Snob003901.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- Rel
- Assembly
- GCA_027564815.1
- Location
- JANTOP010053886.1:10707-13190[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-46 3.8e-42 144.2 0.2 1 168 64 246 64 247 0.91 2 2 1.8 8.7e+03 -3.4 0.0 9 48 348 388 344 396 0.72
Sequence Information
- Coding Sequence
- ATGTTATCACCATCGTCCTCCTCCCGTTCCCCATCCCTGTACAGTGATACGGGAACGGGTAACGGGGCCGCCTATCAACTAAACTACCTACAAATCGGTGATGAAACGGATAAATTCAATCCATATCCATCCACCGTTGATGTTGACCAAAAAATCATTCTCCCCCTAACGAATGTCTCCAGTCCATATCTGGTGATCCTGGAACAGCCGGTTGAAAAATTTCGCTTCCGTTATAAATCGGAAATGCATGGAACGCACGGTTCGTTGACGGCAATCAAAACGGAAAAATCGAAGAAATCGTATCCAACGGTTGAGTTGCGTGGTTACACCGGTGAAGCATTGGTTCGTTGTTCATTATACCAAACGAAAGTGGATCGTAATCTACTCCATTCCCATAGTTTAGTGGTTCGGAAAGGTTCCGAAGATATGAAGGATCCACATACGGTCACCATGTCCCCAAAAAATGGTTACCGTGCCGTATTCCAAGGTATGGGAATCATTCATACGGCGAAAAAATATATAGCCGATGAATTATATCAAAAACTCTTGGAAAAGAAACTGTTTGAAGATGGTAGGGAGTTGACAGCGTTGGAAGAGGCAAAACTACGGAATTTAAGTGAGAATGAAGCGAAAAATATGAATTTAAACCAAGTATGTTTATGTTTCGAAGCGTATCACAATGTTAACGGGCAACATAAACTCCTCTGCCCTCCCATTTATTCCACATGCATTAATAACATGAAAAGCGCTTTAACCGGTGAATTAAAAATCACTCGGCTATCGTCGGTGATGAGTTCAACAGCCGGCGGTGATGATATATTTTTATTTTGCGAGAAAGTGGGTAAGAAAAATATAAAAGTACGATTTTATGAGGTGGATGAGTACGATGATGTGATATGGGAAGATTGGGGACGTTTCACGGAAGCTGATGTTCATCATCAGTATGCGATCGCTTTGAAACCGCCACCGTACCGGACACAAGACATTGACCAACCGGTTAATGTTTTCATTCAACTGTTTCGACCAAGCGATCAGGATCACAGCGAACCGCTAAAATTCCGATACAAACCAAATAATTGTCTGTCTGCCAGGAAACGTCAACGAATGAATTCAACGTACAGTTCAGCGGAAATGCCATCCGTTTTACCGCAACCGTACGATGGTTACGAACCACAGTACGATGTACGAATGGGTGCACCACCATCGATCAGTAACGAATACGATAAGATTCGAATGATTGAGGAGGTTAGCGCTTATCCACAAATGTCATCGGCTAGTATCCCATCCACGGAATTCCTTAATTTCATCGAACATCTACGAAATAATTCCGATGAAATGGCTAAAGTATGTGGATTTAATCCGGAAGAATATTTGCTGCGAAATGATGGGGTTGCTGTATCGATCCAATCAACCCAATCAACAGCAAATGAACATTGGTACAAGAAATTGTTGCGCACGATTCAAGAGCAACCGAAAATGGCACCGATTCTTTTACGGAAATTACTGCAACACACGAATGCGGAAAATGAAAATATCTTACATTTGATTGTCGGCGGAAATAGCAGTAAATCCGTTATATCCGAACTGTTAGCGGTCGTCAAACAATTGAATTTAATCGATTGTTTGCAGTGGACGAACAATCAGAATGAGACCCCGTTACATTACTCCTGTATCTTCAACAAACCGTTTTATACGAAATTGTTAATCGAATCGGGAGCGAATGTAAATTCGATTGATGCCGATGGTAACACCGCTCTGCATCTAGCCGTTAAATCAGAATATTCTGATTGTATAACGGAATTGTTACGCCGCGAAAACTATCGGAATGCACAAACCATTGATTTGAACATAATCAATGATGATGGATTGACGGCTTTACATATCGCCGTACGGAATACAAACGTCGATATCATTGAACAGTTGCTGAATGGTGGTGCATCGATAACGGTAACCGAACAAAAACATGGTAACAACATTTTACATATGGCTGTTGAACGCGGATCAACGAAAATTGTTCGATTCTTAATGGAACAAACCCAAATTGATCCGTTACAAATGAATAATTCCGGTCACACCCCATTATATATAGCGAATGTCTTACCGGCGGATAATTCGGGCCGGGAAATAATTGAATTGCTTACGAAAAAGGAACAGAAAGTAGATATCGGTGGTCATGGTGTGGTAAAGAAGGAACCAATCGAACCGTTATTCGATTCGTATTGTCAATTAGAAATGTGTACATTGTTTAATAAATCAAATGAATGGAAACGATTGGCTGGATTGTTTGGCTTCAATGATTCGAAGCGAATGGTGGAATGGTCTGCGGCACCGAATCCATCAAAATTGCTATTCGAGTATATGGGTTCGGTTGACGGTGGGGTTACGATATCCCAATTGTGTCATGTTCTGTCACAAAATGGATATAATGATGCGTTATGTTCGATTGATGCGATGATTGGACGAAAGTTGGAAGGGAATTTTTAA
- Protein Sequence
- MLSPSSSSRSPSLYSDTGTGNGAAYQLNYLQIGDETDKFNPYPSTVDVDQKIILPLTNVSSPYLVILEQPVEKFRFRYKSEMHGTHGSLTAIKTEKSKKSYPTVELRGYTGEALVRCSLYQTKVDRNLLHSHSLVVRKGSEDMKDPHTVTMSPKNGYRAVFQGMGIIHTAKKYIADELYQKLLEKKLFEDGRELTALEEAKLRNLSENEAKNMNLNQVCLCFEAYHNVNGQHKLLCPPIYSTCINNMKSALTGELKITRLSSVMSSTAGGDDIFLFCEKVGKKNIKVRFYEVDEYDDVIWEDWGRFTEADVHHQYAIALKPPPYRTQDIDQPVNVFIQLFRPSDQDHSEPLKFRYKPNNCLSARKRQRMNSTYSSAEMPSVLPQPYDGYEPQYDVRMGAPPSISNEYDKIRMIEEVSAYPQMSSASIPSTEFLNFIEHLRNNSDEMAKVCGFNPEEYLLRNDGVAVSIQSTQSTANEHWYKKLLRTIQEQPKMAPILLRKLLQHTNAENENILHLIVGGNSSKSVISELLAVVKQLNLIDCLQWTNNQNETPLHYSCIFNKPFYTKLLIESGANVNSIDADGNTALHLAVKSEYSDCITELLRRENYRNAQTIDLNIINDDGLTALHIAVRNTNVDIIEQLLNGGASITVTEQKHGNNILHMAVERGSTKIVRFLMEQTQIDPLQMNNSGHTPLYIANVLPADNSGREIIELLTKKEQKVDIGGHGVVKKEPIEPLFDSYCQLEMCTLFNKSNEWKRLAGLFGFNDSKRMVEWSAAPNPSKLLFEYMGSVDGGVTISQLCHVLSQNGYNDALCSIDAMIGRKLEGNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -