Sstr002289.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388351.1:28093385-28094966[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-07 0.00033 23.0 0.0 3 38 7 41 5 46 0.93 2 2 5.2 5.6e+03 -0.2 0.0 1 11 239 249 239 250 0.87
Sequence Information
- Coding Sequence
- ATGTTCATGTGGAGTATAGAGGAAATGAATAATGCAGTTGCAGCAGTAGAAGCAGGTGTTGAGATTCAAGAAGCATCGAGACGATTTTCTGTTCCATTTGGTACCTTTCAGCGCCGAATGAAAGTTGTTAAGGAAGACAACACTCAACGATCCATTGGTGGGCAGACCATATTTACGGAGGTGCAGGAAAAGGAACTTCTTGAGAGACTTCTGCACCTGGAGTCGAAAGGATTTCCATTGACACCACAAGACGTCCACAAGGCTGCCTTCAAGCTTACCGAAGAAGAAAAGATTGCTCATAAATTCAATGTCGCGAAAAAGGAAGCCGGTAAGGATTGGCTGAACAGCTTCATCAAGAGGCACGGACAGAAACTGTCGCTGCGCTGCACTGCCTACCCAACACCACCAAAAGCTTTGGCCTGTAAAGATAAAAGGGACATTCACGCAGTTACGAAAGAACGAGGTGAAAATGTAACTGTGATAGCATGCTGCAGTGCATTCGGCTCATTTGTCCCTCCGGGTGTCATTTTCAAGGGGAAGCGTAAGAAGGTCGAGCTTGAACGACACATGCCACCGTCCACTGCGGTGTGCATAGCTATTCAAAAAGGCAATTTTGGAGAAATATTTTCTCTAGCATGGATGTCCACTATGGTGTCCACGGCAGTCAATTGCTTTAGAGCCACAGGAGTGTTCCCGGCCAACCGTTTTGCAGTGACTAACGACAAACTCACAAAAGCTGTAGAACCCGTGGAATGTGATCCTGATCCACACCATCCTCAAGACACCCAAACATGTCAAGGATCGACTCAAGTGAGAAGATTTTTTCCTTCATCTATGAAAATCTCTGTGAAAAGAAAAGGCCCTGGAAGGAATAGACAAGAAGCTGAAGTGCTTACGTCGCCGCTGCATTTTGCCTCTCTCGGCAACAGCAAGCCTGGTGAATCTGAACTGGACAAAATAAGAAAAGTGAGCCTCCAAAAAAACCTACCAGCATCTCCAAATGGGCCTGCAGATGGCAATGAAGACAACTGTGGGTTTTGTGGCAGGTACTTTTACACGGCAACCTCCAGCAAGTATAAAAACTGGATTCAGTGCATCATGTGCAATGTATGGTTCCATGAGGTGTGTGTTGGAGCCTCAGGGAAATCTTCTTTTACTAGAGGGAAGTGTTTCTAG
- Protein Sequence
- MFMWSIEEMNNAVAAVEAGVEIQEASRRFSVPFGTFQRRMKVVKEDNTQRSIGGQTIFTEVQEKELLERLLHLESKGFPLTPQDVHKAAFKLTEEEKIAHKFNVAKKEAGKDWLNSFIKRHGQKLSLRCTAYPTPPKALACKDKRDIHAVTKERGENVTVIACCSAFGSFVPPGVIFKGKRKKVELERHMPPSTAVCIAIQKGNFGEIFSLAWMSTMVSTAVNCFRATGVFPANRFAVTNDKLTKAVEPVECDPDPHHPQDTQTCQGSTQVRRFFPSSMKISVKRKGPGRNRQEAEVLTSPLHFASLGNSKPGESELDKIRKVSLQKNLPASPNGPADGNEDNCGFCGRYFYTATSSKYKNWIQCIMCNVWFHEVCVGASGKSSFTRGKCF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01384613;
- 90% Identity
- -
- 80% Identity
- -