGATGCCGCTGCTTTGAAGTCACACACTTCAAGATGCAATAGCAATGGGAGTAATACAAGGGAGGACCAGTCTCCGAGTAACCTCTTGAATGCTTCCATGACCTCAGAAAACAGCCAGCTTGCAGAAACTGGCGGAATGAGTCAAAGTGACTTCGTGAGTGGAAACCTTCAGAAGATACAGACCATGATAATGCAGTTGAACAAGTTCAACGAGGGTAAGATTAACTGCTGTTCTATTTGCAACAAAGAAGTCGAAGACAAATTCATGCTACGATCTCATATGATCACGGATCATGGAGTGATGATTGACGATGAAAAGGAAATCCGAACGGACGAAAATTCCTCCGACAGTCCAAACAGTCAAGGCTACCCCTCTTCATATTGTTCCATCTGTAAGAAAGACTTTTTTGCGAAATGCTTCCTAAAGAAACACATTACCGAGTTCCATGGAAACATTTTGCCAAAAGCGATGAAGGAAGAAATCAAGGAGACTGTAGAGAGAACGCCGAACCAGCAAATCGAGAAGCAAGTATCAGTGACACCAACCAGCAGCTACTGCGAGATATGCAACAAAGAATtgtgcaataaatatttcatgaaaacacACATGCAGAGAATGCATGgcatagaaatagaaaatggtTCGCAAATCGGAGGGGTTATATGTGACATCTGCAATAAGGAGCTGTGTAGCAAATACTTTTTGAGAGTCCACAAGCAAAATACGCATGGCATAGTAGAGGATGCTGGAGTATTACTACAATCCAAAGACAATGGGAGCACCTCACTGGGAACACCGCCAGCATATACAATGCCCTCATTGGATTCAAACGATCAATCCCTCAAGCCATCTGACGCTGGAGACTTGGCTCATCGCTATTTCACTCACTTCACCGAAGTGTGTCCGATTTGCAATCGTCGCTTCCGGAGCACCAAGTGGTTGAAGGCTCATTTGATGAACGATCACAGCGAAACAGGCGTAGAGAAGTGGAAAGAGCTTGAATTGCAGTACCAGATACAGCTTCAGCAAACGCGTCAGGTAATGGCAAAAGCACAATCTTCAGCCACGTTCTCCGGTAAAAGCAGCAGCCAGGCGTTGGAGAATGGCGGAGCTTCCATGCAAACATGGAAAGCGAATATTGGAACTCAATCCGAATTTCCTATGAGCTTCTCTGAAATAACTGGTTCCAGTGGAATGCGGAAATCTGCACAGGACATGGATGGATGCCAGGACAATCCTCAGCAGACGGGTGTCAATTACGCATGTAATGAGAAGAAATTGCAACATAAGGGAGGAATGACTTGCACCGATAGTGGAAACGGCACCGAGAAGCACAAGAATACCAATGCTTCCAATCTTTTCGGTACTGGGAATACCTCAGCAAAGAATTATCATTGCTCCTTCTGCCCCTTTAGAACGCCTGTTCTTGCCTATCTGTTTGTGCACGAAAAATCTCACGCGGTTCCTCAATCGCCGCCTCATCAGGATACTAAGAAACAGTTCCAGTGTACAATTTGCCACCAAAGTTTTGTTCGCACGGATATGTTCCAGCATCACCTCCTTACCCATCAGTATTCGGGACTTTTAGGATCCATTACTACTGGTTCACCAGCAGTACAAACTTTCAACAACTCTTCCGATAAGTCCATGAACTCTAACGGATCTCAGAGAGCAAACGATGCTAACACGGTTGATGATGTTCCTAATATACGCGAGCCGATCGTTGAGGTGATCATCGACGAGCAAGGTGGCACGCAAAGCGGTGACGAAGGCGGTACTTACAAGTTGACCTGTACCAAATGCAACAAAAGCTTTAAATCTCAAGAACTCCTCCTGATTCACGCACAGAACAAGGACGAATGTGAAGGCGAAGAAATGGGAGTATCACCGCCAAAGAACGAGACGGATTCGCCCGCTTTTTCCCCAATCGACAACGACAAAAACAACAGCTGTTCCCCCGTTCCTGCTCCTGCACCCTTGAGGACGGAGCATGATCCGCTCAAGTGTACGCATTGTCCTTTTTCCACCGACCAAATTGCGACCCTGAAGAAGCATATCATGGAAGATCATCCGGGGGAAGTGTCGAGTCCATCCAAGGAGAGCGAGCGGCCCAACGAAGAGGAAGAGTGGGCGTCCGAGGCGCAGTGCGCCAGCTTCGAAAGTGGAGAGCTGGAGGCTGCGATGGAACTTCGGCGACGTCTTGAGGAAGCGGCAAGGCAGTCGCAAGTTCCGGCATCGTATGCGGTGCCGCAACGAGTACGTCTTCGCGAAGAGGGTTTGGGGAGAACCTCCTTTATCATGCAGCCCTTCCTTCTTGAGGAGCCGGACGAGGCCAGGGGCTCCTCTCGGGACGGAAATCGCTTCCCGTCCCAACCGATCAACGGTAAATTTGTTCCTTCTCTAGTGTTCCTCCCGGTGAGAGAGAAACTCTCAAAGCCTCTCACCGTATCATTTTCTCTTACCCCAGCCTGA
Protein Sequence: MASTTVSSGAVSVSGPSESGSPFVEVMALGASSDPQSEDGEDSTRRDNEYDDFEEQRPRASPSKRRLDDSDMDFCQTAKKRRKQYKPVRIAVPAVSNNGEEKNQTAKEFTSSTPGTAGPEDEGYEGEEDGVIGPKFEDVKEGLQARMSADTKVLASAGLQQTFERSESTFAFKCFDCAEAFASPEALAEHDQVVHRQQTQQNPSATPSSESSNPPKRDIPLDLAQGQTANPDQAMEYSMVPWASAHSRTSPGNTAVDCGPKSRGSPSQIPPIPFSMNPFGDGKILIPNFLGMTPPFLLPHIPEKSSAIVSQAQSTMTTGSTDNSSSTIRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIYSDTSTMSGGGNNYPGASFSNAQSMSNIVPNRSNIANVSLSASKSTAEMNSLPKSSGSVQMKLSCEVCHKKFSNRYLVLRHKAKVHGIVDDSFIGSELAGKIGLEYWPKLEREELGNTSTSSETGSVPSENQPNENNASTQADFMGESRPFSREKTNISPQVSMNKSSPSMSFKLSPSNSFTELNMEQEEAKQQFQQDFTNTASTPETGTTHSSVQTSTPSNNWSSFPVSPSVSTPKVSNLSHERLRKMGVINADAFCEICCKEYCNKYFLRTHKLKRHGIVTPEFEAKGGNVGSGRSFWNPIQTSPLNLIVGEQSGSNWTTIEKSQSVERQDKEEIKRESSMSNGTNNMQTDLPEGERLECNVCGRHFQSHYLMQMHRAYMHATPTNAERNNSEEMSFSDAAALKSHTSRCNSNGSNTREDQSPSNLLNASMTSENSQLAETGGMSQSDFVSGNLQKIQTMIMQLNKFNEGKINCCSICNKEVEDKFMLRSHMITDHGVMIDDEKEIRTDENSSDSPNSQGYPSSYCSICKKDFFAKCFLKKHITEFHGNILPKAMKEEIKETVERTPNQQIEKQVSVTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGSQIGGVICDICNKELCSKYFLRVHKQNTHGIVEDAGVLLQSKDNGSTSLGTPPAYTMPSLDSNDQSLKPSDAGDLAHRYFTHFTEVCPICNRRFRSTKWLKAHLMNDHSETGVEKWKELELQYQIQLQQTRQVMAKAQSSATFSGKSSSQALENGGASMQTWKANIGTQSEFPMSFSEITGSSGMRKSAQDMDGCQDNPQQTGVNYACNEKKLQHKGGMTCTDSGNGTEKHKNTNASNLFGTGNTSAKNYHCSFCPFRTPVLAYLFVHEKSHAVPQSPPHQDTKKQFQCTICHQSFVRTDMFQHHLLTHQYSGLLGSITTGSPAVQTFNNSSDKSMNSNGSQRANDANTVDDVPNIREPIVEVIIDEQGGTQSGDEGGTYKLTCTKCNKSFKSQELLLIHAQNKDECEGEEMGVSPPKNETDSPAFSPIDNDKNNSCSPVPAPAPLRTEHDPLKCTHCPFSTDQIATLKKHIMEDHPGEVSSPSKESERPNEEEEWASEAQCASFESGELEAAMELRRRLEEAARQSQVPASYAVPQRVRLREEGLGRTSFIMQPFLLEEPDEARGSSRDGNRFPSQPINGKFVPSLVFLPVREKLSKPLTVSFSLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385158;
90% Identity: -
80% Identity: -