Basic Information

Gene Symbol
TRERF1
Assembly
GCA_026546915.1
Location
JANSTS010012129.1:25012-33004[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-08 3.1e-05 23.7 0.1 3 45 986 1028 984 1029 0.94

Sequence Information

Coding Sequence
ATGTGCAGCGCATCAATGGGTGCCGAGGGCTCCGTCACATTGCAGCTGCGAGAGGCAGTCCAGGCTCCGGAATCCAGTGGGTCCTTAGATGCAACCTCGCTGACAATTGGATATCCTGATTCAGATATGTTGGCCGATATGCTGGGAAATATACAAGCTGCAGCAGGTGATGCAAGCTCACCACATGGTGCCACCTGCATCCAGTACACGAATGGCGGCGATGGCTCGAAGCCGTCATCGCCCAGTTCACCGGCTGGCGCTGGCAATGAGGGTCTCACGCGCCAGCAATTGGATCTCATTAGCCAAATTATGCAGCAAACGAAACAGGCGAACGCCGGACTGACGACGGCTACCGGCCATAAGCAAGTTCAAAGGCCACGAACATGGAACATGCAGACACAATTGCAGCAAACCCAGTCAAAATCATCTTCAAGTTCCGAAAGTCCCACAACATTAATTACCGTGACAGCGTCGAATGCACCCAAAGTTGAGCAAAAGCCAGTCGAGTGCAATTTATGCCATCGTAAATTTAAGAACATACCCGCCCTAAATGGGCACATGCGACTGCATGGTGGATACTTCAAAAAAGACACCGAAATAAAGAAATGTGATAAAAAGGAGACCCCGGGACCTCCTCTGCAGACAGCCAGCGTTGGCGTACGCGCACTCATCGAAGAGAAAATTATTAACAAACGCAGCAAAGACTTAAAGGGTGCTTTTGTCATTCCCGCACCACCGATGCTAACCTCCCGACGCCTGTCCGACACTGATAGTTTTGTAGCGTTGAAAACCTCAACGGCAAACAACGGCTCGCCAAATCATGCAACAGTGGTGGCTGCAAGTGACTCGACCACACAAACCACAACAGCGTCGACCAGCATAGTTGTCGCTCAAACTACCAATAGTACAATAAATGTTCAGGCGAAACATCAACAATCGATTAGTGTATCACCGCAGGAAGTTGTTAAAGACGCTACTTTAATTGAGTTGCTGAAGCGTGGCACCAAAGTGGCTGTGAAGCGAACTTGTTCCGATCCCGGACAATTATCGTTTGGCGTGACAACGGCCCAATCGCAACAACAGCAAATATCGTCGTCGCCCGTCGCCACCGTCACACATCCGTCAAGCTCGTCACTTTCAACACCGGCCACGCCGAATACCACGCCACCATTGGCCATTTCATTGTCAGGCGGTAATACAGCACCGTTGGCCTTGACAATATCGCAGGCTCCTAGTGACTCAGGTGATGTGTTTACGTTAGCTTATTCCACGGACACATCATCGGCCACATTTTTCGGTGATAACGATATCTACAGCGTGTCCGACACAGCGATGCTCTTGCAAGCAGTTGACTCAATACAGTTACTGCAAGATACATCATCCCCTGACCAGATGGATGATATGCCGTCATTAAATGATTACACCCTGAGCGACAACAGCGGCTTAAATGATTCTGCAAGTTTGTCTAGTGGATTCACACCATCGCGTCAGCTACAAGCTGTCCTGAATTCGCCACTGCCGGAGAGTCTTGCCGAATTCAGTGCACTTCATTCCAAAGATTATGTCCTGTATGGGTGTACAAATACTGGTTCCCCACACACCCAGTCATCTGCCTCGCCACTTCCATCTCCACTGGCATACCCAACGCCACCAGCCAGTCATGAGGCAGTAGCACAAGCCTCACCGTTCCTTGACGAGTCGCATCATTTCACTGATGGCAATTCATTCTTTGATGACAAAAAGAATATAAATTTCCTGGAGGAAAATGGTGCAGAGTTTTTCAAGGACCCTAAAGACGAGCAACTCACCGACAATGAGCGAATACTTAAACTTAAAAACGAGTTGTTCAACGATTCCAAGTCGGTTCTTGAGCGTAGTCACTTCTTTAAGACGTGCCATAACGACGGCATGAGAATTAACGTGCACAACGAACGAACTCTTGCCGATTTCCACCACCAAAATTTGTCCTTCTTGGATGAACCGCAGAACTACTTGGATGATACACGCAACACATCGTCACCACTTTCAGCTGCCTTTTTTACAGCAACTATGTCAAGTGCTGAGGAAGTTAAGGAAGCCCTCGAGGAAGTGCTGCCAAACGAGGAGAATCTAAATGGTGACCAGCCCAATGACATTGATTTGTATTATTTGCCTGCACTCCCTTTGCAATCGCAGATGATGCCAAACTCCGACGATCCCCTACTTTCTTCGTCGCCGAAAGACTTTTCCAACAAGCCACATCCACATAAATTTGATTTCAGCGCATTCAATCCTCCGAGCGTCAAGAAGCAGCGTCCCAACGAAGACAAACCCAATCAAAGTATGGAGGAAGATCAGAAACCACAAATGAATCAACCAGAGCTTACATCTAAAATCAACGAAGTGTTCTTAACTCCAAACAGTATCTGTTCTCCTCCGGTGATGACATCACTTACGAGAACTAATCATTGCTCGTCACTGCTTCGGAAGCGCCTGCACAAGGATATCATGAAGAAACACGTGGTGTACAAGTCCAAGTTGAGGCAATCTTCCTGCACTCATTACACTCCAACGCCTCTACTGAACCCAGATCGCATTGCACCAGGTCTCTATTCCTCTGTTGCCCATTTGGCTGAGGACGATGTGCTCAACTTTGACTTCACAGAGAGCAATTGCATGTCAGAATTTCTCGACAAATCAAAAGTCAACATAGGACTTGACTATCAGGCCACAATTCCACCGTTCACTGAATCCAATCGCCTGGATTGTTACTCCGACGACAAAATCCAGTGGGACCCAAGTATAGTAAACGACGAGAAAGCAGTACAGCGGTTTATTTGCCTTGCAAAATCATCCGGTATTCCATTGGGTTGCAACTCTGAGGAATCTGCACTAAAGACATTAATGGAAGCGAACGGTGAAACAAATATTGCGATTCTGTCAATGCTGCAGACACCAAACACGCTGCCTCATAGACAGTGGTCCACCCAGGAGATCGAGGTGTTCCTGAAGGGACTAGAATCACGTGGAAAAGACTTTTATAGAATTTCGAAAGAGATTCCCACCAAATCAGCTGGGGAATGTGTTCAATTGTACTACTTTTGGAAAAAATTGTGTGTTGACTACAAAACCACTCATCTTAATGTGCTTGACATTAAACAAGAGATTATAGAGCCACATGCCGTGTCAATGACACCATCAGCCATCCATCAAATATCCGCACATTCCGAAATGCGACCGCACGTCTGCGAAATGCCCGATTGTTCGGCGAGCTTCACATCAAGggcggcactgcatggtcacacccgcattcactgtatcggtcgcaataacatgcatcttaacaacaacagcaacaacaccaatggcaaccaccaaatcagcggtggcagcggcggcgtcggcggcggcggcggcggtggcggtggcaacagcatgagcaacggcggccacaacaacggcaacatgaacagcggcccgctgacgaacggccactgcggcagtagcacatcacaaatgacaggtagctcgcatggcttaacagcaaAAGATGATTTTCCCTGCAAGGTGTGCGGCAAAATATTTAATAAAATAAAGAGCCGTAGCGCCCACATGAAGTCCCATCGTCCCATGGAGCAGGAAGTACAGAGTGGCGCCACTTAG
Protein Sequence
MCSASMGAEGSVTLQLREAVQAPESSGSLDATSLTIGYPDSDMLADMLGNIQAAAGDASSPHGATCIQYTNGGDGSKPSSPSSPAGAGNEGLTRQQLDLISQIMQQTKQANAGLTTATGHKQVQRPRTWNMQTQLQQTQSKSSSSSESPTTLITVTASNAPKVEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTEIKKCDKKETPGPPLQTASVGVRALIEEKIINKRSKDLKGAFVIPAPPMLTSRRLSDTDSFVALKTSTANNGSPNHATVVAASDSTTQTTTASTSIVVAQTTNSTINVQAKHQQSISVSPQEVVKDATLIELLKRGTKVAVKRTCSDPGQLSFGVTTAQSQQQQISSSPVATVTHPSSSSLSTPATPNTTPPLAISLSGGNTAPLALTISQAPSDSGDVFTLAYSTDTSSATFFGDNDIYSVSDTAMLLQAVDSIQLLQDTSSPDQMDDMPSLNDYTLSDNSGLNDSASLSSGFTPSRQLQAVLNSPLPESLAEFSALHSKDYVLYGCTNTGSPHTQSSASPLPSPLAYPTPPASHEAVAQASPFLDESHHFTDGNSFFDDKKNINFLEENGAEFFKDPKDEQLTDNERILKLKNELFNDSKSVLERSHFFKTCHNDGMRINVHNERTLADFHHQNLSFLDEPQNYLDDTRNTSSPLSAAFFTATMSSAEEVKEALEEVLPNEENLNGDQPNDIDLYYLPALPLQSQMMPNSDDPLLSSSPKDFSNKPHPHKFDFSAFNPPSVKKQRPNEDKPNQSMEEDQKPQMNQPELTSKINEVFLTPNSICSPPVMTSLTRTNHCSSLLRKRLHKDIMKKHVVYKSKLRQSSCTHYTPTPLLNPDRIAPGLYSSVAHLAEDDVLNFDFTESNCMSEFLDKSKVNIGLDYQATIPPFTESNRLDCYSDDKIQWDPSIVNDEKAVQRFICLAKSSGIPLGCNSEESALKTLMEANGETNIAILSMLQTPNTLPHRQWSTQEIEVFLKGLESRGKDFYRISKEIPTKSAGECVQLYYFWKKLCVDYKTTHLNVLDIKQEIIEPHAVSMTPSAIHQISAHSEMRPHVCEMPDCSASFTSRAALHGHTRIHCIGRNNMHLNNNSNNTNGNHQISGGSGGVGGGGGGGGGNSMSNGGHNNGNMNSGPLTNGHCGSSTSQMTGSSHGLTAKDDFPCKVCGKIFNKIKSRSAHMKSHRPMEQEVQSGAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01382431;
90% Identity
iTF_01383263;
80% Identity
iTF_01383263;