Sstr111863.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388341.1:1388835-1390229[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-07 0.00027 23.3 0.0 3 38 7 41 5 46 0.93 2 2 4.4 4.7e+03 0.1 0.0 1 11 251 261 251 262 0.87
Sequence Information
- Coding Sequence
- ATGTTCATGTGGAGTATAGAGGAAATGAATAATGCAGTTGCAGCAGTAGAAGCAGGTGTTGAGATTCAAGAAGCATCGAGACGATTTTCTGTTCCATTTGGTACCTTTCAGCGCCGAATGAAAGTTGTTAAAGAAGACAACACTCAACGATCTATTGGTGGGCAGACCGTATTTACGGAGGTGCAGGAAAAGGAACTTCTTGAGAGACTTCTGTACCTGGAGTCGAAAGGATTTCCATTGACACCACAAGACGTCCACAAGGCTGCCTTCAAGCTTGCCGAAGAAGAAAAGATTGCTCATAAATTCAATGTCGCGAAAAAGGAAGCCGGTAAGGATCGGCTGAACAGCTTCATCAAGAGACACGGACAGAAACTGTCGCTGCAACCTACTTCAATCAATTTACAACATGGACGAGACTGCACTGCCTACCCACCACCGCCAAAAATTTTGGCCTGTAAAGATAAAAGGGACATTCATGCAGTTACGTGCAAAGAACGAGGTGATAATGTAACTGTGATAGCATGCTGCAGTGCATTCGGCTCATTTGTCCCTCCGGGTGTCATTTTCAAGGGGAAGCGTAAGAAGGTCGAGTTTGAACGACACATGCCACTGTCCACTGCGGTGTGCATAGCTATTCAAAAAGGCAATTTTGGAGGAATATTTTCTCAAGCTTGGATGTCCACAATGGTGTCCACGGCAGTCAATGGCTTTAGAGCCACAGGAGTGTTCCCGGTCAACCGTTTTGCAGTGACTAACGACAAACTCACAAAAGCTGTTGAACCCGTGGAATGTGATACTGCTCCACAACAACCTCAAGACACCCAAACATGTCAAGAATCGACTCCAGTGAGAAGATTTTTTCCTTCATCTATGAAAATCTCTGTGAAAAGAAAAGCCCCTGGAAGGAATAGACAGGAAGCTGAAGTGCTTACGTCGCCGCAGCATATTGCCTCTCTCGGCAACAGCAAGTCTGGTGAATCTGAACTGGACAAAATAAGAAAAGTGAGCCTCTAA
- Protein Sequence
- MFMWSIEEMNNAVAAVEAGVEIQEASRRFSVPFGTFQRRMKVVKEDNTQRSIGGQTVFTEVQEKELLERLLYLESKGFPLTPQDVHKAAFKLAEEEKIAHKFNVAKKEAGKDRLNSFIKRHGQKLSLQPTSINLQHGRDCTAYPPPPKILACKDKRDIHAVTCKERGDNVTVIACCSAFGSFVPPGVIFKGKRKKVEFERHMPLSTAVCIAIQKGNFGGIFSQAWMSTMVSTAVNGFRATGVFPVNRFAVTNDKLTKAVEPVECDTAPQQPQDTQTCQESTPVRRFFPSSMKISVKRKAPGRNRQEAEVLTSPQHIASLGNSKSGESELDKIRKVSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01384616;
- 90% Identity
- -
- 80% Identity
- -