Sstr063233.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- bab1
- Assembly
- GCA_947579665.1
- Location
- OX388350.1:982730-1003739[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-09 1.1e-06 30.9 0.0 2 39 432 470 431 474 0.91 2 4 1.9e-08 2e-05 26.9 0.0 1 38 489 526 489 532 0.89 3 4 1.2e-14 1.3e-11 46.7 0.0 3 44 546 587 544 588 0.95 4 4 3.5e-17 3.8e-14 54.8 0.0 1 40 595 635 595 639 0.92
Sequence Information
- Coding Sequence
- ATGGCAAGCcaacattactgtttgcggtggaataactaccagtcaaacatgacatccgtatttcatcaacttcttcaagatgaagctttcgttgatgtgactttggcatgcaatgaggcatcgttaaaagcacacaagGTTGTACTTTCGGCGTGCTCCCCATTTTTTCAGAAGTTAttattggaaaatccctcagaCCAGCTGAAAATTAAAGGTCTTTGTGAAGTTTCTGACAAGAATGCAGGCGGATCGGACGGTGTAACTTCTCTTCCTATATCTCGCCGTTCATTCACCAAACTTCGCTTATCTGGTTACAAGCGACGATGCGTCGACCAGGCGAGGAGGGCAATCTTCCCCGATCATCACCGGCACCATCACCAGGGAGGAATGGGAATGGGCATGAGGAGGCGCTCTCTGGACACCGAGCGAGGGCACGGCACCTTACCACCGCCCGGGGCACCTCCAGGTCCCGTCAGCGGCGACTACGGCAAGACGGGAGACCCCCAAAGCCAACCACAACAGCACGGGGCTGTCGGAGTGCCATCCAACGGAACCAGAGGAGCCACTGGTGGTGCAGAAGGGGCTCCCTGTTGTCCGGAGGGGGCCCAAGGGGAGAACAAGGGTGCTGCCGCGACCAGTGTGCCAGAAGGTGGAGAGGGGGGGAGTGAAGGGGTGACTGGGGGAGTGGGTGGCGAGGGAGGAGAGAGACACCCGGTGGAGAAGCAGGAGCCGGGAGTTGTGGTGAAGGAGGGACATGAGATGGTGGGCAGTGGGGAAAGACAGCCCCCACCGCCTCCCAGTCAACCTCAACAAGGAGGCAGGATGGAGGAGTTGGAGATTTACCCATGCTCCCCAGCTGACAGGATGCAAGGACCTCGTCCTGAGCACCCCAATTATCCACGCAGACACAGTGATGAGGTGAAGGTGAAGCTGGAACTTAGAGCTATCGAGCCAGATGCTGTTATAGATATTGACAGTCATATGTCCGAAAGGTCCCAGTTGTCTGTCTCCCTGTCCTTGGCTGATACACCCTCGGTTCCCTCAATCTCTAATGAGAATGTTGATGATGAGCACACAATGATGATAACTCCAGAACTTCTAGGTCTTATTCCATCTTCTTCAGGACATTCTGATGGCAGTGAGGTCTCCGGCACCCCAGGGGGTGGCGCTGCCAGTGGAGGTGGAAGCAATAACAGCACCATTGGAGGAGGTGGGGTGGGAGGGGGAGGGGGTGGAGGAGGGGGTGGAGGCGTAGTTATCAAGGGTGGACCTGGAGGCCCCAAGAACTGGAACCACGAGGACATGGAAATGGCCCTCGATGCACTTCGTACACATGCCATGAGCCTAACCAGAGCATCTGCCACTTTTGGAATACCGTCCACCACTCTCTGGCAGCGAGCTCATCGTCTTGGAATCGACACTCCAAAGAAGGATGGGGGAGGACCTCCCGGAGGGAAGTCATGGTCAGAAGATGACTTGACTACTGCCCTTGATGAGCTGAGGGCAGGCCGGATTTCAGCAAACCGAGCTGCCAAGGTCTACCGTATTCCAAGCAGTACTCTATACAAGATAGCTAGAAAAGAAGGGATCAAGCTCTCTGCTCCATTCAACGCCACACCCACCACATGGTCATCCGAGGATCTAAACAGAGCCTTGGAGGCAATCCGACAGGGGGTTTCCGTGCAGAGGGCATCTTCAGAACATGGCATACCTAGCGGAACTCTGTACGGCAGGTGCAAACGAGAGGGAATAGAGCTGTCAAAGAGCAACCCAGTCCCATGGTCCGAGGATGACATGAACGAGGCGCTGGAGGCAGTTAGAGTGGGTGAGATGAGCATCAACCAAGCCGCAATTCATTATAACCTTCCATACTCGTCCCTATATGGCCGATTCAAAAGGATTCGATTTGAGGCTGAGGGAGGTGGCGTGGAGAGTGGGTCCACGCAAGGTCCTCAAGGTCCGGGCAGTGGCAGTGGGATAATGCTCACCCCAAGTGGGGGCGGGCACGAGGGCATCGACTTTGAGATGTACAGCAGCTGA
- Protein Sequence
- MASQHYCLRWNNYQSNMTSVFHQLLQDEAFVDVTLACNEASLKAHKVVLSACSPFFQKLLLENPSDQLKIKGLCEVSDKNAGGSDGVTSLPISRRSFTKLRLSGYKRRCVDQARRAIFPDHHRHHHQGGMGMGMRRRSLDTERGHGTLPPPGAPPGPVSGDYGKTGDPQSQPQQHGAVGVPSNGTRGATGGAEGAPCCPEGAQGENKGAAATSVPEGGEGGSEGVTGGVGGEGGERHPVEKQEPGVVVKEGHEMVGSGERQPPPPPSQPQQGGRMEELEIYPCSPADRMQGPRPEHPNYPRRHSDEVKVKLELRAIEPDAVIDIDSHMSERSQLSVSLSLADTPSVPSISNENVDDEHTMMITPELLGLIPSSSGHSDGSEVSGTPGGGAASGGGSNNSTIGGGGVGGGGGGGGGGGVVIKGGPGGPKNWNHEDMEMALDALRTHAMSLTRASATFGIPSTTLWQRAHRLGIDTPKKDGGGPPGGKSWSEDDLTTALDELRAGRISANRAAKVYRIPSSTLYKIARKEGIKLSAPFNATPTTWSSEDLNRALEAIRQGVSVQRASSEHGIPSGTLYGRCKREGIELSKSNPVPWSEDDMNEALEAVRVGEMSINQAAIHYNLPYSSLYGRFKRIRFEAEGGGVESGSTQGPQGPGSGSGIMLTPSGGGHEGIDFEMYSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01131475;
- 90% Identity
- iTF_01384997;
- 80% Identity
- iTF_01384997;